RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
SHROOM1-203ENST00000378679 J3QL48 77 aa8.56□□□□□ -1.04
SHROOM1-203ENST00000378679 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
SHROOM1-203ENST00000378679 Q1T7F1 81 aa8.56□□□□□ -1.04
SHROOM1-203ENST00000378679 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
SHROOM1-203ENST00000378679 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
SHROOM1-203ENST00000378679 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
SHROOM1-203ENST00000378679 ANK3Q12955 4377 aaKnown RBP8.54□□□□□ -1.04
SHROOM1-203ENST00000378679 A8MU10 97 aa8.53□□□□□ -1.04
SHROOM1-203ENST00000378679 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
SHROOM1-203ENST00000378679 LINC00472Q9H8W2 130 aa8.53□□□□□ -1.04
SHROOM1-203ENST00000378679 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
SHROOM1-203ENST00000378679 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
SHROOM1-203ENST00000378679 Q5VV11 94 aa8.49□□□□□ -1.05
SHROOM1-203ENST00000378679 PRAC1Q96KF2 57 aa8.48□□□□□ -1.05
SHROOM1-203ENST00000378679 K7ERS5 55 aa8.48□□□□□ -1.05
SHROOM1-203ENST00000378679 MMP24-AS1A0A0U1RRL7 71 aa8.47□□□□□ -1.05
SHROOM1-203ENST00000378679 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
SHROOM1-203ENST00000378679 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
SHROOM1-203ENST00000378679 A0A087X002 238 aa8.41□□□□□ -1.06
SHROOM1-203ENST00000378679 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
SHROOM1-203ENST00000378679 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
SHROOM1-203ENST00000378679 SPINK7P58062 85 aa8.4□□□□□ -1.07
SHROOM1-203ENST00000378679 Q5VSD8 79 aa8.36□□□□□ -1.07
SHROOM1-203ENST00000378679 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
SHROOM1-203ENST00000378679 LCA10Q71F78 164 aa8.35□□□□□ -1.07
SHROOM1-203ENST00000378679 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
SHROOM1-203ENST00000378679 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
SHROOM1-203ENST00000378679 UQCR11O14957 56 aa8.34□□□□□ -1.07
SHROOM1-203ENST00000378679 Q8N1X5 172 aa8.34□□□□□ -1.07
SHROOM1-203ENST00000378679 Q75L30 129 aa8.32□□□□□ -1.08
SHROOM1-203ENST00000378679 HRES1P13985 223 aa8.31□□□□□ -1.08
SHROOM1-203ENST00000378679 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
SHROOM1-203ENST00000378679 KRTAP29-1A8MX34 341 aaPredicted RBP8.25□□□□□ -1.09
SHROOM1-203ENST00000378679 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
SHROOM1-203ENST00000378679 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
SHROOM1-203ENST00000378679 Q5W150 140 aa8.22□□□□□ -1.09
SHROOM1-203ENST00000378679 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
SHROOM1-203ENST00000378679 COX6B2Q6YFQ2 88 aa8.21□□□□□ -1.1
SHROOM1-203ENST00000378679 CRIPTQ9P021 101 aa8.18□□□□□ -1.1
SHROOM1-203ENST00000378679 Q6ZSA8 131 aa8.17□□□□□ -1.1
SHROOM1-203ENST00000378679 FBN3Q75N90 2809 aa8.17□□□□□ -1.1
SHROOM1-203ENST00000378679 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
SHROOM1-203ENST00000378679 LINC01554Q52M75 96 aa8.15□□□□□ -1.11
SHROOM1-203ENST00000378679 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
SHROOM1-203ENST00000378679 SPINT4Q6UDR6 99 aa8.13□□□□□ -1.11
SHROOM1-203ENST00000378679 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
SHROOM1-203ENST00000378679 A0A0D9SG42 100 aa8.08□□□□□ -1.12
SHROOM1-203ENST00000378679 A6NN06 94 aa8.04□□□□□ -1.12
SHROOM1-203ENST00000378679 RPS29P62273 56 aaKnown RBP8.01□□□□□ -1.13
SHROOM1-203ENST00000378679 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
SHROOM1-203ENST00000378679 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
SHROOM1-203ENST00000378679 ANK2Q01484 3957 aa8□□□□□ -1.13
SHROOM1-203ENST00000378679 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
SHROOM1-203ENST00000378679 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
SHROOM1-203ENST00000378679 A0A1B0GU33 70 aa7.91□□□□□ -1.14
SHROOM1-203ENST00000378679 DNAH10Q8IVF4 4471 aa7.87□□□□□ -1.15
SHROOM1-203ENST00000378679 S4R3F8 94 aa7.85□□□□□ -1.15
SHROOM1-203ENST00000378679 LYSTQ99698 3801 aa7.83□□□□□ -1.16
SHROOM1-203ENST00000378679 SPATA8Q6RVD6 105 aa7.82□□□□□ -1.16
SHROOM1-203ENST00000378679 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
SHROOM1-203ENST00000378679 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
SHROOM1-203ENST00000378679 M0R2T5 61 aa7.77□□□□□ -1.17
SHROOM1-203ENST00000378679 A8MUU9 505 aa7.75□□□□□ -1.17
SHROOM1-203ENST00000378679 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
SHROOM1-203ENST00000378679 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
SHROOM1-203ENST00000378679 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
SHROOM1-203ENST00000378679 R4GN34 69 aa7.64□□□□□ -1.19
SHROOM1-203ENST00000378679 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
SHROOM1-203ENST00000378679 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
SHROOM1-203ENST00000378679 H1FX-AS1Q4G0G2 97 aa7.62□□□□□ -1.19
SHROOM1-203ENST00000378679 XP32Q5T750 250 aa7.61□□□□□ -1.19
SHROOM1-203ENST00000378679 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
SHROOM1-203ENST00000378679 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
SHROOM1-203ENST00000378679 DNHD1Q96M86 4753 aa7.57□□□□□ -1.2
SHROOM1-203ENST00000378679 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
SHROOM1-203ENST00000378679 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
SHROOM1-203ENST00000378679 DNAH7Q8WXX0 4024 aa7.52□□□□□ -1.21
SHROOM1-203ENST00000378679 M0QZ58 72 aa7.52□□□□□ -1.21
SHROOM1-203ENST00000378679 ROMO1P60602 79 aa7.52□□□□□ -1.21
SHROOM1-203ENST00000378679 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
SHROOM1-203ENST00000378679 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
SHROOM1-203ENST00000378679 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
SHROOM1-203ENST00000378679 STARD9Q9P2P6 4700 aa7.48□□□□□ -1.21
SHROOM1-203ENST00000378679 KMT2AQ03164 3969 aa7.47□□□□□ -1.21
SHROOM1-203ENST00000378679 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.22
SHROOM1-203ENST00000378679 NDUFAF8A1L188 74 aa7.44□□□□□ -1.22
SHROOM1-203ENST00000378679 H0YAA0 97 aa7.42□□□□□ -1.22
SHROOM1-203ENST00000378679 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
SHROOM1-203ENST00000378679 DNAH11Q96DT5 4516 aa7.41□□□□□ -1.22
SHROOM1-203ENST00000378679 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.22
SHROOM1-203ENST00000378679 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
SHROOM1-203ENST00000378679 LUZP6Q538Z0 58 aa7.32□□□□□ -1.24
SHROOM1-203ENST00000378679 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
SHROOM1-203ENST00000378679 DNAH3Q8TD57 4116 aa7.26□□□□□ -1.25
SHROOM1-203ENST00000378679 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
SHROOM1-203ENST00000378679 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
SHROOM1-203ENST00000378679 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
SHROOM1-203ENST00000378679 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
SHROOM1-203ENST00000378679 LRP1BQ9NZR2 4599 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms