RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.09
CCDC142-202ENST00000393965 COA5Q86WW8 74 aa8.26□□□□□ -1.09
CCDC142-202ENST00000393965 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CCDC142-202ENST00000393965 LINC00472Q9H8W2 130 aa8.24□□□□□ -1.09
CCDC142-202ENST00000393965 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
CCDC142-202ENST00000393965 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
CCDC142-202ENST00000393965 MMP24-AS1A0A0U1RRL7 71 aa8.22□□□□□ -1.09
CCDC142-202ENST00000393965 Q5VV11 94 aa8.2□□□□□ -1.1
CCDC142-202ENST00000393965 CD164Q04900 197 aa8.2□□□□□ -1.1
CCDC142-202ENST00000393965 Q1T7F1 81 aa8.19□□□□□ -1.1
CCDC142-202ENST00000393965 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
CCDC142-202ENST00000393965 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
CCDC142-202ENST00000393965 LCE6AA0A183 80 aa8.19□□□□□ -1.1
CCDC142-202ENST00000393965 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
CCDC142-202ENST00000393965 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
CCDC142-202ENST00000393965 Q96NJ1 140 aa8.18□□□□□ -1.1
CCDC142-202ENST00000393965 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
CCDC142-202ENST00000393965 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
CCDC142-202ENST00000393965 VPS13BQ7Z7G8 4022 aa8.17□□□□□ -1.1
CCDC142-202ENST00000393965 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
CCDC142-202ENST00000393965 LINC00483Q53H64 154 aa8.15□□□□□ -1.11
CCDC142-202ENST00000393965 ZNF861PO60384 105 aa8.14□□□□□ -1.11
CCDC142-202ENST00000393965 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
CCDC142-202ENST00000393965 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
CCDC142-202ENST00000393965 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
CCDC142-202ENST00000393965 IGLV7-43P04211 117 aa8.09□□□□□ -1.12
CCDC142-202ENST00000393965 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.12
CCDC142-202ENST00000393965 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
CCDC142-202ENST00000393965 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
CCDC142-202ENST00000393965 Q5W150 140 aa8.08□□□□□ -1.12
CCDC142-202ENST00000393965 LCA10Q71F78 164 aa8.08□□□□□ -1.12
CCDC142-202ENST00000393965 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
CCDC142-202ENST00000393965 SPINK1P00995 79 aa8.07□□□□□ -1.12
CCDC142-202ENST00000393965 SPINK7P58062 85 aa8.07□□□□□ -1.12
CCDC142-202ENST00000393965 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
CCDC142-202ENST00000393965 HRES1P13985 223 aa8.06□□□□□ -1.12
CCDC142-202ENST00000393965 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
CCDC142-202ENST00000393965 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
CCDC142-202ENST00000393965 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
CCDC142-202ENST00000393965 IGLV7-46A0A075B6I9 117 aa8.03□□□□□ -1.12
CCDC142-202ENST00000393965 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
CCDC142-202ENST00000393965 ZNF706Q9Y5V0 76 aaPredicted RBP8.03□□□□□ -1.12
CCDC142-202ENST00000393965 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
CCDC142-202ENST00000393965 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
CCDC142-202ENST00000393965 H3BPC8 53 aa8□□□□□ -1.13
CCDC142-202ENST00000393965 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
CCDC142-202ENST00000393965 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
CCDC142-202ENST00000393965 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.13
CCDC142-202ENST00000393965 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
CCDC142-202ENST00000393965 Q6ZSA8 131 aa7.94□□□□□ -1.14
CCDC142-202ENST00000393965 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
CCDC142-202ENST00000393965 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
CCDC142-202ENST00000393965 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
CCDC142-202ENST00000393965 FAT1Q14517 4588 aa7.93□□□□□ -1.14
CCDC142-202ENST00000393965 LINC00313P59037 77 aa7.92□□□□□ -1.14
CCDC142-202ENST00000393965 KMT2CQ8NEZ4 4911 aaKnown RBP7.9□□□□□ -1.14
CCDC142-202ENST00000393965 Q75L30 129 aa7.9□□□□□ -1.14
CCDC142-202ENST00000393965 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
CCDC142-202ENST00000393965 Q8N1X5 172 aa7.88□□□□□ -1.15
CCDC142-202ENST00000393965 A0A1B0GU69 56 aa7.86□□□□□ -1.15
CCDC142-202ENST00000393965 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
CCDC142-202ENST00000393965 ACYP2P14621 99 aa7.85□□□□□ -1.15
CCDC142-202ENST00000393965 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
CCDC142-202ENST00000393965 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
CCDC142-202ENST00000393965 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
CCDC142-202ENST00000393965 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.16
CCDC142-202ENST00000393965 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.16
CCDC142-202ENST00000393965 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
CCDC142-202ENST00000393965 RYR2Q92736 4967 aa7.82□□□□□ -1.16
CCDC142-202ENST00000393965 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
CCDC142-202ENST00000393965 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
CCDC142-202ENST00000393965 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
CCDC142-202ENST00000393965 A6NN06 94 aa7.77□□□□□ -1.17
CCDC142-202ENST00000393965 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
CCDC142-202ENST00000393965 TYMSOSQ8TAI1 123 aa7.73□□□□□ -1.17
CCDC142-202ENST00000393965 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
CCDC142-202ENST00000393965 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.17
CCDC142-202ENST00000393965 PKHD1L1Q86WI1 4243 aa7.71□□□□□ -1.18
CCDC142-202ENST00000393965 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
CCDC142-202ENST00000393965 A0A1B0GVY2 172 aa7.68□□□□□ -1.18
CCDC142-202ENST00000393965 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
CCDC142-202ENST00000393965 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
CCDC142-202ENST00000393965 H3BS24 57 aa7.66□□□□□ -1.18
CCDC142-202ENST00000393965 RYR3Q15413 4870 aa7.66□□□□□ -1.18
CCDC142-202ENST00000393965 DMAC1Q96GE9 116 aa7.65□□□□□ -1.19
CCDC142-202ENST00000393965 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
CCDC142-202ENST00000393965 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
CCDC142-202ENST00000393965 UQCR11O14957 56 aa7.62□□□□□ -1.19
CCDC142-202ENST00000393965 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
CCDC142-202ENST00000393965 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
CCDC142-202ENST00000393965 HSPG2P98160 4391 aa7.56□□□□□ -1.2
CCDC142-202ENST00000393965 TNXBP22105 4242 aa7.54□□□□□ -1.2
CCDC142-202ENST00000393965 KRTAP17-1Q9BYP8 105 aa7.5□□□□□ -1.21
CCDC142-202ENST00000393965 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
CCDC142-202ENST00000393965 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
CCDC142-202ENST00000393965 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
CCDC142-202ENST00000393965 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.21
CCDC142-202ENST00000393965 Q5VSD8 79 aa7.43□□□□□ -1.22
CCDC142-202ENST00000393965 RYR1P21817 5038 aa7.42□□□□□ -1.22
CCDC142-202ENST00000393965 A0A0D9SG42 100 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms