RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 A8MUU9 505 aa9.75□□□□□ -0.85
PTEN-201ENST00000371953 HIVEP1P15822 2718 aa9.75□□□□□ -0.85
PTEN-201ENST00000371953 Q5VSD8 79 aa9.75□□□□□ -0.85
PTEN-201ENST00000371953 FLNCQ14315 2725 aa9.75□□□□□ -0.85
PTEN-201ENST00000371953 CELSR2Q9HCU4 2923 aa9.74□□□□□ -0.85
PTEN-201ENST00000371953 M0QZ58 72 aa9.73□□□□□ -0.85
PTEN-201ENST00000371953 C20orf166-AS1Q96NR2 134 aa9.72□□□□□ -0.85
PTEN-201ENST00000371953 PDZD2O15018 2839 aa9.71□□□□□ -0.86
PTEN-201ENST00000371953 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
PTEN-201ENST00000371953 NF1P21359 2839 aa9.67□□□□□ -0.86
PTEN-201ENST00000371953 TNRC18O15417 2968 aaPredicted RBP9.66□□□□□ -0.86
PTEN-201ENST00000371953 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
PTEN-201ENST00000371953 TGP01266 2768 aa9.65□□□□□ -0.86
PTEN-201ENST00000371953 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
PTEN-201ENST00000371953 ZZEF1O43149 2961 aa9.65□□□□□ -0.86
PTEN-201ENST00000371953 WDFY3Q8IZQ1 3526 aa9.62□□□□□ -0.87
PTEN-201ENST00000371953 CFAP47Q6ZTR5 3102 aa9.61□□□□□ -0.87
PTEN-201ENST00000371953 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
PTEN-201ENST00000371953 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
PTEN-201ENST00000371953 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
PTEN-201ENST00000371953 ATMQ13315 3056 aa9.51□□□□□ -0.89
PTEN-201ENST00000371953 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
PTEN-201ENST00000371953 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
PTEN-201ENST00000371953 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
PTEN-201ENST00000371953 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
PTEN-201ENST00000371953 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.89
PTEN-201ENST00000371953 PP632Q6XCG6 107 aa9.46□□□□□ -0.9
PTEN-201ENST00000371953 DCHS2Q6V1P9 2916 aa9.46□□□□□ -0.9
PTEN-201ENST00000371953 MYO15AQ9UKN7 3530 aa9.45□□□□□ -0.9
PTEN-201ENST00000371953 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
PTEN-201ENST00000371953 EYSQ5T1H1 3165 aa9.42□□□□□ -0.9
PTEN-201ENST00000371953 FBN2P35556 2912 aa9.41□□□□□ -0.9
PTEN-201ENST00000371953 NBPF19A0A087WUL8 3843 aa9.39□□□□□ -0.91
PTEN-201ENST00000371953 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
PTEN-201ENST00000371953 ZFHX3Q15911 3703 aa9.37□□□□□ -0.91
PTEN-201ENST00000371953 C10orf95Q9H7T3 257 aa9.33□□□□□ -0.92
PTEN-201ENST00000371953 LAMA5O15230 3695 aa9.29□□□□□ -0.92
PTEN-201ENST00000371953 CELSR1Q9NYQ6 3014 aa9.26□□□□□ -0.93
PTEN-201ENST00000371953 P0C880 135 aa9.26□□□□□ -0.93
PTEN-201ENST00000371953 H0YAA0 97 aa9.25□□□□□ -0.93
PTEN-201ENST00000371953 TNP1P09430 55 aa9.23□□□□□ -0.93
PTEN-201ENST00000371953 MXRA5Q9NR99 2828 aa9.23□□□□□ -0.93
PTEN-201ENST00000371953 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
PTEN-201ENST00000371953 LOC400499M0QZD8 3231 aa9.19□□□□□ -0.94
PTEN-201ENST00000371953 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
PTEN-201ENST00000371953 DMDP11532 3685 aa9.12□□□□□ -0.95
PTEN-201ENST00000371953 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
PTEN-201ENST00000371953 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
PTEN-201ENST00000371953 DCHS1Q96JQ0 3298 aa9.05□□□□□ -0.96
PTEN-201ENST00000371953 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
PTEN-201ENST00000371953 SMG1Q96Q15 3661 aaKnown RBP8.96□□□□□ -0.98
PTEN-201ENST00000371953 ZFHX4Q86UP3 3567 aa8.95□□□□□ -0.98
PTEN-201ENST00000371953 PKD1L1Q8TDX9 2849 aa8.94□□□□□ -0.98
PTEN-201ENST00000371953 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
PTEN-201ENST00000371953 CSMD1Q96PZ7 3565 aa8.91□□□□□ -0.98
PTEN-201ENST00000371953 VWFP04275 2813 aa8.9□□□□□ -0.98
PTEN-201ENST00000371953 RELNP78509 3460 aa8.89□□□□□ -0.99
PTEN-201ENST00000371953 KRTAP21-3Q3LHN1 58 aa8.83□□□□□ -1
PTEN-201ENST00000371953 TENM4Q6N022 2769 aa8.81□□□□□ -1
PTEN-201ENST00000371953 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
PTEN-201ENST00000371953 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
PTEN-201ENST00000371953 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
PTEN-201ENST00000371953 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
PTEN-201ENST00000371953 XP32Q5T750 250 aa8.59□□□□□ -1.03
PTEN-201ENST00000371953 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
PTEN-201ENST00000371953 VPS13CQ709C8 3753 aa8.59□□□□□ -1.03
PTEN-201ENST00000371953 AKAP9Q99996 3911 aa8.59□□□□□ -1.04
PTEN-201ENST00000371953 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
PTEN-201ENST00000371953 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
PTEN-201ENST00000371953 INE1O15225 51 aa8.48□□□□□ -1.05
PTEN-201ENST00000371953 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
PTEN-201ENST00000371953 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
PTEN-201ENST00000371953 BSNQ9UPA5 3926 aa8.46□□□□□ -1.05
PTEN-201ENST00000371953 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
PTEN-201ENST00000371953 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
PTEN-201ENST00000371953 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
PTEN-201ENST00000371953 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
PTEN-201ENST00000371953 CUBNO60494 3623 aa8.42□□□□□ -1.06
PTEN-201ENST00000371953 FBN1P35555 2871 aaKnown RBP8.38□□□□□ -1.07
PTEN-201ENST00000371953 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
PTEN-201ENST00000371953 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
PTEN-201ENST00000371953 OTOGQ6ZRI0 2925 aa8.35□□□□□ -1.07
PTEN-201ENST00000371953 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
PTEN-201ENST00000371953 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
PTEN-201ENST00000371953 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
PTEN-201ENST00000371953 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
PTEN-201ENST00000371953 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
PTEN-201ENST00000371953 ALMS1Q8TCU4 4167 aa7.96□□□□□ -1.14
PTEN-201ENST00000371953 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
PTEN-201ENST00000371953 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
PTEN-201ENST00000371953 ZNF469Q96JG9 3925 aaPredicted RBP7.85□□□□□ -1.15
PTEN-201ENST00000371953 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
PTEN-201ENST00000371953 ANK3Q12955 4377 aaKnown RBP7.56□□□□□ -1.2
PTEN-201ENST00000371953 LYSTQ99698 3801 aa7.56□□□□□ -1.2
PTEN-201ENST00000371953 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
PTEN-201ENST00000371953 CMYA5Q8N3K9 4069 aa7.51□□□□□ -1.21
PTEN-201ENST00000371953 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
PTEN-201ENST00000371953 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
PTEN-201ENST00000371953 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
PTEN-201ENST00000371953 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms