RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
CUL4A-203ENST00000375441 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
CUL4A-203ENST00000375441 KTN1-AS1Q86SY8 53 aa7.86□□□□□ -1.15
CUL4A-203ENST00000375441 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
CUL4A-203ENST00000375441 A0A087X002 238 aa7.85□□□□□ -1.15
CUL4A-203ENST00000375441 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
CUL4A-203ENST00000375441 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
CUL4A-203ENST00000375441 A8MU10 97 aa7.85□□□□□ -1.15
CUL4A-203ENST00000375441 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
CUL4A-203ENST00000375441 Q6ZR54 194 aa7.84□□□□□ -1.15
CUL4A-203ENST00000375441 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
CUL4A-203ENST00000375441 Q96NJ1 140 aa7.82□□□□□ -1.16
CUL4A-203ENST00000375441 SPINK7P58062 85 aa7.8□□□□□ -1.16
CUL4A-203ENST00000375441 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
CUL4A-203ENST00000375441 LCA10Q71F78 164 aa7.79□□□□□ -1.16
CUL4A-203ENST00000375441 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
CUL4A-203ENST00000375441 Q5W150 140 aa7.77□□□□□ -1.17
CUL4A-203ENST00000375441 UQCR11O14957 56 aa7.74□□□□□ -1.17
CUL4A-203ENST00000375441 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
CUL4A-203ENST00000375441 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.17
CUL4A-203ENST00000375441 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.18
CUL4A-203ENST00000375441 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
CUL4A-203ENST00000375441 Q8N1X5 172 aa7.66□□□□□ -1.18
CUL4A-203ENST00000375441 KRTAP10-2P60368 255 aa7.65□□□□□ -1.18
CUL4A-203ENST00000375441 ASB16-AS1Q495Z4 193 aa7.65□□□□□ -1.18
CUL4A-203ENST00000375441 DMBT1Q9UGM3 2413 aaPredicted RBP7.65□□□□□ -1.19
CUL4A-203ENST00000375441 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
CUL4A-203ENST00000375441 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
CUL4A-203ENST00000375441 K7ERS5 55 aa7.61□□□□□ -1.19
CUL4A-203ENST00000375441 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
CUL4A-203ENST00000375441 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
CUL4A-203ENST00000375441 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.19
CUL4A-203ENST00000375441 A6NN06 94 aa7.59□□□□□ -1.19
CUL4A-203ENST00000375441 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
CUL4A-203ENST00000375441 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
CUL4A-203ENST00000375441 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
CUL4A-203ENST00000375441 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
CUL4A-203ENST00000375441 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
CUL4A-203ENST00000375441 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
CUL4A-203ENST00000375441 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
CUL4A-203ENST00000375441 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
CUL4A-203ENST00000375441 MEGF8Q7Z7M0 2845 aa7.39□□□□□ -1.23
CUL4A-203ENST00000375441 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
CUL4A-203ENST00000375441 A0A1B0GU33 70 aa7.38□□□□□ -1.23
CUL4A-203ENST00000375441 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
CUL4A-203ENST00000375441 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
CUL4A-203ENST00000375441 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
CUL4A-203ENST00000375441 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
CUL4A-203ENST00000375441 Q6ZSA8 131 aa7.3□□□□□ -1.24
CUL4A-203ENST00000375441 KRTAP21-3Q3LHN1 58 aa7.28□□□□□ -1.24
CUL4A-203ENST00000375441 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
CUL4A-203ENST00000375441 A0A0D9SG42 100 aa7.24□□□□□ -1.25
CUL4A-203ENST00000375441 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.25
CUL4A-203ENST00000375441 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
CUL4A-203ENST00000375441 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
CUL4A-203ENST00000375441 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
CUL4A-203ENST00000375441 ANK2Q01484 3957 aa7.16□□□□□ -1.26
CUL4A-203ENST00000375441 DNHD1Q96M86 4753 aa7.15□□□□□ -1.26
CUL4A-203ENST00000375441 A8MUU9 505 aa7.13□□□□□ -1.27
CUL4A-203ENST00000375441 H3BS24 57 aa7.13□□□□□ -1.27
CUL4A-203ENST00000375441 Q5VSD8 79 aa7.12□□□□□ -1.27
CUL4A-203ENST00000375441 J3QL48 77 aa7.12□□□□□ -1.27
CUL4A-203ENST00000375441 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
CUL4A-203ENST00000375441 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
CUL4A-203ENST00000375441 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
CUL4A-203ENST00000375441 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
CUL4A-203ENST00000375441 H0YAA0 97 aa7.07□□□□□ -1.28
CUL4A-203ENST00000375441 S4R3F8 94 aa7.05□□□□□ -1.28
CUL4A-203ENST00000375441 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
CUL4A-203ENST00000375441 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
CUL4A-203ENST00000375441 ROMO1P60602 79 aa7□□□□□ -1.29
CUL4A-203ENST00000375441 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
CUL4A-203ENST00000375441 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.29
CUL4A-203ENST00000375441 LYSTQ99698 3801 aa6.96□□□□□ -1.29
CUL4A-203ENST00000375441 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
CUL4A-203ENST00000375441 CMYA5Q8N3K9 4069 aa6.93□□□□□ -1.3
CUL4A-203ENST00000375441 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
CUL4A-203ENST00000375441 STARD9Q9P2P6 4700 aa6.89□□□□□ -1.31
CUL4A-203ENST00000375441 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
CUL4A-203ENST00000375441 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
CUL4A-203ENST00000375441 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
CUL4A-203ENST00000375441 DNAH17Q9UFH2 4485 aa6.83□□□□□ -1.32
CUL4A-203ENST00000375441 DNAH7Q8WXX0 4024 aa6.8□□□□□ -1.32
CUL4A-203ENST00000375441 XP32Q5T750 250 aa6.79□□□□□ -1.32
CUL4A-203ENST00000375441 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
CUL4A-203ENST00000375441 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
CUL4A-203ENST00000375441 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
CUL4A-203ENST00000375441 R4GN34 69 aa6.74□□□□□ -1.33
CUL4A-203ENST00000375441 P0C880 135 aa6.73□□□□□ -1.33
CUL4A-203ENST00000375441 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
CUL4A-203ENST00000375441 M0QZ58 72 aa6.72□□□□□ -1.33
CUL4A-203ENST00000375441 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CUL4A-203ENST00000375441 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
CUL4A-203ENST00000375441 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
CUL4A-203ENST00000375441 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
CUL4A-203ENST00000375441 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
CUL4A-203ENST00000375441 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
CUL4A-203ENST00000375441 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
CUL4A-203ENST00000375441 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
CUL4A-203ENST00000375441 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms