RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 H0YAA0 97 aa11.3□□□□□ -0.6
ANKRD28-201ENST00000399451 ITPR1Q14643 2758 aa11.29□□□□□ -0.6
ANKRD28-201ENST00000399451 TPRXLQ17RH7 258 aa11.27□□□□□ -0.61
ANKRD28-201ENST00000399451 FREM2Q5SZK8 3169 aa11.26□□□□□ -0.61
ANKRD28-201ENST00000399451 APCP25054 2843 aa11.22□□□□□ -0.61
ANKRD28-201ENST00000399451 CRYBG3Q68DQ2 2970 aa11.22□□□□□ -0.61
ANKRD28-201ENST00000399451 LRBAP50851 2863 aa11.18□□□□□ -0.62
ANKRD28-201ENST00000399451 DNAH14Q0VDD8 3507 aa11.16□□□□□ -0.62
ANKRD28-201ENST00000399451 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.62
ANKRD28-201ENST00000399451 PRO2289Q9P1D8 64 aa11.14□□□□□ -0.63
ANKRD28-201ENST00000399451 ATMQ13315 3056 aa11.13□□□□□ -0.63
ANKRD28-201ENST00000399451 VCANP13611 3396 aa11.09□□□□□ -0.63
ANKRD28-201ENST00000399451 COL6A3P12111 3177 aa11.09□□□□□ -0.63
ANKRD28-201ENST00000399451 HIVEP1P15822 2718 aa11.08□□□□□ -0.64
ANKRD28-201ENST00000399451 LAMA1P25391 3075 aa11.08□□□□□ -0.64
ANKRD28-201ENST00000399451 P0C880 135 aa11.07□□□□□ -0.64
ANKRD28-201ENST00000399451 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
ANKRD28-201ENST00000399451 TACC2O95359 2948 aa11.04□□□□□ -0.64
ANKRD28-201ENST00000399451 REV3LO60673 3130 aa11.04□□□□□ -0.64
ANKRD28-201ENST00000399451 ADGRG4Q8IZF6 3080 aa11.02□□□□□ -0.65
ANKRD28-201ENST00000399451 COL12A1Q99715 3063 aa11.01□□□□□ -0.65
ANKRD28-201ENST00000399451 TENM4Q6N022 2769 aa11□□□□□ -0.65
ANKRD28-201ENST00000399451 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
ANKRD28-201ENST00000399451 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
ANKRD28-201ENST00000399451 FLNCQ14315 2725 aa10.96□□□□□ -0.65
ANKRD28-201ENST00000399451 ASH1LQ9NR48 2969 aaKnown RBP10.96□□□□□ -0.66
ANKRD28-201ENST00000399451 DMXL2Q8TDJ6 3036 aa10.95□□□□□ -0.66
ANKRD28-201ENST00000399451 BOD1L1Q8NFC6 3051 aa10.93□□□□□ -0.66
ANKRD28-201ENST00000399451 FRYLO94915 3013 aa10.86□□□□□ -0.67
ANKRD28-201ENST00000399451 NIPBLQ6KC79 2804 aaeCLIP10.82□□□□□ -0.68
ANKRD28-201ENST00000399451 EYSQ5T1H1 3165 aa10.8□□□□□ -0.68
ANKRD28-201ENST00000399451 ZZEF1O43149 2961 aa10.79□□□□□ -0.68
ANKRD28-201ENST00000399451 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
ANKRD28-201ENST00000399451 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.69
ANKRD28-201ENST00000399451 SPTBN5Q9NRC6 3674 aaKnown RBP10.67□□□□□ -0.7
ANKRD28-201ENST00000399451 HRNRQ86YZ3 2850 aaPredicted RBP10.65□□□□□ -0.71
ANKRD28-201ENST00000399451 USP34Q70CQ2 3546 aa10.64□□□□□ -0.71
ANKRD28-201ENST00000399451 KRTAP12-2P59991 146 aa10.62□□□□□ -0.71
ANKRD28-201ENST00000399451 DCHS2Q6V1P9 2916 aa10.61□□□□□ -0.71
ANKRD28-201ENST00000399451 TNRC18O15417 2968 aaPredicted RBP10.53□□□□□ -0.72
ANKRD28-201ENST00000399451 TENM2Q9NT68 2774 aa10.52□□□□□ -0.72
ANKRD28-201ENST00000399451 TENM1Q9UKZ4 2725 aa10.52□□□□□ -0.73
ANKRD28-201ENST00000399451 ZANQ9Y493 2812 aa10.51□□□□□ -0.73
ANKRD28-201ENST00000399451 SPEGQ15772 3267 aa10.48□□□□□ -0.73
ANKRD28-201ENST00000399451 KRTAP13-4Q3LI77 160 aa10.43□□□□□ -0.74
ANKRD28-201ENST00000399451 KRTAP12-1P59990 96 aa10.4□□□□□ -0.74
ANKRD28-201ENST00000399451 TGP01266 2768 aa10.37□□□□□ -0.75
ANKRD28-201ENST00000399451 DMXL1Q9Y485 3027 aa10.35□□□□□ -0.75
ANKRD28-201ENST00000399451 FBN2P35556 2912 aa10.34□□□□□ -0.75
ANKRD28-201ENST00000399451 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
ANKRD28-201ENST00000399451 NF1P21359 2839 aa10.31□□□□□ -0.76
ANKRD28-201ENST00000399451 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
ANKRD28-201ENST00000399451 CELSR1Q9NYQ6 3014 aa10.26□□□□□ -0.77
ANKRD28-201ENST00000399451 LOC400499M0QZD8 3231 aa10.21□□□□□ -0.77
ANKRD28-201ENST00000399451 KRTAP10-6P60371 365 aaPredicted RBP10.05□□□□□ -0.8
ANKRD28-201ENST00000399451 KRTAP15-1Q3LI76 137 aa10.05□□□□□ -0.8
ANKRD28-201ENST00000399451 WDFY3Q8IZQ1 3526 aa10□□□□□ -0.81
ANKRD28-201ENST00000399451 PKD1L1Q8TDX9 2849 aa9.98□□□□□ -0.81
ANKRD28-201ENST00000399451 MYO15AQ9UKN7 3530 aa9.97□□□□□ -0.81
ANKRD28-201ENST00000399451 MXRA5Q9NR99 2828 aa9.96□□□□□ -0.82
ANKRD28-201ENST00000399451 NBPF19A0A087WUL8 3843 aa9.88□□□□□ -0.83
ANKRD28-201ENST00000399451 RELNP78509 3460 aa9.88□□□□□ -0.83
ANKRD28-201ENST00000399451 VWFP04275 2813 aa9.86□□□□□ -0.83
ANKRD28-201ENST00000399451 ASPMQ8IZT6 3477 aa9.84□□□□□ -0.83
ANKRD28-201ENST00000399451 PDZD2O15018 2839 aa9.81□□□□□ -0.84
ANKRD28-201ENST00000399451 DCHS1Q96JQ0 3298 aa9.77□□□□□ -0.85
ANKRD28-201ENST00000399451 ANK3Q12955 4377 aaKnown RBP9.75□□□□□ -0.85
ANKRD28-201ENST00000399451 MT1HL1P0DM35 61 aa9.73□□□□□ -0.85
ANKRD28-201ENST00000399451 CRCT1Q9UGL9 99 aa9.72□□□□□ -0.85
ANKRD28-201ENST00000399451 ZFHX4Q86UP3 3567 aa9.72□□□□□ -0.85
ANKRD28-201ENST00000399451 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
ANKRD28-201ENST00000399451 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
ANKRD28-201ENST00000399451 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
ANKRD28-201ENST00000399451 KRTAP10-12P60413 245 aa9.59□□□□□ -0.87
ANKRD28-201ENST00000399451 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
ANKRD28-201ENST00000399451 INE1O15225 51 aa9.54□□□□□ -0.88
ANKRD28-201ENST00000399451 LAMA5O15230 3695 aa9.48□□□□□ -0.89
ANKRD28-201ENST00000399451 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
ANKRD28-201ENST00000399451 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
ANKRD28-201ENST00000399451 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
ANKRD28-201ENST00000399451 ZFHX3Q15911 3703 aa9.37□□□□□ -0.91
ANKRD28-201ENST00000399451 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
ANKRD28-201ENST00000399451 HUWE1Q7Z6Z7 4374 aaKnown RBP9.35□□□□□ -0.91
ANKRD28-201ENST00000399451 MEGF8Q7Z7M0 2845 aa9.32□□□□□ -0.92
ANKRD28-201ENST00000399451 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
ANKRD28-201ENST00000399451 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.93
ANKRD28-201ENST00000399451 KRTAP12-3P60328 96 aa9.25□□□□□ -0.93
ANKRD28-201ENST00000399451 ALMS1Q8TCU4 4167 aa9.22□□□□□ -0.93
ANKRD28-201ENST00000399451 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
ANKRD28-201ENST00000399451 DMDP11532 3685 aa9.2□□□□□ -0.94
ANKRD28-201ENST00000399451 LCE3AQ5TA76 89 aa9.18□□□□□ -0.94
ANKRD28-201ENST00000399451 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
ANKRD28-201ENST00000399451 TRRAPQ9Y4A5 3859 aa9.13□□□□□ -0.95
ANKRD28-201ENST00000399451 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
ANKRD28-201ENST00000399451 KRTAP8-1Q8IUC2 63 aa9.06□□□□□ -0.96
ANKRD28-201ENST00000399451 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
ANKRD28-201ENST00000399451 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
ANKRD28-201ENST00000399451 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
ANKRD28-201ENST00000399451 BSNQ9UPA5 3926 aa8.92□□□□□ -0.98
ANKRD28-201ENST00000399451 MUC3AQ02505 3323 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms