RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.39
CLIP4-204ENST00000404424 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
CLIP4-204ENST00000404424 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
CLIP4-204ENST00000404424 A0A087X002 238 aa6.34□□□□□ -1.4
CLIP4-204ENST00000404424 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.4
CLIP4-204ENST00000404424 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
CLIP4-204ENST00000404424 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
CLIP4-204ENST00000404424 Q75L30 129 aa6.33□□□□□ -1.4
CLIP4-204ENST00000404424 DNAH2Q9P225 4427 aa6.32□□□□□ -1.4
CLIP4-204ENST00000404424 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
CLIP4-204ENST00000404424 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
CLIP4-204ENST00000404424 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
CLIP4-204ENST00000404424 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
CLIP4-204ENST00000404424 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
CLIP4-204ENST00000404424 HRES1P13985 223 aa6.28□□□□□ -1.4
CLIP4-204ENST00000404424 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
CLIP4-204ENST00000404424 Q5W150 140 aa6.27□□□□□ -1.41
CLIP4-204ENST00000404424 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
CLIP4-204ENST00000404424 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
CLIP4-204ENST00000404424 A6NED7 52 aa6.25□□□□□ -1.41
CLIP4-204ENST00000404424 A8MU10 97 aa6.24□□□□□ -1.41
CLIP4-204ENST00000404424 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
CLIP4-204ENST00000404424 LY6G6CO95867 125 aa6.23□□□□□ -1.41
CLIP4-204ENST00000404424 LINC00313P59037 77 aa6.23□□□□□ -1.41
CLIP4-204ENST00000404424 ATP11AUNQ6ZP68 121 aa6.22□□□□□ -1.41
CLIP4-204ENST00000404424 DNAH11Q96DT5 4516 aa6.22□□□□□ -1.41
CLIP4-204ENST00000404424 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
CLIP4-204ENST00000404424 ACYP2P14621 99 aa6.22□□□□□ -1.41
CLIP4-204ENST00000404424 LCA10Q71F78 164 aa6.22□□□□□ -1.41
CLIP4-204ENST00000404424 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.41
CLIP4-204ENST00000404424 DNAH5Q8TE73 4624 aa6.19□□□□□ -1.42
CLIP4-204ENST00000404424 KRTAP10-2P60368 255 aa6.19□□□□□ -1.42
CLIP4-204ENST00000404424 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
CLIP4-204ENST00000404424 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
CLIP4-204ENST00000404424 Q6ZSA8 131 aa6.18□□□□□ -1.42
CLIP4-204ENST00000404424 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
CLIP4-204ENST00000404424 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
CLIP4-204ENST00000404424 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
CLIP4-204ENST00000404424 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
CLIP4-204ENST00000404424 FBN3Q75N90 2809 aa6.15□□□□□ -1.42
CLIP4-204ENST00000404424 MEGF8Q7Z7M0 2845 aa6.14□□□□□ -1.43
CLIP4-204ENST00000404424 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
CLIP4-204ENST00000404424 SPINK7P58062 85 aa6.13□□□□□ -1.43
CLIP4-204ENST00000404424 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
CLIP4-204ENST00000404424 TGP01266 2768 aa6.12□□□□□ -1.43
CLIP4-204ENST00000404424 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
CLIP4-204ENST00000404424 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
CLIP4-204ENST00000404424 SEC61GP60059 68 aa6.11□□□□□ -1.43
CLIP4-204ENST00000404424 A6NN06 94 aa6.1□□□□□ -1.43
CLIP4-204ENST00000404424 RETNLBQ9BQ08 111 aa6.1□□□□□ -1.43
CLIP4-204ENST00000404424 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
CLIP4-204ENST00000404424 SPINK1P00995 79 aa6.06□□□□□ -1.44
CLIP4-204ENST00000404424 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
CLIP4-204ENST00000404424 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
CLIP4-204ENST00000404424 PKD1P98161 4303 aa6.04□□□□□ -1.44
CLIP4-204ENST00000404424 A0A1B0GU69 56 aa6.04□□□□□ -1.44
CLIP4-204ENST00000404424 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
CLIP4-204ENST00000404424 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
CLIP4-204ENST00000404424 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
CLIP4-204ENST00000404424 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
CLIP4-204ENST00000404424 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
CLIP4-204ENST00000404424 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
CLIP4-204ENST00000404424 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
CLIP4-204ENST00000404424 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
CLIP4-204ENST00000404424 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
CLIP4-204ENST00000404424 UQCR11O14957 56 aa5.96□□□□□ -1.46
CLIP4-204ENST00000404424 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
CLIP4-204ENST00000404424 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
CLIP4-204ENST00000404424 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
CLIP4-204ENST00000404424 Q8N1X5 172 aa5.87□□□□□ -1.47
CLIP4-204ENST00000404424 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
CLIP4-204ENST00000404424 A8MUU9 505 aa5.87□□□□□ -1.47
CLIP4-204ENST00000404424 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-204ENST00000404424 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
CLIP4-204ENST00000404424 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
CLIP4-204ENST00000404424 KRTAP21-3Q3LHN1 58 aa5.81□□□□□ -1.48
CLIP4-204ENST00000404424 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
CLIP4-204ENST00000404424 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
CLIP4-204ENST00000404424 KRTAP10-4P60372 401 aaPredicted RBP5.79□□□□□ -1.48
CLIP4-204ENST00000404424 A0A1B0GVY2 172 aa5.78□□□□□ -1.48
CLIP4-204ENST00000404424 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
CLIP4-204ENST00000404424 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
CLIP4-204ENST00000404424 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CLIP4-204ENST00000404424 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
CLIP4-204ENST00000404424 J3QL48 77 aa5.74□□□□□ -1.49
CLIP4-204ENST00000404424 FAT1Q14517 4588 aa5.72□□□□□ -1.49
CLIP4-204ENST00000404424 A0A1B0GU33 70 aa5.7□□□□□ -1.5
CLIP4-204ENST00000404424 H0YAA0 97 aa5.7□□□□□ -1.5
CLIP4-204ENST00000404424 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
CLIP4-204ENST00000404424 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
CLIP4-204ENST00000404424 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CLIP4-204ENST00000404424 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
CLIP4-204ENST00000404424 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
CLIP4-204ENST00000404424 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
CLIP4-204ENST00000404424 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
CLIP4-204ENST00000404424 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
CLIP4-204ENST00000404424 TNXBP22105 4242 aa5.57□□□□□ -1.52
CLIP4-204ENST00000404424 RYR2Q92736 4967 aa5.57□□□□□ -1.52
CLIP4-204ENST00000404424 K7ERS5 55 aa5.57□□□□□ -1.52
CLIP4-204ENST00000404424 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms