RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
KCNC1-202ENST00000379472 XP32Q5T750 250 aa8.51□□□□□ -1.05
KCNC1-202ENST00000379472 LAMA1P25391 3075 aa8.5□□□□□ -1.05
KCNC1-202ENST00000379472 VCANP13611 3396 aa8.5□□□□□ -1.05
KCNC1-202ENST00000379472 ZNF292O60281 2723 aa8.46□□□□□ -1.05
KCNC1-202ENST00000379472 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.05
KCNC1-202ENST00000379472 CHD9Q3L8U1 2897 aa8.46□□□□□ -1.06
KCNC1-202ENST00000379472 CRYBG3Q68DQ2 2970 aa8.45□□□□□ -1.06
KCNC1-202ENST00000379472 USP34Q70CQ2 3546 aa8.45□□□□□ -1.06
KCNC1-202ENST00000379472 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
KCNC1-202ENST00000379472 SPEGQ15772 3267 aa8.39□□□□□ -1.07
KCNC1-202ENST00000379472 FRYLO94915 3013 aa8.38□□□□□ -1.07
KCNC1-202ENST00000379472 KRTAP13-1Q8IUC0 172 aa8.38□□□□□ -1.07
KCNC1-202ENST00000379472 SPTBN5Q9NRC6 3674 aaKnown RBP8.38□□□□□ -1.07
KCNC1-202ENST00000379472 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
KCNC1-202ENST00000379472 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
KCNC1-202ENST00000379472 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
KCNC1-202ENST00000379472 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
KCNC1-202ENST00000379472 UTP20O75691 2785 aaKnown RBP8.35□□□□□ -1.07
KCNC1-202ENST00000379472 COL12A1Q99715 3063 aa8.32□□□□□ -1.08
KCNC1-202ENST00000379472 KRTAP21-3Q3LHN1 58 aa8.3□□□□□ -1.08
KCNC1-202ENST00000379472 DMXL2Q8TDJ6 3036 aa8.29□□□□□ -1.08
KCNC1-202ENST00000379472 MYO15AQ9UKN7 3530 aa8.29□□□□□ -1.08
KCNC1-202ENST00000379472 H0YAA0 97 aa8.26□□□□□ -1.09
KCNC1-202ENST00000379472 EYSQ5T1H1 3165 aa8.26□□□□□ -1.09
KCNC1-202ENST00000379472 BOD1L1Q8NFC6 3051 aa8.24□□□□□ -1.09
KCNC1-202ENST00000379472 TACC2O95359 2948 aa8.19□□□□□ -1.1
KCNC1-202ENST00000379472 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
KCNC1-202ENST00000379472 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
KCNC1-202ENST00000379472 ATMQ13315 3056 aa8.16□□□□□ -1.1
KCNC1-202ENST00000379472 ZZEF1O43149 2961 aa8.14□□□□□ -1.11
KCNC1-202ENST00000379472 WDFY3Q8IZQ1 3526 aa8.13□□□□□ -1.11
KCNC1-202ENST00000379472 ADGRG4Q8IZF6 3080 aa8.12□□□□□ -1.11
KCNC1-202ENST00000379472 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
KCNC1-202ENST00000379472 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
KCNC1-202ENST00000379472 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
KCNC1-202ENST00000379472 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
KCNC1-202ENST00000379472 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
KCNC1-202ENST00000379472 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
KCNC1-202ENST00000379472 DCHS1Q96JQ0 3298 aa8.01□□□□□ -1.13
KCNC1-202ENST00000379472 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
KCNC1-202ENST00000379472 CELSR2Q9HCU4 2923 aa7.97□□□□□ -1.13
KCNC1-202ENST00000379472 ASPMQ8IZT6 3477 aa7.97□□□□□ -1.13
KCNC1-202ENST00000379472 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
KCNC1-202ENST00000379472 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.14
KCNC1-202ENST00000379472 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
KCNC1-202ENST00000379472 LAMA5O15230 3695 aa7.88□□□□□ -1.15
KCNC1-202ENST00000379472 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
KCNC1-202ENST00000379472 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
KCNC1-202ENST00000379472 CELSR1Q9NYQ6 3014 aa7.86□□□□□ -1.15
KCNC1-202ENST00000379472 FLNCQ14315 2725 aa7.83□□□□□ -1.16
KCNC1-202ENST00000379472 TGP01266 2768 aa7.81□□□□□ -1.16
KCNC1-202ENST00000379472 CSMD1Q96PZ7 3565 aa7.77□□□□□ -1.17
KCNC1-202ENST00000379472 DCHS2Q6V1P9 2916 aa7.76□□□□□ -1.17
KCNC1-202ENST00000379472 ZFHX4Q86UP3 3567 aa7.75□□□□□ -1.17
KCNC1-202ENST00000379472 TENM4Q6N022 2769 aa7.71□□□□□ -1.18
KCNC1-202ENST00000379472 NF1P21359 2839 aa7.7□□□□□ -1.18
KCNC1-202ENST00000379472 FBN2P35556 2912 aa7.68□□□□□ -1.18
KCNC1-202ENST00000379472 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.18
KCNC1-202ENST00000379472 DMDP11532 3685 aa7.62□□□□□ -1.19
KCNC1-202ENST00000379472 RELNP78509 3460 aa7.61□□□□□ -1.19
KCNC1-202ENST00000379472 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
KCNC1-202ENST00000379472 PDZD2O15018 2839 aa7.59□□□□□ -1.19
KCNC1-202ENST00000379472 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
KCNC1-202ENST00000379472 SPENQ96T58 3664 aaKnown RBP7.57□□□□□ -1.2
KCNC1-202ENST00000379472 ZANQ9Y493 2812 aa7.55□□□□□ -1.2
KCNC1-202ENST00000379472 SMG1Q96Q15 3661 aaKnown RBP7.51□□□□□ -1.21
KCNC1-202ENST00000379472 MXRA5Q9NR99 2828 aa7.47□□□□□ -1.21
KCNC1-202ENST00000379472 INE1O15225 51 aa7.46□□□□□ -1.21
KCNC1-202ENST00000379472 TENM2Q9NT68 2774 aa7.44□□□□□ -1.22
KCNC1-202ENST00000379472 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
KCNC1-202ENST00000379472 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
KCNC1-202ENST00000379472 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
KCNC1-202ENST00000379472 VWFP04275 2813 aa7.32□□□□□ -1.24
KCNC1-202ENST00000379472 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
KCNC1-202ENST00000379472 SVEP1Q4LDE5 3571 aa7.3□□□□□ -1.24
KCNC1-202ENST00000379472 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
KCNC1-202ENST00000379472 MUC3AQ02505 3323 aa7.23□□□□□ -1.25
KCNC1-202ENST00000379472 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
KCNC1-202ENST00000379472 CUBNO60494 3623 aa7.2□□□□□ -1.26
KCNC1-202ENST00000379472 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
KCNC1-202ENST00000379472 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
KCNC1-202ENST00000379472 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
KCNC1-202ENST00000379472 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
KCNC1-202ENST00000379472 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
KCNC1-202ENST00000379472 COL7A1Q02388 2944 aa7.07□□□□□ -1.28
KCNC1-202ENST00000379472 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
KCNC1-202ENST00000379472 TRRAPQ9Y4A5 3859 aa7□□□□□ -1.29
KCNC1-202ENST00000379472 CSMD2Q7Z408 3487 aa6.99□□□□□ -1.29
KCNC1-202ENST00000379472 BSNQ9UPA5 3926 aa6.97□□□□□ -1.29
KCNC1-202ENST00000379472 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
KCNC1-202ENST00000379472 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
KCNC1-202ENST00000379472 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
KCNC1-202ENST00000379472 FBN3Q75N90 2809 aa6.9□□□□□ -1.31
KCNC1-202ENST00000379472 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
KCNC1-202ENST00000379472 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
KCNC1-202ENST00000379472 OTOGQ6ZRI0 2925 aa6.68□□□□□ -1.34
KCNC1-202ENST00000379472 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
KCNC1-202ENST00000379472 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
KCNC1-202ENST00000379472 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms