RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 HIVEP1P15822 2718 aa10.86□□□□□ -0.67
CNTNAP3B-203ENST00000377561 ASB16-AS1Q495Z4 193 aa10.85□□□□□ -0.67
CNTNAP3B-203ENST00000377561 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
CNTNAP3B-203ENST00000377561 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
CNTNAP3B-203ENST00000377561 ASH1LQ9NR48 2969 aaKnown RBP10.82□□□□□ -0.68
CNTNAP3B-203ENST00000377561 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
CNTNAP3B-203ENST00000377561 DMXL1Q9Y485 3027 aa10.81□□□□□ -0.68
CNTNAP3B-203ENST00000377561 HRNRQ86YZ3 2850 aaPredicted RBP10.8□□□□□ -0.68
CNTNAP3B-203ENST00000377561 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
CNTNAP3B-203ENST00000377561 NIPBLQ6KC79 2804 aaeCLIP10.79□□□□□ -0.68
CNTNAP3B-203ENST00000377561 USP34Q70CQ2 3546 aa10.78□□□□□ -0.68
CNTNAP3B-203ENST00000377561 PLAC4Q8WY50 150 aa10.77□□□□□ -0.68
CNTNAP3B-203ENST00000377561 CFAP47Q6ZTR5 3102 aa10.76□□□□□ -0.69
CNTNAP3B-203ENST00000377561 A6NN06 94 aa10.74□□□□□ -0.69
CNTNAP3B-203ENST00000377561 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
CNTNAP3B-203ENST00000377561 RPS29P62273 56 aaKnown RBP10.7□□□□□ -0.7
CNTNAP3B-203ENST00000377561 CELSR2Q9HCU4 2923 aa10.69□□□□□ -0.7
CNTNAP3B-203ENST00000377561 A8MU10 97 aa10.69□□□□□ -0.7
CNTNAP3B-203ENST00000377561 LOC400499M0QZD8 3231 aa10.69□□□□□ -0.7
CNTNAP3B-203ENST00000377561 SPATA8Q6RVD6 105 aa10.69□□□□□ -0.7
CNTNAP3B-203ENST00000377561 KRTAP13-2Q52LG2 175 aa10.66□□□□□ -0.7
CNTNAP3B-203ENST00000377561 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
CNTNAP3B-203ENST00000377561 FBN2P35556 2912 aa10.5□□□□□ -0.73
CNTNAP3B-203ENST00000377561 KRTAP16-1A8MUX0 517 aa10.48□□□□□ -0.73
CNTNAP3B-203ENST00000377561 MYO15AQ9UKN7 3530 aa10.48□□□□□ -0.73
CNTNAP3B-203ENST00000377561 NF1P21359 2839 aa10.47□□□□□ -0.73
CNTNAP3B-203ENST00000377561 TENM4Q6N022 2769 aa10.45□□□□□ -0.74
CNTNAP3B-203ENST00000377561 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
CNTNAP3B-203ENST00000377561 A8MUU9 505 aa10.42□□□□□ -0.74
CNTNAP3B-203ENST00000377561 KRTAP25-1Q3LHN0 102 aa10.41□□□□□ -0.74
CNTNAP3B-203ENST00000377561 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
CNTNAP3B-203ENST00000377561 MXRA5Q9NR99 2828 aa10.31□□□□□ -0.76
CNTNAP3B-203ENST00000377561 C20orf166-AS1Q96NR2 134 aa10.3□□□□□ -0.76
CNTNAP3B-203ENST00000377561 KRTAP1-4P0C5Y4 121 aa10.24□□□□□ -0.77
CNTNAP3B-203ENST00000377561 RELNP78509 3460 aa10.19□□□□□ -0.78
CNTNAP3B-203ENST00000377561 NDUFAF8A1L188 74 aa10.13□□□□□ -0.79
CNTNAP3B-203ENST00000377561 TNP1P09430 55 aa10.13□□□□□ -0.79
CNTNAP3B-203ENST00000377561 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
CNTNAP3B-203ENST00000377561 CELSR1Q9NYQ6 3014 aa10.11□□□□□ -0.79
CNTNAP3B-203ENST00000377561 TENM3Q9P273 2699 aa10.08□□□□□ -0.8
CNTNAP3B-203ENST00000377561 LAMA5O15230 3695 aa9.97□□□□□ -0.81
CNTNAP3B-203ENST00000377561 ZFHX4Q86UP3 3567 aa9.97□□□□□ -0.81
CNTNAP3B-203ENST00000377561 DCHS1Q96JQ0 3298 aa9.96□□□□□ -0.81
CNTNAP3B-203ENST00000377561 C10orf95Q9H7T3 257 aa9.96□□□□□ -0.81
CNTNAP3B-203ENST00000377561 PDZD2O15018 2839 aa9.95□□□□□ -0.82
CNTNAP3B-203ENST00000377561 XP32Q5T750 250 aa9.94□□□□□ -0.82
CNTNAP3B-203ENST00000377561 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
CNTNAP3B-203ENST00000377561 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
CNTNAP3B-203ENST00000377561 DMDP11532 3685 aa9.84□□□□□ -0.83
CNTNAP3B-203ENST00000377561 TENM2Q9NT68 2774 aa9.82□□□□□ -0.84
CNTNAP3B-203ENST00000377561 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
CNTNAP3B-203ENST00000377561 PP632Q6XCG6 107 aa9.82□□□□□ -0.84
CNTNAP3B-203ENST00000377561 H0YAA0 97 aa9.81□□□□□ -0.84
CNTNAP3B-203ENST00000377561 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
CNTNAP3B-203ENST00000377561 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
CNTNAP3B-203ENST00000377561 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
CNTNAP3B-203ENST00000377561 MUC3AQ02505 3323 aa9.74□□□□□ -0.85
CNTNAP3B-203ENST00000377561 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
CNTNAP3B-203ENST00000377561 TGP01266 2768 aa9.73□□□□□ -0.85
CNTNAP3B-203ENST00000377561 SMG1Q96Q15 3661 aaKnown RBP9.72□□□□□ -0.85
CNTNAP3B-203ENST00000377561 OTOGQ6ZRI0 2925 aa9.66□□□□□ -0.86
CNTNAP3B-203ENST00000377561 VWFP04275 2813 aa9.65□□□□□ -0.86
CNTNAP3B-203ENST00000377561 NBPF19A0A087WUL8 3843 aa9.62□□□□□ -0.87
CNTNAP3B-203ENST00000377561 PKD1L1Q8TDX9 2849 aa9.61□□□□□ -0.87
CNTNAP3B-203ENST00000377561 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
CNTNAP3B-203ENST00000377561 FBN1P35555 2871 aaKnown RBP9.57□□□□□ -0.88
CNTNAP3B-203ENST00000377561 P0C880 135 aa9.54□□□□□ -0.88
CNTNAP3B-203ENST00000377561 ANK3Q12955 4377 aaKnown RBP9.53□□□□□ -0.88
CNTNAP3B-203ENST00000377561 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
CNTNAP3B-203ENST00000377561 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
CNTNAP3B-203ENST00000377561 SPENQ96T58 3664 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-203ENST00000377561 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
CNTNAP3B-203ENST00000377561 BSNQ9UPA5 3926 aa9.27□□□□□ -0.92
CNTNAP3B-203ENST00000377561 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
CNTNAP3B-203ENST00000377561 CSMD2Q7Z408 3487 aa9.24□□□□□ -0.93
CNTNAP3B-203ENST00000377561 FBN3Q75N90 2809 aa9.21□□□□□ -0.93
CNTNAP3B-203ENST00000377561 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
CNTNAP3B-203ENST00000377561 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
CNTNAP3B-203ENST00000377561 CUBNO60494 3623 aa9.13□□□□□ -0.95
CNTNAP3B-203ENST00000377561 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
CNTNAP3B-203ENST00000377561 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
CNTNAP3B-203ENST00000377561 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
CNTNAP3B-203ENST00000377561 KRTAP13-4Q3LI77 160 aa8.96□□□□□ -0.97
CNTNAP3B-203ENST00000377561 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
CNTNAP3B-203ENST00000377561 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
CNTNAP3B-203ENST00000377561 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
CNTNAP3B-203ENST00000377561 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
CNTNAP3B-203ENST00000377561 VPS13CQ709C8 3753 aa8.84□□□□□ -1
CNTNAP3B-203ENST00000377561 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
CNTNAP3B-203ENST00000377561 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
CNTNAP3B-203ENST00000377561 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
CNTNAP3B-203ENST00000377561 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
CNTNAP3B-203ENST00000377561 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
CNTNAP3B-203ENST00000377561 DNAH9Q9NYC9 4486 aa8.53□□□□□ -1.04
CNTNAP3B-203ENST00000377561 ALMS1Q8TCU4 4167 aa8.52□□□□□ -1.05
CNTNAP3B-203ENST00000377561 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
CNTNAP3B-203ENST00000377561 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
CNTNAP3B-203ENST00000377561 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
CNTNAP3B-203ENST00000377561 CSMD3Q7Z407 3707 aa8.33□□□□□ -1.08
CNTNAP3B-203ENST00000377561 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms