RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
MCF2L-208ENST00000397030 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
MCF2L-208ENST00000397030 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
MCF2L-208ENST00000397030 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
MCF2L-208ENST00000397030 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
MCF2L-208ENST00000397030 NOTCH1P46531 2555 aa9.15□□□□□ -0.95
MCF2L-208ENST00000397030 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
MCF2L-208ENST00000397030 WDFY3Q8IZQ1 3526 aa9.12□□□□□ -0.95
MCF2L-208ENST00000397030 ZNF292O60281 2723 aa9.11□□□□□ -0.95
MCF2L-208ENST00000397030 P0C880 135 aa9.11□□□□□ -0.95
MCF2L-208ENST00000397030 IGSF10Q6WRI0 2623 aa9.06□□□□□ -0.96
MCF2L-208ENST00000397030 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
MCF2L-208ENST00000397030 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.97
MCF2L-208ENST00000397030 BOD1L1Q8NFC6 3051 aa9.01□□□□□ -0.97
MCF2L-208ENST00000397030 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
MCF2L-208ENST00000397030 KALRNO60229 2985 aa8.96□□□□□ -0.97
MCF2L-208ENST00000397030 FRYLO94915 3013 aa8.96□□□□□ -0.98
MCF2L-208ENST00000397030 LRBAP50851 2863 aa8.93□□□□□ -0.98
MCF2L-208ENST00000397030 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
MCF2L-208ENST00000397030 NSD1Q96L73 2696 aaPredicted RBP8.91□□□□□ -0.98
MCF2L-208ENST00000397030 KMT2BQ9UMN6 2715 aaPredicted RBP8.9□□□□□ -0.98
MCF2L-208ENST00000397030 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
MCF2L-208ENST00000397030 ATMQ13315 3056 aa8.9□□□□□ -0.98
MCF2L-208ENST00000397030 H0YAA0 97 aa8.86□□□□□ -0.99
MCF2L-208ENST00000397030 TRANK1O15050 2925 aa8.86□□□□□ -0.99
MCF2L-208ENST00000397030 MAP1AP78559 2803 aaPredicted RBP8.86□□□□□ -0.99
MCF2L-208ENST00000397030 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
MCF2L-208ENST00000397030 LOC400499M0QZD8 3231 aa8.78□□□□□ -1
MCF2L-208ENST00000397030 APCP25054 2843 aa8.77□□□□□ -1.01
MCF2L-208ENST00000397030 UTP20O75691 2785 aaKnown RBP8.76□□□□□ -1.01
MCF2L-208ENST00000397030 ITPR1Q14643 2758 aa8.75□□□□□ -1.01
MCF2L-208ENST00000397030 HIVEP1P15822 2718 aa8.75□□□□□ -1.01
MCF2L-208ENST00000397030 ADGRG4Q8IZF6 3080 aa8.74□□□□□ -1.01
MCF2L-208ENST00000397030 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
MCF2L-208ENST00000397030 TACC2O95359 2948 aa8.73□□□□□ -1.01
MCF2L-208ENST00000397030 LAMA5O15230 3695 aa8.72□□□□□ -1.01
MCF2L-208ENST00000397030 ZFHX4Q86UP3 3567 aa8.72□□□□□ -1.01
MCF2L-208ENST00000397030 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
MCF2L-208ENST00000397030 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
MCF2L-208ENST00000397030 COL12A1Q99715 3063 aa8.65□□□□□ -1.03
MCF2L-208ENST00000397030 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
MCF2L-208ENST00000397030 NBEAQ8NFP9 2946 aa8.58□□□□□ -1.04
MCF2L-208ENST00000397030 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
MCF2L-208ENST00000397030 RELNP78509 3460 aa8.56□□□□□ -1.04
MCF2L-208ENST00000397030 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
MCF2L-208ENST00000397030 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
MCF2L-208ENST00000397030 TNRC18O15417 2968 aaPredicted RBP8.5□□□□□ -1.05
MCF2L-208ENST00000397030 ZZEF1O43149 2961 aa8.5□□□□□ -1.05
MCF2L-208ENST00000397030 TENM2Q9NT68 2774 aa8.47□□□□□ -1.05
MCF2L-208ENST00000397030 DMDP11532 3685 aa8.47□□□□□ -1.05
MCF2L-208ENST00000397030 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
MCF2L-208ENST00000397030 FLNCQ14315 2725 aa8.38□□□□□ -1.07
MCF2L-208ENST00000397030 KRTAP13-4Q3LI77 160 aa8.36□□□□□ -1.07
MCF2L-208ENST00000397030 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
MCF2L-208ENST00000397030 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
MCF2L-208ENST00000397030 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
MCF2L-208ENST00000397030 SMG1Q96Q15 3661 aaKnown RBP8.25□□□□□ -1.09
MCF2L-208ENST00000397030 DCHS2Q6V1P9 2916 aa8.24□□□□□ -1.09
MCF2L-208ENST00000397030 KRTAP12-1P59990 96 aa8.21□□□□□ -1.09
MCF2L-208ENST00000397030 SVEP1Q4LDE5 3571 aa8.21□□□□□ -1.1
MCF2L-208ENST00000397030 CUBNO60494 3623 aa8.16□□□□□ -1.1
MCF2L-208ENST00000397030 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
MCF2L-208ENST00000397030 CELSR1Q9NYQ6 3014 aa8.06□□□□□ -1.12
MCF2L-208ENST00000397030 NIPBLQ6KC79 2804 aaeCLIP8.06□□□□□ -1.12
MCF2L-208ENST00000397030 NF1P21359 2839 aa8.05□□□□□ -1.12
MCF2L-208ENST00000397030 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
MCF2L-208ENST00000397030 TGP01266 2768 aa8.03□□□□□ -1.12
MCF2L-208ENST00000397030 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
MCF2L-208ENST00000397030 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
MCF2L-208ENST00000397030 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
MCF2L-208ENST00000397030 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
MCF2L-208ENST00000397030 PKD1L1Q8TDX9 2849 aa7.94□□□□□ -1.14
MCF2L-208ENST00000397030 FBN2P35556 2912 aa7.93□□□□□ -1.14
MCF2L-208ENST00000397030 VWFP04275 2813 aa7.9□□□□□ -1.14
MCF2L-208ENST00000397030 HRNRQ86YZ3 2850 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-208ENST00000397030 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
MCF2L-208ENST00000397030 MUC3AQ02505 3323 aa7.86□□□□□ -1.15
MCF2L-208ENST00000397030 ZANQ9Y493 2812 aa7.84□□□□□ -1.15
MCF2L-208ENST00000397030 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
MCF2L-208ENST00000397030 PDZD2O15018 2839 aa7.73□□□□□ -1.17
MCF2L-208ENST00000397030 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-208ENST00000397030 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.18
MCF2L-208ENST00000397030 BSNQ9UPA5 3926 aa7.68□□□□□ -1.18
MCF2L-208ENST00000397030 VPS13CQ709C8 3753 aa7.66□□□□□ -1.18
MCF2L-208ENST00000397030 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
MCF2L-208ENST00000397030 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
MCF2L-208ENST00000397030 MXRA5Q9NR99 2828 aa7.59□□□□□ -1.19
MCF2L-208ENST00000397030 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
MCF2L-208ENST00000397030 ALMS1Q8TCU4 4167 aa7.56□□□□□ -1.2
MCF2L-208ENST00000397030 TRRAPQ9Y4A5 3859 aa7.54□□□□□ -1.2
MCF2L-208ENST00000397030 CSMD3Q7Z407 3707 aa7.54□□□□□ -1.2
MCF2L-208ENST00000397030 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
MCF2L-208ENST00000397030 HUWE1Q7Z6Z7 4374 aaKnown RBP7.48□□□□□ -1.21
MCF2L-208ENST00000397030 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
MCF2L-208ENST00000397030 INE1O15225 51 aa7.4□□□□□ -1.22
MCF2L-208ENST00000397030 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
MCF2L-208ENST00000397030 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
MCF2L-208ENST00000397030 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
MCF2L-208ENST00000397030 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
MCF2L-208ENST00000397030 AKAP9Q99996 3911 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms