RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 DNAH17Q9UFH2 4485 aa15.19■□□□□ 0.02
COL13A1-203ENST00000398969 MRPL34Q9BQ48 92 aaKnown RBP15.18■□□□□ 0.02
COL13A1-203ENST00000398969 COA5Q86WW8 74 aa15.17■□□□□ 0.02
COL13A1-203ENST00000398969 A0A087X002 238 aa15.15■□□□□ 0.02
COL13A1-203ENST00000398969 Q5VV11 94 aa15.15■□□□□ 0.02
COL13A1-203ENST00000398969 NOTCH2NLQ7Z3S9 236 aa15.15■□□□□ 0.02
COL13A1-203ENST00000398969 DNAH6Q9C0G6 4158 aa15.15■□□□□ 0.02
COL13A1-203ENST00000398969 FRAS1Q86XX4 4008 aa15.14■□□□□ 0.01
COL13A1-203ENST00000398969 C1orf195Q5TG92 126 aa15.14■□□□□ 0.01
COL13A1-203ENST00000398969 LIMD2Q9BT23 127 aa15.13■□□□□ 0.01
COL13A1-203ENST00000398969 IGLV7-43P04211 117 aa15.09■□□□□ 0.01
COL13A1-203ENST00000398969 ALMS1Q8TCU4 4167 aa15.08■□□□□ 0
COL13A1-203ENST00000398969 PRR15LQ9BU68 103 aa15.05■□□□□ -0
COL13A1-203ENST00000398969 SPINK6Q6UWN8 80 aa15.04■□□□□ -0
COL13A1-203ENST00000398969 CIRBP-AS1Q8TBR5 109 aa15.01□□□□□ -0.01
COL13A1-203ENST00000398969 CHKB-CPT1BH3BT56 60 aa14.99□□□□□ -0.01
COL13A1-203ENST00000398969 HYDINQ4G0P3 5121 aa14.99□□□□□ -0.01
COL13A1-203ENST00000398969 KRTAP10-2P60368 255 aa14.97□□□□□ -0.01
COL13A1-203ENST00000398969 LOC101927531A0A1B0GV80 90 aa14.95□□□□□ -0.02
COL13A1-203ENST00000398969 A8MU10 97 aa14.95□□□□□ -0.02
COL13A1-203ENST00000398969 Q5W150 140 aa14.94□□□□□ -0.02
COL13A1-203ENST00000398969 DNAH11Q96DT5 4516 aa14.94□□□□□ -0.02
COL13A1-203ENST00000398969 HRES1P13985 223 aa14.92□□□□□ -0.02
COL13A1-203ENST00000398969 KRTAP13-3Q3SY46 172 aa14.92□□□□□ -0.02
COL13A1-203ENST00000398969 Q75L30 129 aa14.92□□□□□ -0.02
COL13A1-203ENST00000398969 DNAH5Q8TE73 4624 aa14.92□□□□□ -0.02
COL13A1-203ENST00000398969 SSBP3-AS1Q7Z2R9 100 aa14.91□□□□□ -0.02
COL13A1-203ENST00000398969 FAT2Q9NYQ8 4349 aa14.86□□□□□ -0.03
COL13A1-203ENST00000398969 SPAG11AQ6PDA7 123 aa14.86□□□□□ -0.03
COL13A1-203ENST00000398969 LINC01558Q9Y6Z2 57 aa14.86□□□□□ -0.03
COL13A1-203ENST00000398969 C8orf87E5RJ46 101 aa14.85□□□□□ -0.03
COL13A1-203ENST00000398969 PKD1P98161 4303 aa14.81□□□□□ -0.04
COL13A1-203ENST00000398969 A6NED7 52 aa14.79□□□□□ -0.04
COL13A1-203ENST00000398969 LCA10Q71F78 164 aa14.77□□□□□ -0.04
COL13A1-203ENST00000398969 KRTAP10-1P60331 282 aa14.77□□□□□ -0.05
COL13A1-203ENST00000398969 SACSQ9NZJ4 4579 aa14.76□□□□□ -0.05
COL13A1-203ENST00000398969 PMAIP1Q13794 54 aa14.76□□□□□ -0.05
COL13A1-203ENST00000398969 Q6ZSA8 131 aa14.76□□□□□ -0.05
COL13A1-203ENST00000398969 KRTAP13-2Q52LG2 175 aa14.75□□□□□ -0.05
COL13A1-203ENST00000398969 LINC00313P59037 77 aa14.74□□□□□ -0.05
COL13A1-203ENST00000398969 PRR26Q8N8Z3 221 aa14.67□□□□□ -0.06
COL13A1-203ENST00000398969 FAM229AH3BQW9 127 aa14.66□□□□□ -0.06
COL13A1-203ENST00000398969 CDC42SE1Q9NRR8 79 aa14.66□□□□□ -0.06
COL13A1-203ENST00000398969 ACYP2P14621 99 aa14.64□□□□□ -0.07
COL13A1-203ENST00000398969 ATP11AUNQ6ZP68 121 aa14.64□□□□□ -0.07
COL13A1-203ENST00000398969 SPTSSBQ8NFR3 76 aa14.64□□□□□ -0.07
COL13A1-203ENST00000398969 RETNLBQ9BQ08 111 aa14.62□□□□□ -0.07
COL13A1-203ENST00000398969 DMAC1Q96GE9 116 aa14.61□□□□□ -0.07
COL13A1-203ENST00000398969 LRP1BQ9NZR2 4599 aa14.6□□□□□ -0.07
COL13A1-203ENST00000398969 SPINK7P58062 85 aa14.58□□□□□ -0.08
COL13A1-203ENST00000398969 KRTAP16-1A8MUX0 517 aa14.58□□□□□ -0.08
COL13A1-203ENST00000398969 IGKV2-30P06310 120 aa14.57□□□□□ -0.08
COL13A1-203ENST00000398969 KRTAP1-4P0C5Y4 121 aa14.57□□□□□ -0.08
COL13A1-203ENST00000398969 SEC61GP60059 68 aa14.53□□□□□ -0.08
COL13A1-203ENST00000398969 PKHD1P08F94 4074 aa14.49□□□□□ -0.09
COL13A1-203ENST00000398969 A6NN06 94 aa14.46□□□□□ -0.09
COL13A1-203ENST00000398969 A0A1B0GVY2 172 aa14.41□□□□□ -0.1
COL13A1-203ENST00000398969 KTN1-AS1Q86SY8 53 aa14.41□□□□□ -0.1
COL13A1-203ENST00000398969 VPS13BQ7Z7G8 4022 aa14.4□□□□□ -0.1
COL13A1-203ENST00000398969 RYR2Q92736 4967 aa14.39□□□□□ -0.11
COL13A1-203ENST00000398969 PLA2G1BP04054 148 aaKnown RBP14.38□□□□□ -0.11
COL13A1-203ENST00000398969 C4orf48Q5BLP8 95 aa14.37□□□□□ -0.11
COL13A1-203ENST00000398969 KMT2CQ8NEZ4 4911 aaKnown RBP14.36□□□□□ -0.11
COL13A1-203ENST00000398969 IGKV2D-30A0A075B6S6 120 aa14.36□□□□□ -0.11
COL13A1-203ENST00000398969 TYMSOSQ8TAI1 123 aa14.35□□□□□ -0.11
COL13A1-203ENST00000398969 DYNC1H1Q14204 4646 aaKnown RBP14.35□□□□□ -0.11
COL13A1-203ENST00000398969 SPINK1P00995 79 aa14.32□□□□□ -0.12
COL13A1-203ENST00000398969 A0A1B0GU69 56 aa14.29□□□□□ -0.12
COL13A1-203ENST00000398969 C7orf65Q6ZTY9 151 aa14.22□□□□□ -0.13
COL13A1-203ENST00000398969 SMR3BP02814 79 aaPredicted RBP14.21□□□□□ -0.14
COL13A1-203ENST00000398969 APOBP04114 4563 aaKnown RBP14.18□□□□□ -0.14
COL13A1-203ENST00000398969 LINC00304Q8N9R0 145 aa14.16□□□□□ -0.14
COL13A1-203ENST00000398969 RPS29P62273 56 aaKnown RBP14.13□□□□□ -0.15
COL13A1-203ENST00000398969 SPATA8Q6RVD6 105 aa14.1□□□□□ -0.15
COL13A1-203ENST00000398969 FAT1Q14517 4588 aa14.09□□□□□ -0.15
COL13A1-203ENST00000398969 RBM12B-AS1Q9P1G2 102 aa14.07□□□□□ -0.16
COL13A1-203ENST00000398969 KRTAP10-4P60372 401 aaPredicted RBP14.05□□□□□ -0.16
COL13A1-203ENST00000398969 UQCR11O14957 56 aa14.04□□□□□ -0.16
COL13A1-203ENST00000398969 Q8N1X5 172 aa14.03□□□□□ -0.16
COL13A1-203ENST00000398969 MIR22HGQ0VDD5 57 aa14.01□□□□□ -0.17
COL13A1-203ENST00000398969 RYR3Q15413 4870 aa13.98□□□□□ -0.17
COL13A1-203ENST00000398969 C9orf92A6NGG3 77 aa13.9□□□□□ -0.18
COL13A1-203ENST00000398969 A8MUU9 505 aa13.89□□□□□ -0.19
COL13A1-203ENST00000398969 C20orf166-AS1Q96NR2 134 aa13.89□□□□□ -0.19
COL13A1-203ENST00000398969 PKHD1L1Q86WI1 4243 aa13.8□□□□□ -0.2
COL13A1-203ENST00000398969 PRAC1Q96KF2 57 aa13.78□□□□□ -0.2
COL13A1-203ENST00000398969 ADM2Q7Z4H4 148 aa13.76□□□□□ -0.21
COL13A1-203ENST00000398969 HSPG2P98160 4391 aa13.75□□□□□ -0.21
COL13A1-203ENST00000398969 KRTAP3-1Q9BYR8 98 aa13.74□□□□□ -0.21
COL13A1-203ENST00000398969 Q5VSD8 79 aa13.69□□□□□ -0.22
COL13A1-203ENST00000398969 RYR1P21817 5038 aa13.65□□□□□ -0.22
COL13A1-203ENST00000398969 H0YAA0 97 aa13.57□□□□□ -0.24
COL13A1-203ENST00000398969 KRTAP17-1Q9BYP8 105 aa13.57□□□□□ -0.24
COL13A1-203ENST00000398969 LRP1Q07954 4544 aaKnown RBP13.55□□□□□ -0.24
COL13A1-203ENST00000398969 KIAA1109Q2LD37 5005 aa13.53□□□□□ -0.24
COL13A1-203ENST00000398969 KRTAP10-8P60410 259 aa13.5□□□□□ -0.25
COL13A1-203ENST00000398969 A0A1B0GU33 70 aa13.49□□□□□ -0.25
COL13A1-203ENST00000398969 COX6B2Q6YFQ2 88 aa13.48□□□□□ -0.25
COL13A1-203ENST00000398969 TNXBP22105 4242 aa13.48□□□□□ -0.25
COL13A1-203ENST00000398969 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms