RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 COL12A1Q99715 3063 aa11.32□□□□□ -0.6
COL15A1-201ENST00000375001 A8MUU9 505 aa11.28□□□□□ -0.6
COL15A1-201ENST00000375001 Q5VSD8 79 aa11.28□□□□□ -0.6
COL15A1-201ENST00000375001 SPEGQ15772 3267 aa11.24□□□□□ -0.61
COL15A1-201ENST00000375001 CFAP47Q6ZTR5 3102 aa11.23□□□□□ -0.61
COL15A1-201ENST00000375001 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
COL15A1-201ENST00000375001 ITPR2Q14571 2701 aa11.21□□□□□ -0.61
COL15A1-201ENST00000375001 APCP25054 2843 aa11.21□□□□□ -0.61
COL15A1-201ENST00000375001 REV3LO60673 3130 aa11.17□□□□□ -0.62
COL15A1-201ENST00000375001 HIVEP1P15822 2718 aa11.16□□□□□ -0.62
COL15A1-201ENST00000375001 ZZEF1O43149 2961 aa11.16□□□□□ -0.62
COL15A1-201ENST00000375001 C10orf95Q9H7T3 257 aa11.15□□□□□ -0.62
COL15A1-201ENST00000375001 CELSR2Q9HCU4 2923 aa11.07□□□□□ -0.64
COL15A1-201ENST00000375001 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
COL15A1-201ENST00000375001 KRTAP13-1Q8IUC0 172 aa11.04□□□□□ -0.64
COL15A1-201ENST00000375001 TNP1P09430 55 aa10.98□□□□□ -0.65
COL15A1-201ENST00000375001 ZANQ9Y493 2812 aa10.98□□□□□ -0.65
COL15A1-201ENST00000375001 EYSQ5T1H1 3165 aa10.96□□□□□ -0.65
COL15A1-201ENST00000375001 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
COL15A1-201ENST00000375001 NIPBLQ6KC79 2804 aaeCLIP10.94□□□□□ -0.66
COL15A1-201ENST00000375001 RPS29P62273 56 aaKnown RBP10.94□□□□□ -0.66
COL15A1-201ENST00000375001 SPTBN5Q9NRC6 3674 aaKnown RBP10.92□□□□□ -0.66
COL15A1-201ENST00000375001 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
COL15A1-201ENST00000375001 LOC400499M0QZD8 3231 aa10.84□□□□□ -0.67
COL15A1-201ENST00000375001 KMT2BQ9UMN6 2715 aaPredicted RBP10.83□□□□□ -0.68
COL15A1-201ENST00000375001 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
COL15A1-201ENST00000375001 TNRC18O15417 2968 aaPredicted RBP10.82□□□□□ -0.68
COL15A1-201ENST00000375001 HRNRQ86YZ3 2850 aaPredicted RBP10.8□□□□□ -0.68
COL15A1-201ENST00000375001 CRYBG3Q68DQ2 2970 aa10.79□□□□□ -0.68
COL15A1-201ENST00000375001 FBN2P35556 2912 aa10.77□□□□□ -0.68
COL15A1-201ENST00000375001 P0C880 135 aa10.76□□□□□ -0.69
COL15A1-201ENST00000375001 DMXL1Q9Y485 3027 aa10.75□□□□□ -0.69
COL15A1-201ENST00000375001 MYO15AQ9UKN7 3530 aa10.74□□□□□ -0.69
COL15A1-201ENST00000375001 H0YAA0 97 aa10.74□□□□□ -0.69
COL15A1-201ENST00000375001 PP632Q6XCG6 107 aa10.74□□□□□ -0.69
COL15A1-201ENST00000375001 NF1P21359 2839 aa10.69□□□□□ -0.7
COL15A1-201ENST00000375001 KRTAP10-8P60410 259 aa10.65□□□□□ -0.7
COL15A1-201ENST00000375001 TENM4Q6N022 2769 aa10.62□□□□□ -0.71
COL15A1-201ENST00000375001 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
COL15A1-201ENST00000375001 KRTAP1-4P0C5Y4 121 aa10.41□□□□□ -0.74
COL15A1-201ENST00000375001 MXRA5Q9NR99 2828 aa10.39□□□□□ -0.75
COL15A1-201ENST00000375001 DCHS1Q96JQ0 3298 aa10.38□□□□□ -0.75
COL15A1-201ENST00000375001 RELNP78509 3460 aa10.35□□□□□ -0.75
COL15A1-201ENST00000375001 CELSR1Q9NYQ6 3014 aa10.34□□□□□ -0.75
COL15A1-201ENST00000375001 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
COL15A1-201ENST00000375001 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
COL15A1-201ENST00000375001 XP32Q5T750 250 aa10.29□□□□□ -0.76
COL15A1-201ENST00000375001 ZFHX4Q86UP3 3567 aa10.24□□□□□ -0.77
COL15A1-201ENST00000375001 TENM1Q9UKZ4 2725 aa10.24□□□□□ -0.77
COL15A1-201ENST00000375001 TGP01266 2768 aa10.24□□□□□ -0.77
COL15A1-201ENST00000375001 ASPMQ8IZT6 3477 aa10.15□□□□□ -0.78
COL15A1-201ENST00000375001 CSMD1Q96PZ7 3565 aa10.12□□□□□ -0.79
COL15A1-201ENST00000375001 KRTAP13-3Q3SY46 172 aa10.1□□□□□ -0.79
COL15A1-201ENST00000375001 LAMA5O15230 3695 aa10.06□□□□□ -0.8
COL15A1-201ENST00000375001 PDZD2O15018 2839 aa10.04□□□□□ -0.8
COL15A1-201ENST00000375001 TENM2Q9NT68 2774 aa10.02□□□□□ -0.8
COL15A1-201ENST00000375001 PRO2289Q9P1D8 64 aa10.02□□□□□ -0.81
COL15A1-201ENST00000375001 KRTAP12-2P59991 146 aa10.02□□□□□ -0.81
COL15A1-201ENST00000375001 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
COL15A1-201ENST00000375001 PKD1L1Q8TDX9 2849 aa9.98□□□□□ -0.81
COL15A1-201ENST00000375001 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
COL15A1-201ENST00000375001 SMG1Q96Q15 3661 aaKnown RBP9.92□□□□□ -0.82
COL15A1-201ENST00000375001 VWFP04275 2813 aa9.88□□□□□ -0.83
COL15A1-201ENST00000375001 KRTAP13-4Q3LI77 160 aa9.8□□□□□ -0.84
COL15A1-201ENST00000375001 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
COL15A1-201ENST00000375001 DMDP11532 3685 aa9.78□□□□□ -0.84
COL15A1-201ENST00000375001 KRTAP21-3Q3LHN1 58 aa9.78□□□□□ -0.84
COL15A1-201ENST00000375001 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
COL15A1-201ENST00000375001 SVEP1Q4LDE5 3571 aa9.75□□□□□ -0.85
COL15A1-201ENST00000375001 CUBNO60494 3623 aa9.7□□□□□ -0.86
COL15A1-201ENST00000375001 MUC3AQ02505 3323 aa9.65□□□□□ -0.86
COL15A1-201ENST00000375001 NBPF19A0A087WUL8 3843 aa9.62□□□□□ -0.87
COL15A1-201ENST00000375001 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
COL15A1-201ENST00000375001 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
COL15A1-201ENST00000375001 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
COL15A1-201ENST00000375001 OTOGQ6ZRI0 2925 aa9.46□□□□□ -0.89
COL15A1-201ENST00000375001 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.89
COL15A1-201ENST00000375001 ZFHX3Q15911 3703 aa9.42□□□□□ -0.9
COL15A1-201ENST00000375001 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
COL15A1-201ENST00000375001 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
COL15A1-201ENST00000375001 INE1O15225 51 aa9.36□□□□□ -0.91
COL15A1-201ENST00000375001 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
COL15A1-201ENST00000375001 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
COL15A1-201ENST00000375001 ANK3Q12955 4377 aaKnown RBP9.29□□□□□ -0.92
COL15A1-201ENST00000375001 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
COL15A1-201ENST00000375001 COL7A1Q02388 2944 aa9.23□□□□□ -0.93
COL15A1-201ENST00000375001 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.96
COL15A1-201ENST00000375001 BSNQ9UPA5 3926 aa9□□□□□ -0.97
COL15A1-201ENST00000375001 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
COL15A1-201ENST00000375001 VPS13CQ709C8 3753 aa8.91□□□□□ -0.98
COL15A1-201ENST00000375001 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
COL15A1-201ENST00000375001 MT1HL1P0DM35 61 aa8.81□□□□□ -1
COL15A1-201ENST00000375001 KRTAP10-12P60413 245 aa8.8□□□□□ -1
COL15A1-201ENST00000375001 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
COL15A1-201ENST00000375001 CSMD3Q7Z407 3707 aa8.71□□□□□ -1.02
COL15A1-201ENST00000375001 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
COL15A1-201ENST00000375001 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
COL15A1-201ENST00000375001 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
COL15A1-201ENST00000375001 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
COL15A1-201ENST00000375001 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms