RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 PCOTHQ58A44 107 aa7.2□□□□□ -1.26
RFC3-201ENST00000380071 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
RFC3-201ENST00000380071 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
RFC3-201ENST00000380071 IGLV7-43P04211 117 aa7.19□□□□□ -1.26
RFC3-201ENST00000380071 TP53AIP1Q9HCN2 124 aa7.19□□□□□ -1.26
RFC3-201ENST00000380071 LY6G6CO95867 125 aa7.18□□□□□ -1.26
RFC3-201ENST00000380071 Q5VV11 94 aa7.18□□□□□ -1.26
RFC3-201ENST00000380071 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
RFC3-201ENST00000380071 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
RFC3-201ENST00000380071 SPINK6Q6UWN8 80 aa7.17□□□□□ -1.26
RFC3-201ENST00000380071 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
RFC3-201ENST00000380071 A8MU10 97 aa7.16□□□□□ -1.26
RFC3-201ENST00000380071 CD164Q04900 197 aa7.16□□□□□ -1.26
RFC3-201ENST00000380071 V9GYY9 64 aa7.16□□□□□ -1.26
RFC3-201ENST00000380071 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
RFC3-201ENST00000380071 COA5Q86WW8 74 aa7.14□□□□□ -1.27
RFC3-201ENST00000380071 KRTAP10-2P60368 255 aa7.13□□□□□ -1.27
RFC3-201ENST00000380071 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
RFC3-201ENST00000380071 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
RFC3-201ENST00000380071 PRR15LQ9BU68 103 aa7.11□□□□□ -1.27
RFC3-201ENST00000380071 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
RFC3-201ENST00000380071 Q5W150 140 aa7.09□□□□□ -1.27
RFC3-201ENST00000380071 PKD1P98161 4303 aa7.09□□□□□ -1.27
RFC3-201ENST00000380071 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
RFC3-201ENST00000380071 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
RFC3-201ENST00000380071 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
RFC3-201ENST00000380071 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
RFC3-201ENST00000380071 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
RFC3-201ENST00000380071 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
RFC3-201ENST00000380071 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
RFC3-201ENST00000380071 VPS13BQ7Z7G8 4022 aa7.03□□□□□ -1.28
RFC3-201ENST00000380071 HRES1P13985 223 aa7.03□□□□□ -1.28
RFC3-201ENST00000380071 Q75L30 129 aa7.03□□□□□ -1.28
RFC3-201ENST00000380071 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.28
RFC3-201ENST00000380071 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
RFC3-201ENST00000380071 LCA10Q71F78 164 aa7.01□□□□□ -1.29
RFC3-201ENST00000380071 Q6ZSA8 131 aa7□□□□□ -1.29
RFC3-201ENST00000380071 A6NED7 52 aa6.99□□□□□ -1.29
RFC3-201ENST00000380071 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
RFC3-201ENST00000380071 LINC00313P59037 77 aa6.99□□□□□ -1.29
RFC3-201ENST00000380071 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
RFC3-201ENST00000380071 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
RFC3-201ENST00000380071 SEC61GP60059 68 aa6.97□□□□□ -1.29
RFC3-201ENST00000380071 KRTAP1-4P0C5Y4 121 aa6.96□□□□□ -1.3
RFC3-201ENST00000380071 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.3
RFC3-201ENST00000380071 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
RFC3-201ENST00000380071 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
RFC3-201ENST00000380071 SPINK7P58062 85 aa6.91□□□□□ -1.3
RFC3-201ENST00000380071 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
RFC3-201ENST00000380071 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
RFC3-201ENST00000380071 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.3
RFC3-201ENST00000380071 PKHD1P08F94 4074 aa6.9□□□□□ -1.31
RFC3-201ENST00000380071 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
RFC3-201ENST00000380071 ACYP2P14621 99 aa6.88□□□□□ -1.31
RFC3-201ENST00000380071 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
RFC3-201ENST00000380071 A6NN06 94 aa6.86□□□□□ -1.31
RFC3-201ENST00000380071 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
RFC3-201ENST00000380071 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
RFC3-201ENST00000380071 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
RFC3-201ENST00000380071 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
RFC3-201ENST00000380071 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
RFC3-201ENST00000380071 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
RFC3-201ENST00000380071 SPINK1P00995 79 aa6.8□□□□□ -1.32
RFC3-201ENST00000380071 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
RFC3-201ENST00000380071 FAT1Q14517 4588 aa6.77□□□□□ -1.33
RFC3-201ENST00000380071 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
RFC3-201ENST00000380071 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
RFC3-201ENST00000380071 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
RFC3-201ENST00000380071 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
RFC3-201ENST00000380071 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.34
RFC3-201ENST00000380071 A0A1B0GU69 56 aa6.7□□□□□ -1.34
RFC3-201ENST00000380071 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
RFC3-201ENST00000380071 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
RFC3-201ENST00000380071 Q8N1X5 172 aa6.67□□□□□ -1.34
RFC3-201ENST00000380071 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
RFC3-201ENST00000380071 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
RFC3-201ENST00000380071 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
RFC3-201ENST00000380071 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
RFC3-201ENST00000380071 KRTAP21-3Q3LHN1 58 aa6.61□□□□□ -1.35
RFC3-201ENST00000380071 RYR2Q92736 4967 aa6.59□□□□□ -1.35
RFC3-201ENST00000380071 UQCR11O14957 56 aa6.59□□□□□ -1.35
RFC3-201ENST00000380071 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
RFC3-201ENST00000380071 A8MUU9 505 aa6.58□□□□□ -1.36
RFC3-201ENST00000380071 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
RFC3-201ENST00000380071 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
RFC3-201ENST00000380071 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
RFC3-201ENST00000380071 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
RFC3-201ENST00000380071 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
RFC3-201ENST00000380071 KRTAP3-3Q9BYR6 98 aa6.52□□□□□ -1.37
RFC3-201ENST00000380071 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
RFC3-201ENST00000380071 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
RFC3-201ENST00000380071 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
RFC3-201ENST00000380071 TNXBP22105 4242 aa6.49□□□□□ -1.37
RFC3-201ENST00000380071 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
RFC3-201ENST00000380071 HSPG2P98160 4391 aa6.42□□□□□ -1.38
RFC3-201ENST00000380071 H0YAA0 97 aa6.41□□□□□ -1.38
RFC3-201ENST00000380071 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
RFC3-201ENST00000380071 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
RFC3-201ENST00000380071 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
RFC3-201ENST00000380071 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms