RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
KLHL42-201ENST00000381271 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
KLHL42-201ENST00000381271 NSD1Q96L73 2696 aaPredicted RBP8.83□□□□□ -1
KLHL42-201ENST00000381271 A6NN06 94 aa8.83□□□□□ -1
KLHL42-201ENST00000381271 KALRNO60229 2985 aa8.82□□□□□ -1
KLHL42-201ENST00000381271 ITPR1Q14643 2758 aa8.81□□□□□ -1
KLHL42-201ENST00000381271 KRTAP10-8P60410 259 aa8.81□□□□□ -1
KLHL42-201ENST00000381271 TNP1P09430 55 aa8.8□□□□□ -1
KLHL42-201ENST00000381271 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
KLHL42-201ENST00000381271 FLNCQ14315 2725 aa8.72□□□□□ -1.01
KLHL42-201ENST00000381271 SPEGQ15772 3267 aa8.71□□□□□ -1.01
KLHL42-201ENST00000381271 LRBAP50851 2863 aa8.71□□□□□ -1.01
KLHL42-201ENST00000381271 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
KLHL42-201ENST00000381271 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
KLHL42-201ENST00000381271 EYSQ5T1H1 3165 aa8.68□□□□□ -1.02
KLHL42-201ENST00000381271 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
KLHL42-201ENST00000381271 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
KLHL42-201ENST00000381271 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
KLHL42-201ENST00000381271 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
KLHL42-201ENST00000381271 SPTBN5Q9NRC6 3674 aaKnown RBP8.61□□□□□ -1.03
KLHL42-201ENST00000381271 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
KLHL42-201ENST00000381271 KMT2BQ9UMN6 2715 aaPredicted RBP8.59□□□□□ -1.03
KLHL42-201ENST00000381271 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
KLHL42-201ENST00000381271 ZZEF1O43149 2961 aa8.56□□□□□ -1.04
KLHL42-201ENST00000381271 USP34Q70CQ2 3546 aa8.55□□□□□ -1.04
KLHL42-201ENST00000381271 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
KLHL42-201ENST00000381271 P0C880 135 aa8.53□□□□□ -1.04
KLHL42-201ENST00000381271 APCP25054 2843 aa8.51□□□□□ -1.05
KLHL42-201ENST00000381271 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
KLHL42-201ENST00000381271 DMXL1Q9Y485 3027 aa8.46□□□□□ -1.06
KLHL42-201ENST00000381271 XP32Q5T750 250 aa8.45□□□□□ -1.06
KLHL42-201ENST00000381271 TNRC18O15417 2968 aaPredicted RBP8.45□□□□□ -1.06
KLHL42-201ENST00000381271 DCHS2Q6V1P9 2916 aa8.38□□□□□ -1.07
KLHL42-201ENST00000381271 MYO15AQ9UKN7 3530 aa8.36□□□□□ -1.07
KLHL42-201ENST00000381271 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
KLHL42-201ENST00000381271 H0YAA0 97 aa8.33□□□□□ -1.08
KLHL42-201ENST00000381271 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
KLHL42-201ENST00000381271 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
KLHL42-201ENST00000381271 ZANQ9Y493 2812 aa8.29□□□□□ -1.08
KLHL42-201ENST00000381271 NIPBLQ6KC79 2804 aaeCLIP8.23□□□□□ -1.09
KLHL42-201ENST00000381271 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
KLHL42-201ENST00000381271 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
KLHL42-201ENST00000381271 NF1P21359 2839 aa8.17□□□□□ -1.1
KLHL42-201ENST00000381271 FBN2P35556 2912 aa8.15□□□□□ -1.11
KLHL42-201ENST00000381271 TENM1Q9UKZ4 2725 aa8.14□□□□□ -1.11
KLHL42-201ENST00000381271 RELNP78509 3460 aa8.11□□□□□ -1.11
KLHL42-201ENST00000381271 WDFY3Q8IZQ1 3526 aa8.1□□□□□ -1.11
KLHL42-201ENST00000381271 DCHS1Q96JQ0 3298 aa8.08□□□□□ -1.12
KLHL42-201ENST00000381271 TENM2Q9NT68 2774 aa8.08□□□□□ -1.12
KLHL42-201ENST00000381271 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
KLHL42-201ENST00000381271 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
KLHL42-201ENST00000381271 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
KLHL42-201ENST00000381271 ASPMQ8IZT6 3477 aa8.04□□□□□ -1.12
KLHL42-201ENST00000381271 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
KLHL42-201ENST00000381271 CELSR1Q9NYQ6 3014 aa7.98□□□□□ -1.13
KLHL42-201ENST00000381271 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
KLHL42-201ENST00000381271 LAMA5O15230 3695 aa7.95□□□□□ -1.14
KLHL42-201ENST00000381271 NBPF19A0A087WUL8 3843 aa7.93□□□□□ -1.14
KLHL42-201ENST00000381271 VWFP04275 2813 aa7.92□□□□□ -1.14
KLHL42-201ENST00000381271 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
KLHL42-201ENST00000381271 ZFHX4Q86UP3 3567 aa7.86□□□□□ -1.15
KLHL42-201ENST00000381271 MXRA5Q9NR99 2828 aa7.82□□□□□ -1.16
KLHL42-201ENST00000381271 ZFHX3Q15911 3703 aa7.8□□□□□ -1.16
KLHL42-201ENST00000381271 TGP01266 2768 aa7.79□□□□□ -1.16
KLHL42-201ENST00000381271 DMDP11532 3685 aa7.71□□□□□ -1.18
KLHL42-201ENST00000381271 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
KLHL42-201ENST00000381271 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
KLHL42-201ENST00000381271 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.19
KLHL42-201ENST00000381271 CSMD1Q96PZ7 3565 aa7.64□□□□□ -1.19
KLHL42-201ENST00000381271 FBN1P35555 2871 aaKnown RBP7.63□□□□□ -1.19
KLHL42-201ENST00000381271 MUC3AQ02505 3323 aa7.61□□□□□ -1.19
KLHL42-201ENST00000381271 PDZD2O15018 2839 aa7.61□□□□□ -1.19
KLHL42-201ENST00000381271 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
KLHL42-201ENST00000381271 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
KLHL42-201ENST00000381271 CUBNO60494 3623 aa7.5□□□□□ -1.21
KLHL42-201ENST00000381271 SMG1Q96Q15 3661 aaKnown RBP7.49□□□□□ -1.21
KLHL42-201ENST00000381271 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
KLHL42-201ENST00000381271 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
KLHL42-201ENST00000381271 OTOGQ6ZRI0 2925 aa7.41□□□□□ -1.22
KLHL42-201ENST00000381271 SPENQ96T58 3664 aaKnown RBP7.31□□□□□ -1.24
KLHL42-201ENST00000381271 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
KLHL42-201ENST00000381271 TRRAPQ9Y4A5 3859 aa7.22□□□□□ -1.25
KLHL42-201ENST00000381271 FBN3Q75N90 2809 aa7.2□□□□□ -1.26
KLHL42-201ENST00000381271 ANK3Q12955 4377 aaKnown RBP7.2□□□□□ -1.26
KLHL42-201ENST00000381271 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
KLHL42-201ENST00000381271 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
KLHL42-201ENST00000381271 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.27
KLHL42-201ENST00000381271 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
KLHL42-201ENST00000381271 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
KLHL42-201ENST00000381271 INE1O15225 51 aa7.01□□□□□ -1.29
KLHL42-201ENST00000381271 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
KLHL42-201ENST00000381271 KRTAP10-5P60370 271 aa6.96□□□□□ -1.29
KLHL42-201ENST00000381271 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.29
KLHL42-201ENST00000381271 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
KLHL42-201ENST00000381271 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
KLHL42-201ENST00000381271 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
KLHL42-201ENST00000381271 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
KLHL42-201ENST00000381271 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
KLHL42-201ENST00000381271 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.32
KLHL42-201ENST00000381271 HUWE1Q7Z6Z7 4374 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms