RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.09
MCF2L-204ENST00000375608 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
MCF2L-204ENST00000375608 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
MCF2L-204ENST00000375608 LY6G6CO95867 125 aa8.24□□□□□ -1.09
MCF2L-204ENST00000375608 Q5W150 140 aa8.24□□□□□ -1.09
MCF2L-204ENST00000375608 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
MCF2L-204ENST00000375608 ZNF861PO60384 105 aa8.24□□□□□ -1.09
MCF2L-204ENST00000375608 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-204ENST00000375608 LINC00313P59037 77 aa8.22□□□□□ -1.09
MCF2L-204ENST00000375608 A0A087WTM6 91 aa8.22□□□□□ -1.09
MCF2L-204ENST00000375608 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.1
MCF2L-204ENST00000375608 NUPR2A6NF83 97 aa8.2□□□□□ -1.1
MCF2L-204ENST00000375608 Q96NJ1 140 aa8.2□□□□□ -1.1
MCF2L-204ENST00000375608 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-204ENST00000375608 FBN3Q75N90 2809 aa8.18□□□□□ -1.1
MCF2L-204ENST00000375608 A6NN06 94 aa8.16□□□□□ -1.1
MCF2L-204ENST00000375608 Q6ZR54 194 aa8.16□□□□□ -1.1
MCF2L-204ENST00000375608 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
MCF2L-204ENST00000375608 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
MCF2L-204ENST00000375608 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
MCF2L-204ENST00000375608 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
MCF2L-204ENST00000375608 IGLV7-43P04211 117 aa8.1□□□□□ -1.11
MCF2L-204ENST00000375608 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
MCF2L-204ENST00000375608 Q8N1X5 172 aa8.09□□□□□ -1.11
MCF2L-204ENST00000375608 UQCR11O14957 56 aa8.09□□□□□ -1.11
MCF2L-204ENST00000375608 DNAH10Q8IVF4 4471 aa8.06□□□□□ -1.12
MCF2L-204ENST00000375608 ANK2Q01484 3957 aa8.03□□□□□ -1.12
MCF2L-204ENST00000375608 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
MCF2L-204ENST00000375608 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-204ENST00000375608 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
MCF2L-204ENST00000375608 MEGF8Q7Z7M0 2845 aa7.99□□□□□ -1.13
MCF2L-204ENST00000375608 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
MCF2L-204ENST00000375608 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
MCF2L-204ENST00000375608 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
MCF2L-204ENST00000375608 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
MCF2L-204ENST00000375608 DMAC1Q96GE9 116 aa7.96□□□□□ -1.13
MCF2L-204ENST00000375608 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
MCF2L-204ENST00000375608 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
MCF2L-204ENST00000375608 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
MCF2L-204ENST00000375608 LYSTQ99698 3801 aa7.9□□□□□ -1.15
MCF2L-204ENST00000375608 KRTAP10-2P60368 255 aa7.9□□□□□ -1.15
MCF2L-204ENST00000375608 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
MCF2L-204ENST00000375608 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
MCF2L-204ENST00000375608 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
MCF2L-204ENST00000375608 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
MCF2L-204ENST00000375608 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
MCF2L-204ENST00000375608 K7ERS5 55 aa7.8□□□□□ -1.16
MCF2L-204ENST00000375608 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
MCF2L-204ENST00000375608 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
MCF2L-204ENST00000375608 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
MCF2L-204ENST00000375608 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
MCF2L-204ENST00000375608 A0A1B0GU33 70 aa7.72□□□□□ -1.17
MCF2L-204ENST00000375608 A0A0D9SG42 100 aa7.7□□□□□ -1.18
MCF2L-204ENST00000375608 PLECQ15149 4684 aaKnown RBP7.68□□□□□ -1.18
MCF2L-204ENST00000375608 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
MCF2L-204ENST00000375608 DNAH7Q8WXX0 4024 aa7.6□□□□□ -1.19
MCF2L-204ENST00000375608 Q6ZSA8 131 aa7.6□□□□□ -1.19
MCF2L-204ENST00000375608 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
MCF2L-204ENST00000375608 DNHD1Q96M86 4753 aa7.58□□□□□ -1.2
MCF2L-204ENST00000375608 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
MCF2L-204ENST00000375608 KRTAP1-4P0C5Y4 121 aa7.56□□□□□ -1.2
MCF2L-204ENST00000375608 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
MCF2L-204ENST00000375608 H0YAA0 97 aa7.55□□□□□ -1.2
MCF2L-204ENST00000375608 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
MCF2L-204ENST00000375608 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
MCF2L-204ENST00000375608 DNAH1Q9P2D7 4330 aa7.53□□□□□ -1.2
MCF2L-204ENST00000375608 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
MCF2L-204ENST00000375608 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
MCF2L-204ENST00000375608 DNAH11Q96DT5 4516 aa7.48□□□□□ -1.21
MCF2L-204ENST00000375608 PRKDCP78527 4128 aaKnown RBP7.48□□□□□ -1.21
MCF2L-204ENST00000375608 KMT2AQ03164 3969 aa7.47□□□□□ -1.21
MCF2L-204ENST00000375608 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
MCF2L-204ENST00000375608 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
MCF2L-204ENST00000375608 A8MUU9 505 aa7.44□□□□□ -1.22
MCF2L-204ENST00000375608 ROMO1P60602 79 aa7.41□□□□□ -1.22
MCF2L-204ENST00000375608 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
MCF2L-204ENST00000375608 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
MCF2L-204ENST00000375608 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
MCF2L-204ENST00000375608 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
MCF2L-204ENST00000375608 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
MCF2L-204ENST00000375608 LRP1BQ9NZR2 4599 aa7.33□□□□□ -1.24
MCF2L-204ENST00000375608 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
MCF2L-204ENST00000375608 HECTD4Q9Y4D8 3996 aa7.3□□□□□ -1.24
MCF2L-204ENST00000375608 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
MCF2L-204ENST00000375608 VPS13DQ5THJ4 4388 aa7.29□□□□□ -1.24
MCF2L-204ENST00000375608 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
MCF2L-204ENST00000375608 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
MCF2L-204ENST00000375608 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
MCF2L-204ENST00000375608 ALMS1Q8TCU4 4167 aa7.24□□□□□ -1.25
MCF2L-204ENST00000375608 S4R3F8 94 aa7.23□□□□□ -1.25
MCF2L-204ENST00000375608 P0C880 135 aa7.19□□□□□ -1.26
MCF2L-204ENST00000375608 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
MCF2L-204ENST00000375608 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
MCF2L-204ENST00000375608 FAT1Q14517 4588 aa7.13□□□□□ -1.27
MCF2L-204ENST00000375608 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
MCF2L-204ENST00000375608 DNAH5Q8TE73 4624 aa7.09□□□□□ -1.27
MCF2L-204ENST00000375608 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
MCF2L-204ENST00000375608 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
MCF2L-204ENST00000375608 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
MCF2L-204ENST00000375608 Q5VSD8 79 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms