RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 ADGRG4Q8IZF6 3080 aa9.66□□□□□ -0.86
NRXN1-209ENST00000405581 DMXL2Q8TDJ6 3036 aa9.65□□□□□ -0.86
NRXN1-209ENST00000405581 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
NRXN1-209ENST00000405581 APCP25054 2843 aa9.62□□□□□ -0.87
NRXN1-209ENST00000405581 FREM2Q5SZK8 3169 aa9.61□□□□□ -0.87
NRXN1-209ENST00000405581 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
NRXN1-209ENST00000405581 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
NRXN1-209ENST00000405581 BOD1L1Q8NFC6 3051 aa9.6□□□□□ -0.87
NRXN1-209ENST00000405581 A8MU10 97 aa9.6□□□□□ -0.87
NRXN1-209ENST00000405581 LRBAP50851 2863 aa9.59□□□□□ -0.87
NRXN1-209ENST00000405581 NBEAQ8NFP9 2946 aa9.57□□□□□ -0.88
NRXN1-209ENST00000405581 A6NN06 94 aa9.55□□□□□ -0.88
NRXN1-209ENST00000405581 TENM4Q6N022 2769 aa9.54□□□□□ -0.88
NRXN1-209ENST00000405581 TNP1P09430 55 aa9.54□□□□□ -0.88
NRXN1-209ENST00000405581 ZZEF1O43149 2961 aa9.54□□□□□ -0.88
NRXN1-209ENST00000405581 REV3LO60673 3130 aa9.51□□□□□ -0.89
NRXN1-209ENST00000405581 TNRC18O15417 2968 aaPredicted RBP9.5□□□□□ -0.89
NRXN1-209ENST00000405581 EYSQ5T1H1 3165 aa9.5□□□□□ -0.89
NRXN1-209ENST00000405581 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
NRXN1-209ENST00000405581 COL6A3P12111 3177 aa9.45□□□□□ -0.9
NRXN1-209ENST00000405581 MYO15AQ9UKN7 3530 aa9.43□□□□□ -0.9
NRXN1-209ENST00000405581 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
NRXN1-209ENST00000405581 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
NRXN1-209ENST00000405581 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
NRXN1-209ENST00000405581 DCHS2Q6V1P9 2916 aa9.33□□□□□ -0.92
NRXN1-209ENST00000405581 CRYBG3Q68DQ2 2970 aa9.33□□□□□ -0.92
NRXN1-209ENST00000405581 PP632Q6XCG6 107 aa9.33□□□□□ -0.92
NRXN1-209ENST00000405581 DMXL1Q9Y485 3027 aa9.3□□□□□ -0.92
NRXN1-209ENST00000405581 XP32Q5T750 250 aa9.3□□□□□ -0.92
NRXN1-209ENST00000405581 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
NRXN1-209ENST00000405581 HRNRQ86YZ3 2850 aaPredicted RBP9.28□□□□□ -0.92
NRXN1-209ENST00000405581 NDUFAF8A1L188 74 aa9.24□□□□□ -0.93
NRXN1-209ENST00000405581 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
NRXN1-209ENST00000405581 CFAP47Q6ZTR5 3102 aa9.22□□□□□ -0.93
NRXN1-209ENST00000405581 C10orf95Q9H7T3 257 aa9.21□□□□□ -0.94
NRXN1-209ENST00000405581 KRTAP10-8P60410 259 aa9.19□□□□□ -0.94
NRXN1-209ENST00000405581 SPTBN5Q9NRC6 3674 aaKnown RBP9.19□□□□□ -0.94
NRXN1-209ENST00000405581 NF1P21359 2839 aa9.12□□□□□ -0.95
NRXN1-209ENST00000405581 FBN2P35556 2912 aa9.1□□□□□ -0.95
NRXN1-209ENST00000405581 TENM3Q9P273 2699 aa9.06□□□□□ -0.96
NRXN1-209ENST00000405581 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
NRXN1-209ENST00000405581 WDFY3Q8IZQ1 3526 aa9.04□□□□□ -0.96
NRXN1-209ENST00000405581 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
NRXN1-209ENST00000405581 LOC400499M0QZD8 3231 aa9.02□□□□□ -0.97
NRXN1-209ENST00000405581 KRTAP10-10P60014 251 aa9□□□□□ -0.97
NRXN1-209ENST00000405581 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
NRXN1-209ENST00000405581 TENM1Q9UKZ4 2725 aa8.97□□□□□ -0.97
NRXN1-209ENST00000405581 H0YAA0 97 aa8.96□□□□□ -0.98
NRXN1-209ENST00000405581 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.98
NRXN1-209ENST00000405581 P0C880 135 aa8.94□□□□□ -0.98
NRXN1-209ENST00000405581 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
NRXN1-209ENST00000405581 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
NRXN1-209ENST00000405581 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
NRXN1-209ENST00000405581 ASPMQ8IZT6 3477 aa8.8□□□□□ -1
NRXN1-209ENST00000405581 MUC3AQ02505 3323 aa8.73□□□□□ -1.01
NRXN1-209ENST00000405581 PDZD2O15018 2839 aa8.71□□□□□ -1.02
NRXN1-209ENST00000405581 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
NRXN1-209ENST00000405581 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
NRXN1-209ENST00000405581 RELNP78509 3460 aa8.61□□□□□ -1.03
NRXN1-209ENST00000405581 TGP01266 2768 aa8.58□□□□□ -1.04
NRXN1-209ENST00000405581 DMDP11532 3685 aa8.56□□□□□ -1.04
NRXN1-209ENST00000405581 OTOGQ6ZRI0 2925 aa8.49□□□□□ -1.05
NRXN1-209ENST00000405581 VWFP04275 2813 aa8.48□□□□□ -1.05
NRXN1-209ENST00000405581 LAMA5O15230 3695 aa8.47□□□□□ -1.05
NRXN1-209ENST00000405581 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.05
NRXN1-209ENST00000405581 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
NRXN1-209ENST00000405581 FBN1P35555 2871 aaKnown RBP8.4□□□□□ -1.06
NRXN1-209ENST00000405581 SMG1Q96Q15 3661 aaKnown RBP8.37□□□□□ -1.07
NRXN1-209ENST00000405581 CSMD1Q96PZ7 3565 aa8.37□□□□□ -1.07
NRXN1-209ENST00000405581 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
NRXN1-209ENST00000405581 CUBNO60494 3623 aa8.33□□□□□ -1.08
NRXN1-209ENST00000405581 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
NRXN1-209ENST00000405581 SVEP1Q4LDE5 3571 aa8.25□□□□□ -1.09
NRXN1-209ENST00000405581 SPENQ96T58 3664 aaKnown RBP8.25□□□□□ -1.09
NRXN1-209ENST00000405581 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
NRXN1-209ENST00000405581 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
NRXN1-209ENST00000405581 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
NRXN1-209ENST00000405581 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
NRXN1-209ENST00000405581 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
NRXN1-209ENST00000405581 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
NRXN1-209ENST00000405581 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
NRXN1-209ENST00000405581 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
NRXN1-209ENST00000405581 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
NRXN1-209ENST00000405581 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
NRXN1-209ENST00000405581 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
NRXN1-209ENST00000405581 CSMD2Q7Z408 3487 aa7.86□□□□□ -1.15
NRXN1-209ENST00000405581 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
NRXN1-209ENST00000405581 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
NRXN1-209ENST00000405581 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
NRXN1-209ENST00000405581 INE1O15225 51 aa7.72□□□□□ -1.17
NRXN1-209ENST00000405581 HUWE1Q7Z6Z7 4374 aaKnown RBP7.7□□□□□ -1.18
NRXN1-209ENST00000405581 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
NRXN1-209ENST00000405581 BSNQ9UPA5 3926 aa7.64□□□□□ -1.19
NRXN1-209ENST00000405581 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
NRXN1-209ENST00000405581 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
NRXN1-209ENST00000405581 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
NRXN1-209ENST00000405581 CRCT1Q9UGL9 99 aa7.52□□□□□ -1.2
NRXN1-209ENST00000405581 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
NRXN1-209ENST00000405581 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
NRXN1-209ENST00000405581 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms