RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 H0Y9P7 68 aa8.71□□□□□ -1.01
CBX3-202ENST00000396386 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.01
CBX3-202ENST00000396386 H3BPC8 53 aa8.7□□□□□ -1.02
CBX3-202ENST00000396386 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
CBX3-202ENST00000396386 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
CBX3-202ENST00000396386 OXTP01178 125 aa8.68□□□□□ -1.02
CBX3-202ENST00000396386 Q5XG85 94 aa8.68□□□□□ -1.02
CBX3-202ENST00000396386 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
CBX3-202ENST00000396386 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
CBX3-202ENST00000396386 LINC00208Q96KT6 92 aa8.67□□□□□ -1.02
CBX3-202ENST00000396386 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
CBX3-202ENST00000396386 PLA2G1BP04054 148 aaKnown RBP8.66□□□□□ -1.02
CBX3-202ENST00000396386 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
CBX3-202ENST00000396386 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
CBX3-202ENST00000396386 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
CBX3-202ENST00000396386 NDUFS5O43920 106 aa8.64□□□□□ -1.03
CBX3-202ENST00000396386 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
CBX3-202ENST00000396386 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
CBX3-202ENST00000396386 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
CBX3-202ENST00000396386 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
CBX3-202ENST00000396386 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
CBX3-202ENST00000396386 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
CBX3-202ENST00000396386 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
CBX3-202ENST00000396386 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
CBX3-202ENST00000396386 RYR1P21817 5038 aa8.58□□□□□ -1.04
CBX3-202ENST00000396386 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
CBX3-202ENST00000396386 SPINK1P00995 79 aa8.56□□□□□ -1.04
CBX3-202ENST00000396386 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
CBX3-202ENST00000396386 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
CBX3-202ENST00000396386 LINC00313P59037 77 aa8.54□□□□□ -1.04
CBX3-202ENST00000396386 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
CBX3-202ENST00000396386 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
CBX3-202ENST00000396386 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
CBX3-202ENST00000396386 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
CBX3-202ENST00000396386 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
CBX3-202ENST00000396386 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
CBX3-202ENST00000396386 PRR4Q16378 134 aa8.51□□□□□ -1.05
CBX3-202ENST00000396386 SPAG11AQ6PDA7 123 aa8.51□□□□□ -1.05
CBX3-202ENST00000396386 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
CBX3-202ENST00000396386 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
CBX3-202ENST00000396386 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
CBX3-202ENST00000396386 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.06
CBX3-202ENST00000396386 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
CBX3-202ENST00000396386 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
CBX3-202ENST00000396386 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
CBX3-202ENST00000396386 Q5W150 140 aa8.45□□□□□ -1.06
CBX3-202ENST00000396386 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
CBX3-202ENST00000396386 FP248Q71RG6 208 aaPredicted RBP8.43□□□□□ -1.06
CBX3-202ENST00000396386 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
CBX3-202ENST00000396386 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
CBX3-202ENST00000396386 HSPG2P98160 4391 aa8.39□□□□□ -1.07
CBX3-202ENST00000396386 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.07
CBX3-202ENST00000396386 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
CBX3-202ENST00000396386 Q5VSD8 79 aa8.32□□□□□ -1.08
CBX3-202ENST00000396386 FAT1Q14517 4588 aa8.32□□□□□ -1.08
CBX3-202ENST00000396386 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
CBX3-202ENST00000396386 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CBX3-202ENST00000396386 COA5Q86WW8 74 aa8.31□□□□□ -1.08
CBX3-202ENST00000396386 Q1T7F1 81 aa8.27□□□□□ -1.09
CBX3-202ENST00000396386 HRES1P13985 223 aa8.25□□□□□ -1.09
CBX3-202ENST00000396386 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
CBX3-202ENST00000396386 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
CBX3-202ENST00000396386 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
CBX3-202ENST00000396386 V9GYY9 64 aa8.22□□□□□ -1.09
CBX3-202ENST00000396386 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
CBX3-202ENST00000396386 Q8N1X5 172 aa8.2□□□□□ -1.1
CBX3-202ENST00000396386 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
CBX3-202ENST00000396386 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
CBX3-202ENST00000396386 A8MUU9 505 aa8.19□□□□□ -1.1
CBX3-202ENST00000396386 HERC1Q15751 4861 aa8.19□□□□□ -1.1
CBX3-202ENST00000396386 ACYP2P14621 99 aa8.17□□□□□ -1.1
CBX3-202ENST00000396386 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
CBX3-202ENST00000396386 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
CBX3-202ENST00000396386 PSPHP1O15172 72 aa8.13□□□□□ -1.11
CBX3-202ENST00000396386 A8MUN3 132 aa8.09□□□□□ -1.11
CBX3-202ENST00000396386 CHKB-CPT1BH3BT56 60 aa8.09□□□□□ -1.12
CBX3-202ENST00000396386 Q75L30 129 aa8.07□□□□□ -1.12
CBX3-202ENST00000396386 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
CBX3-202ENST00000396386 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
CBX3-202ENST00000396386 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
CBX3-202ENST00000396386 TNXBP22105 4242 aa8.05□□□□□ -1.12
CBX3-202ENST00000396386 Q5VV11 94 aa8.05□□□□□ -1.12
CBX3-202ENST00000396386 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
CBX3-202ENST00000396386 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
CBX3-202ENST00000396386 BRK1Q8WUW1 75 aa8.04□□□□□ -1.12
CBX3-202ENST00000396386 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.12
CBX3-202ENST00000396386 MT1HL1P0DM35 61 aa8.02□□□□□ -1.12
CBX3-202ENST00000396386 PRO0628Q9UI54 55 aa8□□□□□ -1.13
CBX3-202ENST00000396386 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
CBX3-202ENST00000396386 SPINK7P58062 85 aa7.97□□□□□ -1.13
CBX3-202ENST00000396386 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
CBX3-202ENST00000396386 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
CBX3-202ENST00000396386 XP32Q5T750 250 aa7.92□□□□□ -1.14
CBX3-202ENST00000396386 A6NED7 52 aa7.88□□□□□ -1.15
CBX3-202ENST00000396386 A0A1B0GU69 56 aa7.84□□□□□ -1.15
CBX3-202ENST00000396386 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
CBX3-202ENST00000396386 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
CBX3-202ENST00000396386 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
CBX3-202ENST00000396386 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
CBX3-202ENST00000396386 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 966.6 ms