RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
C4orf3-201ENST00000399075 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
C4orf3-201ENST00000399075 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
C4orf3-201ENST00000399075 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
C4orf3-201ENST00000399075 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
C4orf3-201ENST00000399075 ZNF861PO60384 105 aa6.84□□□□□ -1.31
C4orf3-201ENST00000399075 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
C4orf3-201ENST00000399075 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
C4orf3-201ENST00000399075 TP53AIP1Q9HCN2 124 aa6.82□□□□□ -1.32
C4orf3-201ENST00000399075 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
C4orf3-201ENST00000399075 Q75L30 129 aa6.8□□□□□ -1.32
C4orf3-201ENST00000399075 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
C4orf3-201ENST00000399075 C1orf134Q5TEV5 83 aa6.79□□□□□ -1.32
C4orf3-201ENST00000399075 DNAH2Q9P225 4427 aa6.79□□□□□ -1.32
C4orf3-201ENST00000399075 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
C4orf3-201ENST00000399075 SPINK7P58062 85 aa6.78□□□□□ -1.32
C4orf3-201ENST00000399075 DNHD1Q96M86 4753 aa6.77□□□□□ -1.33
C4orf3-201ENST00000399075 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
C4orf3-201ENST00000399075 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
C4orf3-201ENST00000399075 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
C4orf3-201ENST00000399075 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
C4orf3-201ENST00000399075 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
C4orf3-201ENST00000399075 ANAPC11Q9NYG5 84 aa6.75□□□□□ -1.33
C4orf3-201ENST00000399075 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
C4orf3-201ENST00000399075 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
C4orf3-201ENST00000399075 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
C4orf3-201ENST00000399075 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
C4orf3-201ENST00000399075 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
C4orf3-201ENST00000399075 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
C4orf3-201ENST00000399075 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.34
C4orf3-201ENST00000399075 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
C4orf3-201ENST00000399075 LY6G6CO95867 125 aa6.69□□□□□ -1.34
C4orf3-201ENST00000399075 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
C4orf3-201ENST00000399075 FRAS1Q86XX4 4008 aa6.68□□□□□ -1.34
C4orf3-201ENST00000399075 A0A087X002 238 aa6.67□□□□□ -1.34
C4orf3-201ENST00000399075 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
C4orf3-201ENST00000399075 COA5Q86WW8 74 aa6.67□□□□□ -1.34
C4orf3-201ENST00000399075 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
C4orf3-201ENST00000399075 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
C4orf3-201ENST00000399075 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
C4orf3-201ENST00000399075 TGP01266 2768 aa6.65□□□□□ -1.34
C4orf3-201ENST00000399075 KRTAP10-2P60368 255 aa6.65□□□□□ -1.35
C4orf3-201ENST00000399075 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
C4orf3-201ENST00000399075 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
C4orf3-201ENST00000399075 Q6ZSA8 131 aa6.64□□□□□ -1.35
C4orf3-201ENST00000399075 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
C4orf3-201ENST00000399075 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
C4orf3-201ENST00000399075 DNAH11Q96DT5 4516 aa6.63□□□□□ -1.35
C4orf3-201ENST00000399075 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
C4orf3-201ENST00000399075 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
C4orf3-201ENST00000399075 Q5W150 140 aa6.59□□□□□ -1.35
C4orf3-201ENST00000399075 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
C4orf3-201ENST00000399075 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
C4orf3-201ENST00000399075 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
C4orf3-201ENST00000399075 HRES1P13985 223 aa6.56□□□□□ -1.36
C4orf3-201ENST00000399075 PKD1P98161 4303 aa6.54□□□□□ -1.36
C4orf3-201ENST00000399075 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
C4orf3-201ENST00000399075 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
C4orf3-201ENST00000399075 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
C4orf3-201ENST00000399075 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
C4orf3-201ENST00000399075 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
C4orf3-201ENST00000399075 ACYP2P14621 99 aa6.48□□□□□ -1.37
C4orf3-201ENST00000399075 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
C4orf3-201ENST00000399075 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
C4orf3-201ENST00000399075 ROMO1P60602 79 aa6.46□□□□□ -1.38
C4orf3-201ENST00000399075 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
C4orf3-201ENST00000399075 SPINK1P00995 79 aa6.44□□□□□ -1.38
C4orf3-201ENST00000399075 TYMSOSQ8TAI1 123 aa6.43□□□□□ -1.38
C4orf3-201ENST00000399075 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
C4orf3-201ENST00000399075 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
C4orf3-201ENST00000399075 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
C4orf3-201ENST00000399075 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
C4orf3-201ENST00000399075 P0C880 135 aa6.36□□□□□ -1.39
C4orf3-201ENST00000399075 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
C4orf3-201ENST00000399075 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
C4orf3-201ENST00000399075 IGKV2D-30A0A075B6S6 120 aa6.33□□□□□ -1.4
C4orf3-201ENST00000399075 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
C4orf3-201ENST00000399075 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
C4orf3-201ENST00000399075 A0A1B0GU69 56 aa6.28□□□□□ -1.4
C4orf3-201ENST00000399075 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
C4orf3-201ENST00000399075 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
C4orf3-201ENST00000399075 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
C4orf3-201ENST00000399075 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
C4orf3-201ENST00000399075 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
C4orf3-201ENST00000399075 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
C4orf3-201ENST00000399075 A8MUU9 505 aa6.23□□□□□ -1.41
C4orf3-201ENST00000399075 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
C4orf3-201ENST00000399075 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
C4orf3-201ENST00000399075 UQCR11O14957 56 aa6.22□□□□□ -1.41
C4orf3-201ENST00000399075 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
C4orf3-201ENST00000399075 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
C4orf3-201ENST00000399075 Q8N1X5 172 aa6.17□□□□□ -1.42
C4orf3-201ENST00000399075 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
C4orf3-201ENST00000399075 FAT1Q14517 4588 aa6.15□□□□□ -1.42
C4orf3-201ENST00000399075 RYR2Q92736 4967 aa6.12□□□□□ -1.43
C4orf3-201ENST00000399075 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
C4orf3-201ENST00000399075 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
C4orf3-201ENST00000399075 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
C4orf3-201ENST00000399075 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
C4orf3-201ENST00000399075 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms