RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 S4R3F8 94 aa6.9□□□□□ -1.3
DEPDC1-201ENST00000370966 TNRC18O15417 2968 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1-201ENST00000370966 DMXL1Q9Y485 3027 aa6.88□□□□□ -1.31
DEPDC1-201ENST00000370966 Q5VSD8 79 aa6.88□□□□□ -1.31
DEPDC1-201ENST00000370966 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
DEPDC1-201ENST00000370966 A8MU10 97 aa6.87□□□□□ -1.31
DEPDC1-201ENST00000370966 HRNRQ86YZ3 2850 aaPredicted RBP6.87□□□□□ -1.31
DEPDC1-201ENST00000370966 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
DEPDC1-201ENST00000370966 NF1P21359 2839 aa6.86□□□□□ -1.31
DEPDC1-201ENST00000370966 A6NN06 94 aa6.85□□□□□ -1.31
DEPDC1-201ENST00000370966 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
DEPDC1-201ENST00000370966 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
DEPDC1-201ENST00000370966 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
DEPDC1-201ENST00000370966 FBN2P35556 2912 aa6.81□□□□□ -1.32
DEPDC1-201ENST00000370966 LOC400499M0QZD8 3231 aa6.8□□□□□ -1.32
DEPDC1-201ENST00000370966 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
DEPDC1-201ENST00000370966 R4GN34 69 aa6.77□□□□□ -1.33
DEPDC1-201ENST00000370966 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
DEPDC1-201ENST00000370966 CRYBG3Q68DQ2 2970 aa6.75□□□□□ -1.33
DEPDC1-201ENST00000370966 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
DEPDC1-201ENST00000370966 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
DEPDC1-201ENST00000370966 DMDP11532 3685 aa6.75□□□□□ -1.33
DEPDC1-201ENST00000370966 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
DEPDC1-201ENST00000370966 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
DEPDC1-201ENST00000370966 M0R2T5 61 aa6.71□□□□□ -1.33
DEPDC1-201ENST00000370966 MUC3AQ02505 3323 aa6.69□□□□□ -1.34
DEPDC1-201ENST00000370966 ROMO1P60602 79 aa6.69□□□□□ -1.34
DEPDC1-201ENST00000370966 ASPMQ8IZT6 3477 aa6.68□□□□□ -1.34
DEPDC1-201ENST00000370966 MXRA5Q9NR99 2828 aa6.68□□□□□ -1.34
DEPDC1-201ENST00000370966 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
DEPDC1-201ENST00000370966 TENM3Q9P273 2699 aa6.64□□□□□ -1.35
DEPDC1-201ENST00000370966 M0QZ58 72 aa6.63□□□□□ -1.35
DEPDC1-201ENST00000370966 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
DEPDC1-201ENST00000370966 ZFHX4Q86UP3 3567 aa6.56□□□□□ -1.36
DEPDC1-201ENST00000370966 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
DEPDC1-201ENST00000370966 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
DEPDC1-201ENST00000370966 A8MUU9 505 aa6.55□□□□□ -1.36
DEPDC1-201ENST00000370966 DCHS1Q96JQ0 3298 aa6.55□□□□□ -1.36
DEPDC1-201ENST00000370966 CELSR1Q9NYQ6 3014 aa6.55□□□□□ -1.36
DEPDC1-201ENST00000370966 C20orf166-AS1Q96NR2 134 aa6.54□□□□□ -1.36
DEPDC1-201ENST00000370966 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
DEPDC1-201ENST00000370966 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
DEPDC1-201ENST00000370966 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
DEPDC1-201ENST00000370966 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
DEPDC1-201ENST00000370966 LAMA5O15230 3695 aa6.45□□□□□ -1.38
DEPDC1-201ENST00000370966 RELNP78509 3460 aa6.42□□□□□ -1.38
DEPDC1-201ENST00000370966 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
DEPDC1-201ENST00000370966 SMG1Q96Q15 3661 aaKnown RBP6.39□□□□□ -1.39
DEPDC1-201ENST00000370966 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
DEPDC1-201ENST00000370966 PDZD2O15018 2839 aa6.38□□□□□ -1.39
DEPDC1-201ENST00000370966 PKD1L1Q8TDX9 2849 aa6.36□□□□□ -1.39
DEPDC1-201ENST00000370966 BSNQ9UPA5 3926 aa6.36□□□□□ -1.39
DEPDC1-201ENST00000370966 TGP01266 2768 aa6.34□□□□□ -1.39
DEPDC1-201ENST00000370966 XP32Q5T750 250 aa6.31□□□□□ -1.4
DEPDC1-201ENST00000370966 CSMD1Q96PZ7 3565 aa6.27□□□□□ -1.41
DEPDC1-201ENST00000370966 VWFP04275 2813 aa6.26□□□□□ -1.41
DEPDC1-201ENST00000370966 FBN1P35555 2871 aaKnown RBP6.25□□□□□ -1.41
DEPDC1-201ENST00000370966 SVEP1Q4LDE5 3571 aa6.24□□□□□ -1.41
DEPDC1-201ENST00000370966 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
DEPDC1-201ENST00000370966 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.41
DEPDC1-201ENST00000370966 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.41
DEPDC1-201ENST00000370966 H0YAA0 97 aa6.19□□□□□ -1.42
DEPDC1-201ENST00000370966 TNP1P09430 55 aa6.18□□□□□ -1.42
DEPDC1-201ENST00000370966 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
DEPDC1-201ENST00000370966 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
DEPDC1-201ENST00000370966 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
DEPDC1-201ENST00000370966 CUBNO60494 3623 aa6.06□□□□□ -1.44
DEPDC1-201ENST00000370966 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
DEPDC1-201ENST00000370966 P0C880 135 aa6.04□□□□□ -1.44
DEPDC1-201ENST00000370966 FBN3Q75N90 2809 aa6.02□□□□□ -1.45
DEPDC1-201ENST00000370966 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
DEPDC1-201ENST00000370966 NBPF19A0A087WUL8 3843 aa6□□□□□ -1.45
DEPDC1-201ENST00000370966 ZFHX3Q15911 3703 aa6□□□□□ -1.45
DEPDC1-201ENST00000370966 VPS13CQ709C8 3753 aa5.92□□□□□ -1.46
DEPDC1-201ENST00000370966 MEGF8Q7Z7M0 2845 aa5.89□□□□□ -1.47
DEPDC1-201ENST00000370966 ANK3Q12955 4377 aaKnown RBP5.87□□□□□ -1.47
DEPDC1-201ENST00000370966 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
DEPDC1-201ENST00000370966 CSMD2Q7Z408 3487 aa5.85□□□□□ -1.47
DEPDC1-201ENST00000370966 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
DEPDC1-201ENST00000370966 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
DEPDC1-201ENST00000370966 AKAP9Q99996 3911 aa5.8□□□□□ -1.48
DEPDC1-201ENST00000370966 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
DEPDC1-201ENST00000370966 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
DEPDC1-201ENST00000370966 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
DEPDC1-201ENST00000370966 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
DEPDC1-201ENST00000370966 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
DEPDC1-201ENST00000370966 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
DEPDC1-201ENST00000370966 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
DEPDC1-201ENST00000370966 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
DEPDC1-201ENST00000370966 ZNF469Q96JG9 3925 aaPredicted RBP5.53□□□□□ -1.52
DEPDC1-201ENST00000370966 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
DEPDC1-201ENST00000370966 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
DEPDC1-201ENST00000370966 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
DEPDC1-201ENST00000370966 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
DEPDC1-201ENST00000370966 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
DEPDC1-201ENST00000370966 ANK2Q01484 3957 aa5.34□□□□□ -1.55
DEPDC1-201ENST00000370966 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
DEPDC1-201ENST00000370966 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
DEPDC1-201ENST00000370966 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
DEPDC1-201ENST00000370966 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms