RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 DNAH10Q8IVF4 4471 aa8.54□□□□□ -1.04
DUSP28-202ENST00000405954 KRTAP7-1Q8IUC3 87 aa8.54□□□□□ -1.04
DUSP28-202ENST00000405954 UBE2DNLQ8IWF7 75 aa8.54□□□□□ -1.04
DUSP28-202ENST00000405954 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
DUSP28-202ENST00000405954 KRTAP10-11P60412 298 aa8.52□□□□□ -1.05
DUSP28-202ENST00000405954 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
DUSP28-202ENST00000405954 H3BNG1 76 aa8.49□□□□□ -1.05
DUSP28-202ENST00000405954 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
DUSP28-202ENST00000405954 CIRBP-AS1Q8TBR5 109 aa8.48□□□□□ -1.05
DUSP28-202ENST00000405954 A0A087X002 238 aa8.47□□□□□ -1.05
DUSP28-202ENST00000405954 K7ERS5 55 aa8.47□□□□□ -1.05
DUSP28-202ENST00000405954 DNAH10OSP0CZ25 163 aa8.47□□□□□ -1.05
DUSP28-202ENST00000405954 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
DUSP28-202ENST00000405954 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.05
DUSP28-202ENST00000405954 ROMO1P60602 79 aa8.46□□□□□ -1.06
DUSP28-202ENST00000405954 Q5W150 140 aa8.45□□□□□ -1.06
DUSP28-202ENST00000405954 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
DUSP28-202ENST00000405954 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
DUSP28-202ENST00000405954 ZNF861PO60384 105 aa8.38□□□□□ -1.07
DUSP28-202ENST00000405954 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
DUSP28-202ENST00000405954 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
DUSP28-202ENST00000405954 SPRR1BP22528 89 aa8.35□□□□□ -1.07
DUSP28-202ENST00000405954 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
DUSP28-202ENST00000405954 KRTAP11-1Q8IUC1 163 aa8.35□□□□□ -1.07
DUSP28-202ENST00000405954 DNAH7Q8WXX0 4024 aa8.34□□□□□ -1.07
DUSP28-202ENST00000405954 TGP01266 2768 aa8.33□□□□□ -1.08
DUSP28-202ENST00000405954 Q96NJ1 140 aa8.32□□□□□ -1.08
DUSP28-202ENST00000405954 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
DUSP28-202ENST00000405954 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
DUSP28-202ENST00000405954 Q8N1X5 172 aa8.29□□□□□ -1.08
DUSP28-202ENST00000405954 A8MUU9 505 aa8.24□□□□□ -1.09
DUSP28-202ENST00000405954 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
DUSP28-202ENST00000405954 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
DUSP28-202ENST00000405954 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
DUSP28-202ENST00000405954 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
DUSP28-202ENST00000405954 A0A1B0GU33 70 aa8.19□□□□□ -1.1
DUSP28-202ENST00000405954 DNAH1Q9P2D7 4330 aa8.17□□□□□ -1.1
DUSP28-202ENST00000405954 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
DUSP28-202ENST00000405954 A0A0A0MQY5 61 aa8.16□□□□□ -1.1
DUSP28-202ENST00000405954 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.1
DUSP28-202ENST00000405954 LY6G6CO95867 125 aa8.15□□□□□ -1.1
DUSP28-202ENST00000405954 SPACA4Q8TDM5 124 aa8.14□□□□□ -1.11
DUSP28-202ENST00000405954 DNHD1Q96M86 4753 aa8.14□□□□□ -1.11
DUSP28-202ENST00000405954 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
DUSP28-202ENST00000405954 PANO1I0J062 215 aa8.12□□□□□ -1.11
DUSP28-202ENST00000405954 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
DUSP28-202ENST00000405954 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
DUSP28-202ENST00000405954 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
DUSP28-202ENST00000405954 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
DUSP28-202ENST00000405954 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
DUSP28-202ENST00000405954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
DUSP28-202ENST00000405954 P0C880 135 aa8.06□□□□□ -1.12
DUSP28-202ENST00000405954 A0A0D9SG42 100 aa8.05□□□□□ -1.12
DUSP28-202ENST00000405954 Q6ZSA8 131 aa8.04□□□□□ -1.12
DUSP28-202ENST00000405954 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
DUSP28-202ENST00000405954 H0YAA0 97 aa8.04□□□□□ -1.12
DUSP28-202ENST00000405954 MEGF8Q7Z7M0 2845 aa8.03□□□□□ -1.12
DUSP28-202ENST00000405954 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
DUSP28-202ENST00000405954 KMT2AQ03164 3969 aa8.01□□□□□ -1.13
DUSP28-202ENST00000405954 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
DUSP28-202ENST00000405954 KRTAP13-1Q8IUC0 172 aa7.98□□□□□ -1.13
DUSP28-202ENST00000405954 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
DUSP28-202ENST00000405954 STARD9Q9P2P6 4700 aa7.97□□□□□ -1.13
DUSP28-202ENST00000405954 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
DUSP28-202ENST00000405954 NUPR2A6NF83 97 aa7.97□□□□□ -1.13
DUSP28-202ENST00000405954 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
DUSP28-202ENST00000405954 NBDYA0A0U1RRE5 68 aa7.9□□□□□ -1.14
DUSP28-202ENST00000405954 PRKDCP78527 4128 aaKnown RBP7.9□□□□□ -1.14
DUSP28-202ENST00000405954 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
DUSP28-202ENST00000405954 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
DUSP28-202ENST00000405954 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
DUSP28-202ENST00000405954 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
DUSP28-202ENST00000405954 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
DUSP28-202ENST00000405954 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
DUSP28-202ENST00000405954 DNAH2Q9P225 4427 aa7.82□□□□□ -1.16
DUSP28-202ENST00000405954 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
DUSP28-202ENST00000405954 A0A087WTM6 91 aa7.79□□□□□ -1.16
DUSP28-202ENST00000405954 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
DUSP28-202ENST00000405954 VPS13DQ5THJ4 4388 aa7.77□□□□□ -1.17
DUSP28-202ENST00000405954 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
DUSP28-202ENST00000405954 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
DUSP28-202ENST00000405954 DNAH11Q96DT5 4516 aa7.71□□□□□ -1.17
DUSP28-202ENST00000405954 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
DUSP28-202ENST00000405954 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
DUSP28-202ENST00000405954 DYNC2H1Q8NCM8 4307 aaKnown RBP7.62□□□□□ -1.19
DUSP28-202ENST00000405954 HYDINQ4G0P3 5121 aa7.6□□□□□ -1.19
DUSP28-202ENST00000405954 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
DUSP28-202ENST00000405954 LRP1BQ9NZR2 4599 aa7.59□□□□□ -1.19
DUSP28-202ENST00000405954 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
DUSP28-202ENST00000405954 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
DUSP28-202ENST00000405954 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
DUSP28-202ENST00000405954 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
DUSP28-202ENST00000405954 VPS13BQ7Z7G8 4022 aa7.5□□□□□ -1.21
DUSP28-202ENST00000405954 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
DUSP28-202ENST00000405954 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
DUSP28-202ENST00000405954 S4R3F8 94 aa7.46□□□□□ -1.22
DUSP28-202ENST00000405954 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
DUSP28-202ENST00000405954 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
DUSP28-202ENST00000405954 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
DUSP28-202ENST00000405954 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms