RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 A8MUU9 505 aa8.96□□□□□ -0.97
COL2A1-202ENST00000380518 TENM4Q6N022 2769 aa8.96□□□□□ -0.97
COL2A1-202ENST00000380518 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
COL2A1-202ENST00000380518 LAMA1P25391 3075 aa8.95□□□□□ -0.98
COL2A1-202ENST00000380518 VCANP13611 3396 aa8.94□□□□□ -0.98
COL2A1-202ENST00000380518 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
COL2A1-202ENST00000380518 DNAH14Q0VDD8 3507 aa8.93□□□□□ -0.98
COL2A1-202ENST00000380518 FRYLO94915 3013 aa8.89□□□□□ -0.99
COL2A1-202ENST00000380518 ADGRG4Q8IZF6 3080 aa8.87□□□□□ -0.99
COL2A1-202ENST00000380518 CELSR2Q9HCU4 2923 aa8.86□□□□□ -0.99
COL2A1-202ENST00000380518 LRBAP50851 2863 aa8.83□□□□□ -1
COL2A1-202ENST00000380518 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
COL2A1-202ENST00000380518 ZZEF1O43149 2961 aa8.77□□□□□ -1.01
COL2A1-202ENST00000380518 BOD1L1Q8NFC6 3051 aa8.77□□□□□ -1.01
COL2A1-202ENST00000380518 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
COL2A1-202ENST00000380518 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
COL2A1-202ENST00000380518 KRTAP21-3Q3LHN1 58 aa8.71□□□□□ -1.02
COL2A1-202ENST00000380518 COL6A3P12111 3177 aa8.7□□□□□ -1.02
COL2A1-202ENST00000380518 CRYBG3Q68DQ2 2970 aa8.7□□□□□ -1.02
COL2A1-202ENST00000380518 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 TNP1P09430 55 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.02
COL2A1-202ENST00000380518 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
COL2A1-202ENST00000380518 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
COL2A1-202ENST00000380518 SPEGQ15772 3267 aa8.62□□□□□ -1.03
COL2A1-202ENST00000380518 EYSQ5T1H1 3165 aa8.61□□□□□ -1.03
COL2A1-202ENST00000380518 XP32Q5T750 250 aa8.55□□□□□ -1.04
COL2A1-202ENST00000380518 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
COL2A1-202ENST00000380518 CFAP47Q6ZTR5 3102 aa8.52□□□□□ -1.05
COL2A1-202ENST00000380518 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
COL2A1-202ENST00000380518 NF1P21359 2839 aa8.49□□□□□ -1.05
COL2A1-202ENST00000380518 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
COL2A1-202ENST00000380518 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
COL2A1-202ENST00000380518 H0YAA0 97 aa8.43□□□□□ -1.06
COL2A1-202ENST00000380518 FBN2P35556 2912 aa8.42□□□□□ -1.06
COL2A1-202ENST00000380518 DMXL1Q9Y485 3027 aa8.4□□□□□ -1.06
COL2A1-202ENST00000380518 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
COL2A1-202ENST00000380518 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
COL2A1-202ENST00000380518 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 MYO15AQ9UKN7 3530 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 LOC400499M0QZD8 3231 aa8.33□□□□□ -1.08
COL2A1-202ENST00000380518 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
COL2A1-202ENST00000380518 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
COL2A1-202ENST00000380518 P0C880 135 aa8.29□□□□□ -1.08
COL2A1-202ENST00000380518 TGP01266 2768 aa8.28□□□□□ -1.08
COL2A1-202ENST00000380518 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
COL2A1-202ENST00000380518 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
COL2A1-202ENST00000380518 CELSR1Q9NYQ6 3014 aa8.19□□□□□ -1.1
COL2A1-202ENST00000380518 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
COL2A1-202ENST00000380518 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
COL2A1-202ENST00000380518 PDZD2O15018 2839 aa8.1□□□□□ -1.11
COL2A1-202ENST00000380518 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
COL2A1-202ENST00000380518 VWFP04275 2813 aa8.04□□□□□ -1.12
COL2A1-202ENST00000380518 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
COL2A1-202ENST00000380518 RELNP78509 3460 aa7.97□□□□□ -1.13
COL2A1-202ENST00000380518 LAMA5O15230 3695 aa7.89□□□□□ -1.15
COL2A1-202ENST00000380518 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
COL2A1-202ENST00000380518 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
COL2A1-202ENST00000380518 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
COL2A1-202ENST00000380518 DCHS1Q96JQ0 3298 aa7.87□□□□□ -1.15
COL2A1-202ENST00000380518 DMDP11532 3685 aa7.86□□□□□ -1.15
COL2A1-202ENST00000380518 ZFHX4Q86UP3 3567 aa7.85□□□□□ -1.15
COL2A1-202ENST00000380518 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
COL2A1-202ENST00000380518 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
COL2A1-202ENST00000380518 FBN3Q75N90 2809 aa7.62□□□□□ -1.19
COL2A1-202ENST00000380518 SMG1Q96Q15 3661 aaKnown RBP7.6□□□□□ -1.19
COL2A1-202ENST00000380518 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
COL2A1-202ENST00000380518 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
COL2A1-202ENST00000380518 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
COL2A1-202ENST00000380518 MEGF8Q7Z7M0 2845 aa7.52□□□□□ -1.2
COL2A1-202ENST00000380518 COL7A1Q02388 2944 aa7.46□□□□□ -1.22
COL2A1-202ENST00000380518 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
COL2A1-202ENST00000380518 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
COL2A1-202ENST00000380518 SVEP1Q4LDE5 3571 aa7.42□□□□□ -1.22
COL2A1-202ENST00000380518 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
COL2A1-202ENST00000380518 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
COL2A1-202ENST00000380518 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
COL2A1-202ENST00000380518 CUBNO60494 3623 aa7.31□□□□□ -1.24
COL2A1-202ENST00000380518 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
COL2A1-202ENST00000380518 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
COL2A1-202ENST00000380518 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
COL2A1-202ENST00000380518 BSNQ9UPA5 3926 aa7.23□□□□□ -1.25
COL2A1-202ENST00000380518 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
COL2A1-202ENST00000380518 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
COL2A1-202ENST00000380518 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
COL2A1-202ENST00000380518 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
COL2A1-202ENST00000380518 INE1O15225 51 aa7.07□□□□□ -1.28
COL2A1-202ENST00000380518 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
COL2A1-202ENST00000380518 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
COL2A1-202ENST00000380518 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
COL2A1-202ENST00000380518 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
COL2A1-202ENST00000380518 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
COL2A1-202ENST00000380518 LCE3AQ5TA76 89 aa6.84□□□□□ -1.32
COL2A1-202ENST00000380518 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
COL2A1-202ENST00000380518 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms