RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
SIN3A-203ENST00000394949 CELSR2Q9HCU4 2923 aa9.57□□□□□ -0.88
SIN3A-203ENST00000394949 NDUFAF8A1L188 74 aa9.56□□□□□ -0.88
SIN3A-203ENST00000394949 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
SIN3A-203ENST00000394949 LAMA1P25391 3075 aa9.53□□□□□ -0.88
SIN3A-203ENST00000394949 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.88
SIN3A-203ENST00000394949 A8MUU9 505 aa9.52□□□□□ -0.89
SIN3A-203ENST00000394949 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
SIN3A-203ENST00000394949 LRBAP50851 2863 aa9.51□□□□□ -0.89
SIN3A-203ENST00000394949 ZZEF1O43149 2961 aa9.49□□□□□ -0.89
SIN3A-203ENST00000394949 DNAH14Q0VDD8 3507 aa9.47□□□□□ -0.89
SIN3A-203ENST00000394949 BOD1L1Q8NFC6 3051 aa9.46□□□□□ -0.9
SIN3A-203ENST00000394949 C20orf166-AS1Q96NR2 134 aa9.43□□□□□ -0.9
SIN3A-203ENST00000394949 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
SIN3A-203ENST00000394949 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
SIN3A-203ENST00000394949 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
SIN3A-203ENST00000394949 CELSR3Q9NYQ7 3312 aa9.39□□□□□ -0.91
SIN3A-203ENST00000394949 ZANQ9Y493 2812 aa9.39□□□□□ -0.91
SIN3A-203ENST00000394949 CRYBG3Q68DQ2 2970 aa9.37□□□□□ -0.91
SIN3A-203ENST00000394949 H0YAA0 97 aa9.3□□□□□ -0.92
SIN3A-203ENST00000394949 VCANP13611 3396 aa9.28□□□□□ -0.92
SIN3A-203ENST00000394949 TENM1Q9UKZ4 2725 aa9.22□□□□□ -0.93
SIN3A-203ENST00000394949 PP632Q6XCG6 107 aa9.2□□□□□ -0.94
SIN3A-203ENST00000394949 EYSQ5T1H1 3165 aa9.19□□□□□ -0.94
SIN3A-203ENST00000394949 NF1P21359 2839 aa9.19□□□□□ -0.94
SIN3A-203ENST00000394949 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
SIN3A-203ENST00000394949 TNP1P09430 55 aa9.17□□□□□ -0.94
SIN3A-203ENST00000394949 SZT2Q5T011 3432 aa9.17□□□□□ -0.94
SIN3A-203ENST00000394949 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
SIN3A-203ENST00000394949 P0C880 135 aa9.1□□□□□ -0.95
SIN3A-203ENST00000394949 CFAP47Q6ZTR5 3102 aa9.1□□□□□ -0.95
SIN3A-203ENST00000394949 COL6A3P12111 3177 aa9.1□□□□□ -0.95
SIN3A-203ENST00000394949 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
SIN3A-203ENST00000394949 FBN2P35556 2912 aa9.07□□□□□ -0.96
SIN3A-203ENST00000394949 XP32Q5T750 250 aa9.02□□□□□ -0.97
SIN3A-203ENST00000394949 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
SIN3A-203ENST00000394949 SPEGQ15772 3267 aa8.99□□□□□ -0.97
SIN3A-203ENST00000394949 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
SIN3A-203ENST00000394949 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
SIN3A-203ENST00000394949 MXRA5Q9NR99 2828 aa8.91□□□□□ -0.98
SIN3A-203ENST00000394949 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
SIN3A-203ENST00000394949 DMXL1Q9Y485 3027 aa8.9□□□□□ -0.98
SIN3A-203ENST00000394949 PKD1L1Q8TDX9 2849 aa8.9□□□□□ -0.99
SIN3A-203ENST00000394949 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
SIN3A-203ENST00000394949 CELSR1Q9NYQ6 3014 aa8.81□□□□□ -1
SIN3A-203ENST00000394949 USP34Q70CQ2 3546 aa8.81□□□□□ -1
SIN3A-203ENST00000394949 KRTAP10-8P60410 259 aa8.79□□□□□ -1
SIN3A-203ENST00000394949 TGP01266 2768 aa8.77□□□□□ -1
SIN3A-203ENST00000394949 PDZD2O15018 2839 aa8.76□□□□□ -1.01
SIN3A-203ENST00000394949 MYO15AQ9UKN7 3530 aa8.72□□□□□ -1.01
SIN3A-203ENST00000394949 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
SIN3A-203ENST00000394949 VWFP04275 2813 aa8.67□□□□□ -1.02
SIN3A-203ENST00000394949 LOC400499M0QZD8 3231 aa8.64□□□□□ -1.03
SIN3A-203ENST00000394949 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
SIN3A-203ENST00000394949 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
SIN3A-203ENST00000394949 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
SIN3A-203ENST00000394949 KRTAP12-1P59990 96 aa8.52□□□□□ -1.05
SIN3A-203ENST00000394949 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
SIN3A-203ENST00000394949 DCHS1Q96JQ0 3298 aa8.5□□□□□ -1.05
SIN3A-203ENST00000394949 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
SIN3A-203ENST00000394949 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
SIN3A-203ENST00000394949 WDFY3Q8IZQ1 3526 aa8.46□□□□□ -1.06
SIN3A-203ENST00000394949 FBN1P35555 2871 aaKnown RBP8.4□□□□□ -1.06
SIN3A-203ENST00000394949 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
SIN3A-203ENST00000394949 ZFHX4Q86UP3 3567 aa8.28□□□□□ -1.08
SIN3A-203ENST00000394949 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
SIN3A-203ENST00000394949 FBN3Q75N90 2809 aa8.21□□□□□ -1.09
SIN3A-203ENST00000394949 CSMD1Q96PZ7 3565 aa8.19□□□□□ -1.1
SIN3A-203ENST00000394949 RELNP78509 3460 aa8.19□□□□□ -1.1
SIN3A-203ENST00000394949 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
SIN3A-203ENST00000394949 SMG1Q96Q15 3661 aaKnown RBP8.18□□□□□ -1.1
SIN3A-203ENST00000394949 ASPMQ8IZT6 3477 aa8.11□□□□□ -1.11
SIN3A-203ENST00000394949 DMDP11532 3685 aa8.09□□□□□ -1.11
SIN3A-203ENST00000394949 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
SIN3A-203ENST00000394949 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
SIN3A-203ENST00000394949 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
SIN3A-203ENST00000394949 LAMA5O15230 3695 aa7.99□□□□□ -1.13
SIN3A-203ENST00000394949 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
SIN3A-203ENST00000394949 INE1O15225 51 aa7.93□□□□□ -1.14
SIN3A-203ENST00000394949 ZFHX3Q15911 3703 aa7.91□□□□□ -1.14
SIN3A-203ENST00000394949 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
SIN3A-203ENST00000394949 SVEP1Q4LDE5 3571 aa7.86□□□□□ -1.15
SIN3A-203ENST00000394949 MUC3AQ02505 3323 aa7.86□□□□□ -1.15
SIN3A-203ENST00000394949 NBPF19A0A087WUL8 3843 aa7.82□□□□□ -1.16
SIN3A-203ENST00000394949 SPENQ96T58 3664 aaKnown RBP7.79□□□□□ -1.16
SIN3A-203ENST00000394949 ANK3Q12955 4377 aaKnown RBP7.74□□□□□ -1.17
SIN3A-203ENST00000394949 BSNQ9UPA5 3926 aa7.73□□□□□ -1.17
SIN3A-203ENST00000394949 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
SIN3A-203ENST00000394949 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
SIN3A-203ENST00000394949 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
SIN3A-203ENST00000394949 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SIN3A-203ENST00000394949 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SIN3A-203ENST00000394949 CSMD2Q7Z408 3487 aa7.46□□□□□ -1.22
SIN3A-203ENST00000394949 CUBNO60494 3623 aa7.45□□□□□ -1.22
SIN3A-203ENST00000394949 KRTAP12-3P60328 96 aa7.4□□□□□ -1.22
SIN3A-203ENST00000394949 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
SIN3A-203ENST00000394949 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
SIN3A-203ENST00000394949 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
SIN3A-203ENST00000394949 VPS13CQ709C8 3753 aa7.29□□□□□ -1.24
SIN3A-203ENST00000394949 AKAP9Q99996 3911 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms