RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 A0A087X002 238 aa9.34□□□□□ -0.91
HOXA3-202ENST00000396352 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
HOXA3-202ENST00000396352 A8MU10 97 aa9.32□□□□□ -0.92
HOXA3-202ENST00000396352 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
HOXA3-202ENST00000396352 NDUFS5O43920 106 aa9.32□□□□□ -0.92
HOXA3-202ENST00000396352 CDK2AP2O75956 126 aa9.3□□□□□ -0.92
HOXA3-202ENST00000396352 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
HOXA3-202ENST00000396352 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
HOXA3-202ENST00000396352 ALMS1Q8TCU4 4167 aa9.26□□□□□ -0.93
HOXA3-202ENST00000396352 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
HOXA3-202ENST00000396352 MEGF8Q7Z7M0 2845 aa9.25□□□□□ -0.93
HOXA3-202ENST00000396352 Q75L30 129 aa9.24□□□□□ -0.93
HOXA3-202ENST00000396352 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
HOXA3-202ENST00000396352 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
HOXA3-202ENST00000396352 HRES1P13985 223 aa9.22□□□□□ -0.93
HOXA3-202ENST00000396352 SPINK6Q6UWN8 80 aa9.21□□□□□ -0.93
HOXA3-202ENST00000396352 Q5W150 140 aa9.21□□□□□ -0.94
HOXA3-202ENST00000396352 TGP01266 2768 aa9.2□□□□□ -0.94
HOXA3-202ENST00000396352 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
HOXA3-202ENST00000396352 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
HOXA3-202ENST00000396352 SPAG11AQ6PDA7 123 aa9.18□□□□□ -0.94
HOXA3-202ENST00000396352 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
HOXA3-202ENST00000396352 LCA10Q71F78 164 aa9.17□□□□□ -0.94
HOXA3-202ENST00000396352 PMAIP1Q13794 54 aa9.16□□□□□ -0.94
HOXA3-202ENST00000396352 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
HOXA3-202ENST00000396352 DNAH11Q96DT5 4516 aa9.15□□□□□ -0.94
HOXA3-202ENST00000396352 A6NED7 52 aa9.13□□□□□ -0.95
HOXA3-202ENST00000396352 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
HOXA3-202ENST00000396352 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
HOXA3-202ENST00000396352 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
HOXA3-202ENST00000396352 CDC42SE1Q9NRR8 79 aa9.07□□□□□ -0.96
HOXA3-202ENST00000396352 ATP11AUNQ6ZP68 121 aa9.06□□□□□ -0.96
HOXA3-202ENST00000396352 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
HOXA3-202ENST00000396352 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
HOXA3-202ENST00000396352 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
HOXA3-202ENST00000396352 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
HOXA3-202ENST00000396352 LY6G6CO95867 125 aa9.03□□□□□ -0.96
HOXA3-202ENST00000396352 LINC00313P59037 77 aa9.03□□□□□ -0.96
HOXA3-202ENST00000396352 SEC61GP60059 68 aa9.03□□□□□ -0.96
HOXA3-202ENST00000396352 SPINK7P58062 85 aa9.03□□□□□ -0.96
HOXA3-202ENST00000396352 PKD1P98161 4303 aa9.02□□□□□ -0.96
HOXA3-202ENST00000396352 ACYP2P14621 99 aa9□□□□□ -0.97
HOXA3-202ENST00000396352 DMAC1Q96GE9 116 aa9□□□□□ -0.97
HOXA3-202ENST00000396352 FAM229AH3BQW9 127 aa8.99□□□□□ -0.97
HOXA3-202ENST00000396352 LRP1BQ9NZR2 4599 aa8.99□□□□□ -0.97
HOXA3-202ENST00000396352 A6NN06 94 aa8.99□□□□□ -0.97
HOXA3-202ENST00000396352 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
HOXA3-202ENST00000396352 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
HOXA3-202ENST00000396352 Q6ZSA8 131 aa8.97□□□□□ -0.97
HOXA3-202ENST00000396352 IGKV2-30P06310 120 aa8.96□□□□□ -0.98
HOXA3-202ENST00000396352 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
HOXA3-202ENST00000396352 DNHD1Q96M86 4753 aa8.95□□□□□ -0.98
HOXA3-202ENST00000396352 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
HOXA3-202ENST00000396352 KRTAP10-1P60331 282 aa8.94□□□□□ -0.98
HOXA3-202ENST00000396352 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
HOXA3-202ENST00000396352 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
HOXA3-202ENST00000396352 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.99
HOXA3-202ENST00000396352 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
HOXA3-202ENST00000396352 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
HOXA3-202ENST00000396352 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
HOXA3-202ENST00000396352 A0A1B0GU69 56 aa8.8□□□□□ -1
HOXA3-202ENST00000396352 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
HOXA3-202ENST00000396352 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
HOXA3-202ENST00000396352 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
HOXA3-202ENST00000396352 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
HOXA3-202ENST00000396352 SPINK1P00995 79 aa8.75□□□□□ -1.01
HOXA3-202ENST00000396352 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
HOXA3-202ENST00000396352 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
HOXA3-202ENST00000396352 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
HOXA3-202ENST00000396352 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
HOXA3-202ENST00000396352 H3BS24 57 aa8.7□□□□□ -1.02
HOXA3-202ENST00000396352 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.02
HOXA3-202ENST00000396352 UQCR11O14957 56 aa8.65□□□□□ -1.02
HOXA3-202ENST00000396352 MIR22HGQ0VDD5 57 aa8.65□□□□□ -1.03
HOXA3-202ENST00000396352 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
HOXA3-202ENST00000396352 RPS29P62273 56 aaKnown RBP8.64□□□□□ -1.03
HOXA3-202ENST00000396352 Q8N1X5 172 aa8.62□□□□□ -1.03
HOXA3-202ENST00000396352 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
HOXA3-202ENST00000396352 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
HOXA3-202ENST00000396352 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
HOXA3-202ENST00000396352 DYNC1H1Q14204 4646 aaKnown RBP8.52□□□□□ -1.04
HOXA3-202ENST00000396352 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
HOXA3-202ENST00000396352 A8MUU9 505 aa8.51□□□□□ -1.05
HOXA3-202ENST00000396352 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
HOXA3-202ENST00000396352 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
HOXA3-202ENST00000396352 SMR3BP02814 79 aaPredicted RBP8.51□□□□□ -1.05
HOXA3-202ENST00000396352 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
HOXA3-202ENST00000396352 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
HOXA3-202ENST00000396352 FAT1Q14517 4588 aa8.46□□□□□ -1.06
HOXA3-202ENST00000396352 A0A1B0GVY2 172 aa8.4□□□□□ -1.07
HOXA3-202ENST00000396352 H0YAA0 97 aa8.4□□□□□ -1.07
HOXA3-202ENST00000396352 A0A1B0GU33 70 aa8.3□□□□□ -1.08
HOXA3-202ENST00000396352 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
HOXA3-202ENST00000396352 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
HOXA3-202ENST00000396352 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
HOXA3-202ENST00000396352 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
HOXA3-202ENST00000396352 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
HOXA3-202ENST00000396352 RYR2Q92736 4967 aa8.23□□□□□ -1.09
HOXA3-202ENST00000396352 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
HOXA3-202ENST00000396352 TNXBP22105 4242 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms