RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 HUWE1Q7Z6Z7 4374 aaKnown RBP9.76□□□□□ -0.85
PHTF1-205ENST00000393357 SPINK1P00995 79 aa9.76□□□□□ -0.85
PHTF1-205ENST00000393357 SPRR1BP22528 89 aa9.76□□□□□ -0.85
PHTF1-205ENST00000393357 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
PHTF1-205ENST00000393357 C14orf177Q52M58 125 aa9.71□□□□□ -0.85
PHTF1-205ENST00000393357 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.85
PHTF1-205ENST00000393357 A0A1B0GU69 56 aa9.71□□□□□ -0.86
PHTF1-205ENST00000393357 Q6ZR54 194 aa9.71□□□□□ -0.86
PHTF1-205ENST00000393357 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
PHTF1-205ENST00000393357 IGKV2-30P06310 120 aa9.69□□□□□ -0.86
PHTF1-205ENST00000393357 CMYA5Q8N3K9 4069 aa9.69□□□□□ -0.86
PHTF1-205ENST00000393357 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
PHTF1-205ENST00000393357 RTL8CO15255 209 aa9.67□□□□□ -0.86
PHTF1-205ENST00000393357 ACYP2P14621 99 aa9.66□□□□□ -0.86
PHTF1-205ENST00000393357 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.86
PHTF1-205ENST00000393357 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
PHTF1-205ENST00000393357 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
PHTF1-205ENST00000393357 C8orf87E5RJ46 101 aa9.63□□□□□ -0.87
PHTF1-205ENST00000393357 KRTAP13-1Q8IUC0 172 aa9.63□□□□□ -0.87
PHTF1-205ENST00000393357 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
PHTF1-205ENST00000393357 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
PHTF1-205ENST00000393357 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
PHTF1-205ENST00000393357 PLECQ15149 4684 aaKnown RBP9.58□□□□□ -0.88
PHTF1-205ENST00000393357 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
PHTF1-205ENST00000393357 ZNF861PO60384 105 aa9.55□□□□□ -0.88
PHTF1-205ENST00000393357 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
PHTF1-205ENST00000393357 DNAH3Q8TD57 4116 aa9.55□□□□□ -0.88
PHTF1-205ENST00000393357 ZNF706Q9Y5V0 76 aaPredicted RBP9.55□□□□□ -0.88
PHTF1-205ENST00000393357 IGLV5-52A0A0A0MRZ9 124 aa9.54□□□□□ -0.88
PHTF1-205ENST00000393357 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
PHTF1-205ENST00000393357 Q8N1X5 172 aa9.52□□□□□ -0.89
PHTF1-205ENST00000393357 A0A087WTM6 91 aa9.51□□□□□ -0.89
PHTF1-205ENST00000393357 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
PHTF1-205ENST00000393357 LINC01554Q52M75 96 aa9.49□□□□□ -0.89
PHTF1-205ENST00000393357 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
PHTF1-205ENST00000393357 UQCR11O14957 56 aa9.46□□□□□ -0.89
PHTF1-205ENST00000393357 LINC00483Q53H64 154 aa9.46□□□□□ -0.89
PHTF1-205ENST00000393357 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.89
PHTF1-205ENST00000393357 CRIPTQ9P021 101 aa9.46□□□□□ -0.9
PHTF1-205ENST00000393357 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
PHTF1-205ENST00000393357 H3BS24 57 aa9.44□□□□□ -0.9
PHTF1-205ENST00000393357 DMAC1Q96GE9 116 aa9.43□□□□□ -0.9
PHTF1-205ENST00000393357 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
PHTF1-205ENST00000393357 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
PHTF1-205ENST00000393357 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
PHTF1-205ENST00000393357 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
PHTF1-205ENST00000393357 LY6G6CO95867 125 aa9.36□□□□□ -0.91
PHTF1-205ENST00000393357 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
PHTF1-205ENST00000393357 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
PHTF1-205ENST00000393357 SPATA8Q6RVD6 105 aa9.35□□□□□ -0.91
PHTF1-205ENST00000393357 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
PHTF1-205ENST00000393357 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
PHTF1-205ENST00000393357 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
PHTF1-205ENST00000393357 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
PHTF1-205ENST00000393357 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
PHTF1-205ENST00000393357 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
PHTF1-205ENST00000393357 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
PHTF1-205ENST00000393357 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
PHTF1-205ENST00000393357 DNAH2Q9P225 4427 aa9.22□□□□□ -0.93
PHTF1-205ENST00000393357 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
PHTF1-205ENST00000393357 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
PHTF1-205ENST00000393357 TYMSOSQ8TAI1 123 aa9.19□□□□□ -0.94
PHTF1-205ENST00000393357 VPS13DQ5THJ4 4388 aa9.18□□□□□ -0.94
PHTF1-205ENST00000393357 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
PHTF1-205ENST00000393357 PRKDCP78527 4128 aaKnown RBP9.14□□□□□ -0.95
PHTF1-205ENST00000393357 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
PHTF1-205ENST00000393357 Q6ZSA8 131 aa9.1□□□□□ -0.95
PHTF1-205ENST00000393357 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
PHTF1-205ENST00000393357 H0YAA0 97 aa9.09□□□□□ -0.95
PHTF1-205ENST00000393357 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
PHTF1-205ENST00000393357 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
PHTF1-205ENST00000393357 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
PHTF1-205ENST00000393357 A0A1B0GU33 70 aa9.03□□□□□ -0.96
PHTF1-205ENST00000393357 A0A0D9SG42 100 aa9.01□□□□□ -0.97
PHTF1-205ENST00000393357 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
PHTF1-205ENST00000393357 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
PHTF1-205ENST00000393357 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
PHTF1-205ENST00000393357 A8MUU9 505 aa8.94□□□□□ -0.98
PHTF1-205ENST00000393357 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
PHTF1-205ENST00000393357 FAT2Q9NYQ8 4349 aa8.92□□□□□ -0.98
PHTF1-205ENST00000393357 ROMO1P60602 79 aa8.89□□□□□ -0.99
PHTF1-205ENST00000393357 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
PHTF1-205ENST00000393357 K7ERS5 55 aa8.85□□□□□ -0.99
PHTF1-205ENST00000393357 KRTAP3-1Q9BYR8 98 aa8.85□□□□□ -0.99
PHTF1-205ENST00000393357 SPINT4Q6UDR6 99 aa8.82□□□□□ -1
PHTF1-205ENST00000393357 HYDINQ4G0P3 5121 aa8.82□□□□□ -1
PHTF1-205ENST00000393357 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
PHTF1-205ENST00000393357 DNHD1Q96M86 4753 aa8.8□□□□□ -1
PHTF1-205ENST00000393357 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
PHTF1-205ENST00000393357 FAT1Q14517 4588 aa8.79□□□□□ -1
PHTF1-205ENST00000393357 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
PHTF1-205ENST00000393357 P0C880 135 aa8.71□□□□□ -1.01
PHTF1-205ENST00000393357 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
PHTF1-205ENST00000393357 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
PHTF1-205ENST00000393357 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
PHTF1-205ENST00000393357 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
PHTF1-205ENST00000393357 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
PHTF1-205ENST00000393357 PKD1P98161 4303 aa8.56□□□□□ -1.04
PHTF1-205ENST00000393357 C20orf166-AS1Q96NR2 134 aa8.53□□□□□ -1.04
PHTF1-205ENST00000393357 DYNC1H1Q14204 4646 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms