RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 Q5W150 140 aa6.59□□□□□ -1.35
USP6NL-202ENST00000379237 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
USP6NL-202ENST00000379237 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
USP6NL-202ENST00000379237 ROMO1P60602 79 aa6.57□□□□□ -1.36
USP6NL-202ENST00000379237 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
USP6NL-202ENST00000379237 Q8N1X5 172 aa6.53□□□□□ -1.36
USP6NL-202ENST00000379237 KRTAP1-3Q8IUG1 177 aa6.53□□□□□ -1.36
USP6NL-202ENST00000379237 KRTAP10-11P60412 298 aa6.53□□□□□ -1.36
USP6NL-202ENST00000379237 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
USP6NL-202ENST00000379237 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
USP6NL-202ENST00000379237 ZNF861PO60384 105 aa6.52□□□□□ -1.37
USP6NL-202ENST00000379237 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
USP6NL-202ENST00000379237 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
USP6NL-202ENST00000379237 Q96NJ1 140 aa6.5□□□□□ -1.37
USP6NL-202ENST00000379237 ITPR2Q14571 2701 aa6.5□□□□□ -1.37
USP6NL-202ENST00000379237 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
USP6NL-202ENST00000379237 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
USP6NL-202ENST00000379237 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
USP6NL-202ENST00000379237 A0A1B0GU33 70 aa6.47□□□□□ -1.37
USP6NL-202ENST00000379237 ANK2Q01484 3957 aa6.46□□□□□ -1.37
USP6NL-202ENST00000379237 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
USP6NL-202ENST00000379237 A8MUU9 505 aa6.41□□□□□ -1.38
USP6NL-202ENST00000379237 ANK3Q12955 4377 aaKnown RBP6.41□□□□□ -1.38
USP6NL-202ENST00000379237 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
USP6NL-202ENST00000379237 OTOGQ6ZRI0 2925 aa6.39□□□□□ -1.39
USP6NL-202ENST00000379237 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
USP6NL-202ENST00000379237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.38□□□□□ -1.39
USP6NL-202ENST00000379237 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
USP6NL-202ENST00000379237 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
USP6NL-202ENST00000379237 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
USP6NL-202ENST00000379237 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
USP6NL-202ENST00000379237 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
USP6NL-202ENST00000379237 VWFP04275 2813 aa6.35□□□□□ -1.39
USP6NL-202ENST00000379237 PANO1I0J062 215 aa6.35□□□□□ -1.39
USP6NL-202ENST00000379237 A0A0D9SG42 100 aa6.35□□□□□ -1.39
USP6NL-202ENST00000379237 PDZD2O15018 2839 aa6.34□□□□□ -1.39
USP6NL-202ENST00000379237 KMT2BQ9UMN6 2715 aaPredicted RBP6.34□□□□□ -1.39
USP6NL-202ENST00000379237 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
USP6NL-202ENST00000379237 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
USP6NL-202ENST00000379237 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
USP6NL-202ENST00000379237 TENM3Q9P273 2699 aa6.32□□□□□ -1.4
USP6NL-202ENST00000379237 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
USP6NL-202ENST00000379237 A0A087WTM6 91 aa6.3□□□□□ -1.4
USP6NL-202ENST00000379237 SMR3BP02814 79 aaPredicted RBP6.29□□□□□ -1.4
USP6NL-202ENST00000379237 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
USP6NL-202ENST00000379237 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
USP6NL-202ENST00000379237 Q6ZSA8 131 aa6.27□□□□□ -1.41
USP6NL-202ENST00000379237 H0YAA0 97 aa6.26□□□□□ -1.41
USP6NL-202ENST00000379237 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
USP6NL-202ENST00000379237 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
USP6NL-202ENST00000379237 TENM1Q9UKZ4 2725 aa6.23□□□□□ -1.41
USP6NL-202ENST00000379237 M0R2T5 61 aa6.22□□□□□ -1.41
USP6NL-202ENST00000379237 LYSTQ99698 3801 aa6.22□□□□□ -1.41
USP6NL-202ENST00000379237 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
USP6NL-202ENST00000379237 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
USP6NL-202ENST00000379237 TGP01266 2768 aa6.19□□□□□ -1.42
USP6NL-202ENST00000379237 P0C880 135 aa6.19□□□□□ -1.42
USP6NL-202ENST00000379237 RPL37P61927 97 aaKnown RBP6.19□□□□□ -1.42
USP6NL-202ENST00000379237 FBN1P35555 2871 aaKnown RBP6.19□□□□□ -1.42
USP6NL-202ENST00000379237 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
USP6NL-202ENST00000379237 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
USP6NL-202ENST00000379237 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
USP6NL-202ENST00000379237 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
USP6NL-202ENST00000379237 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
USP6NL-202ENST00000379237 DNAH7Q8WXX0 4024 aa6.01□□□□□ -1.45
USP6NL-202ENST00000379237 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
USP6NL-202ENST00000379237 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
USP6NL-202ENST00000379237 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
USP6NL-202ENST00000379237 DNAH3Q8TD57 4116 aa5.95□□□□□ -1.46
USP6NL-202ENST00000379237 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
USP6NL-202ENST00000379237 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
USP6NL-202ENST00000379237 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
USP6NL-202ENST00000379237 R4GN34 69 aa5.87□□□□□ -1.47
USP6NL-202ENST00000379237 S4R3F8 94 aa5.87□□□□□ -1.47
USP6NL-202ENST00000379237 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
USP6NL-202ENST00000379237 DNHD1Q96M86 4753 aa5.84□□□□□ -1.47
USP6NL-202ENST00000379237 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.47
USP6NL-202ENST00000379237 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
USP6NL-202ENST00000379237 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
USP6NL-202ENST00000379237 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
USP6NL-202ENST00000379237 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
USP6NL-202ENST00000379237 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
USP6NL-202ENST00000379237 Q5VSD8 79 aa5.75□□□□□ -1.49
USP6NL-202ENST00000379237 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
USP6NL-202ENST00000379237 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
USP6NL-202ENST00000379237 MEGF8Q7Z7M0 2845 aa5.73□□□□□ -1.49
USP6NL-202ENST00000379237 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.5
USP6NL-202ENST00000379237 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
USP6NL-202ENST00000379237 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
USP6NL-202ENST00000379237 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
USP6NL-202ENST00000379237 M0QZ58 72 aa5.67□□□□□ -1.5
USP6NL-202ENST00000379237 HUWE1Q7Z6Z7 4374 aaKnown RBP5.66□□□□□ -1.5
USP6NL-202ENST00000379237 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
USP6NL-202ENST00000379237 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
USP6NL-202ENST00000379237 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
USP6NL-202ENST00000379237 STARD9Q9P2P6 4700 aa5.62□□□□□ -1.51
USP6NL-202ENST00000379237 PLECQ15149 4684 aaKnown RBP5.6□□□□□ -1.51
USP6NL-202ENST00000379237 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
USP6NL-202ENST00000379237 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
USP6NL-202ENST00000379237 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms