RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
ABCF1-202ENST00000376545 A6NED7 52 aa6.38□□□□□ -1.39
ABCF1-202ENST00000376545 ZNF861PO60384 105 aa6.37□□□□□ -1.39
ABCF1-202ENST00000376545 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
ABCF1-202ENST00000376545 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
ABCF1-202ENST00000376545 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
ABCF1-202ENST00000376545 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
ABCF1-202ENST00000376545 LCA10Q71F78 164 aa6.34□□□□□ -1.39
ABCF1-202ENST00000376545 NDUFS5O43920 106 aa6.32□□□□□ -1.4
ABCF1-202ENST00000376545 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
ABCF1-202ENST00000376545 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
ABCF1-202ENST00000376545 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
ABCF1-202ENST00000376545 MRPL34Q9BQ48 92 aaKnown RBP6.31□□□□□ -1.4
ABCF1-202ENST00000376545 ANAPC11Q9NYG5 84 aa6.31□□□□□ -1.4
ABCF1-202ENST00000376545 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
ABCF1-202ENST00000376545 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
ABCF1-202ENST00000376545 A0A087X002 238 aa6.3□□□□□ -1.4
ABCF1-202ENST00000376545 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
ABCF1-202ENST00000376545 A6NN06 94 aa6.29□□□□□ -1.4
ABCF1-202ENST00000376545 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
ABCF1-202ENST00000376545 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
ABCF1-202ENST00000376545 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
ABCF1-202ENST00000376545 LIMD2Q9BT23 127 aa6.28□□□□□ -1.4
ABCF1-202ENST00000376545 COA5Q86WW8 74 aa6.28□□□□□ -1.4
ABCF1-202ENST00000376545 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
ABCF1-202ENST00000376545 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
ABCF1-202ENST00000376545 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
ABCF1-202ENST00000376545 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
ABCF1-202ENST00000376545 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
ABCF1-202ENST00000376545 PKD1P98161 4303 aa6.25□□□□□ -1.41
ABCF1-202ENST00000376545 LOC101927531A0A1B0GV80 90 aa6.25□□□□□ -1.41
ABCF1-202ENST00000376545 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
ABCF1-202ENST00000376545 Q5W150 140 aa6.21□□□□□ -1.41
ABCF1-202ENST00000376545 Q75L30 129 aa6.21□□□□□ -1.41
ABCF1-202ENST00000376545 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
ABCF1-202ENST00000376545 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
ABCF1-202ENST00000376545 HRES1P13985 223 aa6.2□□□□□ -1.42
ABCF1-202ENST00000376545 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
ABCF1-202ENST00000376545 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
ABCF1-202ENST00000376545 LINC00313P59037 77 aa6.19□□□□□ -1.42
ABCF1-202ENST00000376545 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
ABCF1-202ENST00000376545 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
ABCF1-202ENST00000376545 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
ABCF1-202ENST00000376545 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
ABCF1-202ENST00000376545 Q6ZSA8 131 aa6.18□□□□□ -1.42
ABCF1-202ENST00000376545 TGP01266 2768 aa6.17□□□□□ -1.42
ABCF1-202ENST00000376545 KRTAP10-2P60368 255 aa6.17□□□□□ -1.42
ABCF1-202ENST00000376545 SPINK6Q6UWN8 80 aa6.17□□□□□ -1.42
ABCF1-202ENST00000376545 DNHD1Q96M86 4753 aa6.17□□□□□ -1.42
ABCF1-202ENST00000376545 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
ABCF1-202ENST00000376545 SPINK7P58062 85 aa6.15□□□□□ -1.43
ABCF1-202ENST00000376545 LINC01554Q52M75 96 aa6.15□□□□□ -1.43
ABCF1-202ENST00000376545 LY6G6CO95867 125 aa6.14□□□□□ -1.43
ABCF1-202ENST00000376545 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
ABCF1-202ENST00000376545 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
ABCF1-202ENST00000376545 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
ABCF1-202ENST00000376545 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
ABCF1-202ENST00000376545 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
ABCF1-202ENST00000376545 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
ABCF1-202ENST00000376545 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
ABCF1-202ENST00000376545 ACYP2P14621 99 aa6.08□□□□□ -1.44
ABCF1-202ENST00000376545 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
ABCF1-202ENST00000376545 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
ABCF1-202ENST00000376545 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
ABCF1-202ENST00000376545 SPINK1P00995 79 aa5.98□□□□□ -1.45
ABCF1-202ENST00000376545 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
ABCF1-202ENST00000376545 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.45
ABCF1-202ENST00000376545 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.45
ABCF1-202ENST00000376545 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
ABCF1-202ENST00000376545 PKHD1P08F94 4074 aa5.96□□□□□ -1.46
ABCF1-202ENST00000376545 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
ABCF1-202ENST00000376545 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
ABCF1-202ENST00000376545 APOBP04114 4563 aaKnown RBP5.91□□□□□ -1.46
ABCF1-202ENST00000376545 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
ABCF1-202ENST00000376545 A0A1B0GU69 56 aa5.89□□□□□ -1.47
ABCF1-202ENST00000376545 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
ABCF1-202ENST00000376545 LINC00304Q8N9R0 145 aa5.88□□□□□ -1.47
ABCF1-202ENST00000376545 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
ABCF1-202ENST00000376545 KRTAP10-4P60372 401 aaPredicted RBP5.84□□□□□ -1.47
ABCF1-202ENST00000376545 A8MUU9 505 aa5.83□□□□□ -1.48
ABCF1-202ENST00000376545 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
ABCF1-202ENST00000376545 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
ABCF1-202ENST00000376545 UQCR11O14957 56 aa5.81□□□□□ -1.48
ABCF1-202ENST00000376545 FAT1Q14517 4588 aa5.8□□□□□ -1.48
ABCF1-202ENST00000376545 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
ABCF1-202ENST00000376545 Q8N1X5 172 aa5.77□□□□□ -1.49
ABCF1-202ENST00000376545 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
ABCF1-202ENST00000376545 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
ABCF1-202ENST00000376545 ROMO1P60602 79 aa5.74□□□□□ -1.49
ABCF1-202ENST00000376545 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
ABCF1-202ENST00000376545 RYR2Q92736 4967 aa5.71□□□□□ -1.5
ABCF1-202ENST00000376545 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
ABCF1-202ENST00000376545 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
ABCF1-202ENST00000376545 TNXBP22105 4242 aa5.69□□□□□ -1.5
ABCF1-202ENST00000376545 HSPG2P98160 4391 aa5.65□□□□□ -1.51
ABCF1-202ENST00000376545 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
ABCF1-202ENST00000376545 H0YAA0 97 aa5.64□□□□□ -1.51
ABCF1-202ENST00000376545 P0C880 135 aa5.62□□□□□ -1.51
ABCF1-202ENST00000376545 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
ABCF1-202ENST00000376545 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms