RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
PTGFRN-201ENST00000393203 KRTAP13-2Q52LG2 175 aa8.59□□□□□ -1.03
PTGFRN-201ENST00000393203 APCP25054 2843 aa8.58□□□□□ -1.04
PTGFRN-201ENST00000393203 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
PTGFRN-201ENST00000393203 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
PTGFRN-201ENST00000393203 UTP20O75691 2785 aaKnown RBP8.54□□□□□ -1.04
PTGFRN-201ENST00000393203 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
PTGFRN-201ENST00000393203 HIVEP1P15822 2718 aa8.54□□□□□ -1.04
PTGFRN-201ENST00000393203 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
PTGFRN-201ENST00000393203 ITPR2Q14571 2701 aa8.51□□□□□ -1.05
PTGFRN-201ENST00000393203 ZZEF1O43149 2961 aa8.51□□□□□ -1.05
PTGFRN-201ENST00000393203 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
PTGFRN-201ENST00000393203 A8MUU9 505 aa8.49□□□□□ -1.05
PTGFRN-201ENST00000393203 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
PTGFRN-201ENST00000393203 MYO15AQ9UKN7 3530 aa8.47□□□□□ -1.05
PTGFRN-201ENST00000393203 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
PTGFRN-201ENST00000393203 EYSQ5T1H1 3165 aa8.41□□□□□ -1.06
PTGFRN-201ENST00000393203 FLNCQ14315 2725 aa8.41□□□□□ -1.06
PTGFRN-201ENST00000393203 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
PTGFRN-201ENST00000393203 CELSR2Q9HCU4 2923 aa8.38□□□□□ -1.07
PTGFRN-201ENST00000393203 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
PTGFRN-201ENST00000393203 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
PTGFRN-201ENST00000393203 LOC400499M0QZD8 3231 aa8.29□□□□□ -1.08
PTGFRN-201ENST00000393203 WDFY3Q8IZQ1 3526 aa8.25□□□□□ -1.09
PTGFRN-201ENST00000393203 DCHS2Q6V1P9 2916 aa8.24□□□□□ -1.09
PTGFRN-201ENST00000393203 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
PTGFRN-201ENST00000393203 DMXL1Q9Y485 3027 aa8.22□□□□□ -1.09
PTGFRN-201ENST00000393203 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
PTGFRN-201ENST00000393203 H0YAA0 97 aa8.19□□□□□ -1.1
PTGFRN-201ENST00000393203 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
PTGFRN-201ENST00000393203 FBN2P35556 2912 aa8.14□□□□□ -1.11
PTGFRN-201ENST00000393203 NIPBLQ6KC79 2804 aaeCLIP8.13□□□□□ -1.11
PTGFRN-201ENST00000393203 TNP1P09430 55 aa8.13□□□□□ -1.11
PTGFRN-201ENST00000393203 HRNRQ86YZ3 2850 aaPredicted RBP8.13□□□□□ -1.11
PTGFRN-201ENST00000393203 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
PTGFRN-201ENST00000393203 DCHS1Q96JQ0 3298 aa8.09□□□□□ -1.11
PTGFRN-201ENST00000393203 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
PTGFRN-201ENST00000393203 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
PTGFRN-201ENST00000393203 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
PTGFRN-201ENST00000393203 XP32Q5T750 250 aa8.03□□□□□ -1.12
PTGFRN-201ENST00000393203 ASPMQ8IZT6 3477 aa8.03□□□□□ -1.12
PTGFRN-201ENST00000393203 RELNP78509 3460 aa8.02□□□□□ -1.13
PTGFRN-201ENST00000393203 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
PTGFRN-201ENST00000393203 CSMD1Q96PZ7 3565 aa7.98□□□□□ -1.13
PTGFRN-201ENST00000393203 NF1P21359 2839 aa7.97□□□□□ -1.13
PTGFRN-201ENST00000393203 P0C880 135 aa7.94□□□□□ -1.14
PTGFRN-201ENST00000393203 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
PTGFRN-201ENST00000393203 TGP01266 2768 aa7.86□□□□□ -1.15
PTGFRN-201ENST00000393203 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
PTGFRN-201ENST00000393203 LAMA5O15230 3695 aa7.83□□□□□ -1.16
PTGFRN-201ENST00000393203 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
PTGFRN-201ENST00000393203 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
PTGFRN-201ENST00000393203 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
PTGFRN-201ENST00000393203 TENM3Q9P273 2699 aa7.74□□□□□ -1.17
PTGFRN-201ENST00000393203 MXRA5Q9NR99 2828 aa7.73□□□□□ -1.17
PTGFRN-201ENST00000393203 TENM2Q9NT68 2774 aa7.71□□□□□ -1.18
PTGFRN-201ENST00000393203 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
PTGFRN-201ENST00000393203 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
PTGFRN-201ENST00000393203 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
PTGFRN-201ENST00000393203 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.18
PTGFRN-201ENST00000393203 DMDP11532 3685 aa7.63□□□□□ -1.19
PTGFRN-201ENST00000393203 CUBNO60494 3623 aa7.62□□□□□ -1.19
PTGFRN-201ENST00000393203 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
PTGFRN-201ENST00000393203 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
PTGFRN-201ENST00000393203 PDZD2O15018 2839 aa7.6□□□□□ -1.19
PTGFRN-201ENST00000393203 VWFP04275 2813 aa7.58□□□□□ -1.2
PTGFRN-201ENST00000393203 KRTAP21-3Q3LHN1 58 aa7.5□□□□□ -1.21
PTGFRN-201ENST00000393203 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
PTGFRN-201ENST00000393203 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
PTGFRN-201ENST00000393203 SPENQ96T58 3664 aaKnown RBP7.4□□□□□ -1.23
PTGFRN-201ENST00000393203 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
PTGFRN-201ENST00000393203 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
PTGFRN-201ENST00000393203 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
PTGFRN-201ENST00000393203 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
PTGFRN-201ENST00000393203 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
PTGFRN-201ENST00000393203 ZFHX3Q15911 3703 aa7.32□□□□□ -1.24
PTGFRN-201ENST00000393203 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
PTGFRN-201ENST00000393203 FBN3Q75N90 2809 aa7.23□□□□□ -1.25
PTGFRN-201ENST00000393203 ANK3Q12955 4377 aaKnown RBP7.21□□□□□ -1.26
PTGFRN-201ENST00000393203 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
PTGFRN-201ENST00000393203 MEGF8Q7Z7M0 2845 aa7.16□□□□□ -1.26
PTGFRN-201ENST00000393203 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.27
PTGFRN-201ENST00000393203 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
PTGFRN-201ENST00000393203 OTOGQ6ZRI0 2925 aa7.09□□□□□ -1.27
PTGFRN-201ENST00000393203 COL7A1Q02388 2944 aa7.02□□□□□ -1.28
PTGFRN-201ENST00000393203 VPS13CQ709C8 3753 aa7□□□□□ -1.29
PTGFRN-201ENST00000393203 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
PTGFRN-201ENST00000393203 BSNQ9UPA5 3926 aa6.99□□□□□ -1.29
PTGFRN-201ENST00000393203 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
PTGFRN-201ENST00000393203 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
PTGFRN-201ENST00000393203 HUWE1Q7Z6Z7 4374 aaKnown RBP6.88□□□□□ -1.31
PTGFRN-201ENST00000393203 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
PTGFRN-201ENST00000393203 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
PTGFRN-201ENST00000393203 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
PTGFRN-201ENST00000393203 INE1O15225 51 aa6.68□□□□□ -1.34
PTGFRN-201ENST00000393203 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
PTGFRN-201ENST00000393203 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
PTGFRN-201ENST00000393203 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
PTGFRN-201ENST00000393203 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
PTGFRN-201ENST00000393203 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms