RNA–Protein interactions for RNA: ENST00000369151.7

CACUL1-201, Transcript of CDK2 associated cullin domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACUL1, Length 11,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-201ENST00000369151 HTTP42858 3142 aa6.95□□□□□ -1.3
CACUL1-201ENST00000369151 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
CACUL1-201ENST00000369151 COL6A3P12111 3177 aa6.91□□□□□ -1.3
CACUL1-201ENST00000369151 BOD1L1Q8NFC6 3051 aa6.91□□□□□ -1.3
CACUL1-201ENST00000369151 Q6ZRN7 208 aaPredicted RBP6.9□□□□□ -1.3
CACUL1-201ENST00000369151 A8MU10 97 aa6.9□□□□□ -1.31
CACUL1-201ENST00000369151 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
CACUL1-201ENST00000369151 TACC2O95359 2948 aa6.85□□□□□ -1.31
CACUL1-201ENST00000369151 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
CACUL1-201ENST00000369151 SPEGQ15772 3267 aa6.82□□□□□ -1.32
CACUL1-201ENST00000369151 ADGRG4Q8IZF6 3080 aa6.82□□□□□ -1.32
CACUL1-201ENST00000369151 KRTAP13-1Q8IUC0 172 aa6.81□□□□□ -1.32
CACUL1-201ENST00000369151 CFAP47Q6ZTR5 3102 aa6.79□□□□□ -1.32
CACUL1-201ENST00000369151 CELSR2Q9HCU4 2923 aa6.79□□□□□ -1.32
CACUL1-201ENST00000369151 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
CACUL1-201ENST00000369151 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.32
CACUL1-201ENST00000369151 ZZEF1O43149 2961 aa6.77□□□□□ -1.33
CACUL1-201ENST00000369151 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
CACUL1-201ENST00000369151 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
CACUL1-201ENST00000369151 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
CACUL1-201ENST00000369151 FLNCQ14315 2725 aa6.74□□□□□ -1.33
CACUL1-201ENST00000369151 NF1P21359 2839 aa6.74□□□□□ -1.33
CACUL1-201ENST00000369151 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
CACUL1-201ENST00000369151 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
CACUL1-201ENST00000369151 ATMQ13315 3056 aa6.71□□□□□ -1.34
CACUL1-201ENST00000369151 NIPBLQ6KC79 2804 aaeCLIP6.7□□□□□ -1.34
CACUL1-201ENST00000369151 SZT2Q5T011 3432 aa6.7□□□□□ -1.34
CACUL1-201ENST00000369151 DMXL1Q9Y485 3027 aa6.69□□□□□ -1.34
CACUL1-201ENST00000369151 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
CACUL1-201ENST00000369151 CELSR1Q9NYQ6 3014 aa6.67□□□□□ -1.34
CACUL1-201ENST00000369151 KRTAP7-1Q8IUC3 87 aa6.66□□□□□ -1.34
CACUL1-201ENST00000369151 TENM3Q9P273 2699 aa6.65□□□□□ -1.35
CACUL1-201ENST00000369151 SPTBN5Q9NRC6 3674 aaKnown RBP6.64□□□□□ -1.35
CACUL1-201ENST00000369151 DCHS2Q6V1P9 2916 aa6.63□□□□□ -1.35
CACUL1-201ENST00000369151 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
CACUL1-201ENST00000369151 P0C880 135 aa6.58□□□□□ -1.36
CACUL1-201ENST00000369151 TGP01266 2768 aa6.58□□□□□ -1.36
CACUL1-201ENST00000369151 XP32Q5T750 250 aa6.56□□□□□ -1.36
CACUL1-201ENST00000369151 EYSQ5T1H1 3165 aa6.55□□□□□ -1.36
CACUL1-201ENST00000369151 H0YAA0 97 aa6.52□□□□□ -1.37
CACUL1-201ENST00000369151 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
CACUL1-201ENST00000369151 TENM4Q6N022 2769 aa6.5□□□□□ -1.37
CACUL1-201ENST00000369151 WDFY3Q8IZQ1 3526 aa6.49□□□□□ -1.37
CACUL1-201ENST00000369151 PDZD2O15018 2839 aa6.47□□□□□ -1.37
CACUL1-201ENST00000369151 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
CACUL1-201ENST00000369151 FBN2P35556 2912 aa6.45□□□□□ -1.38
CACUL1-201ENST00000369151 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
CACUL1-201ENST00000369151 MYO15AQ9UKN7 3530 aa6.42□□□□□ -1.38
CACUL1-201ENST00000369151 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
CACUL1-201ENST00000369151 ASPMQ8IZT6 3477 aa6.39□□□□□ -1.39
CACUL1-201ENST00000369151 LOC400499M0QZD8 3231 aa6.38□□□□□ -1.39
CACUL1-201ENST00000369151 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
CACUL1-201ENST00000369151 LAMA5O15230 3695 aa6.33□□□□□ -1.4
CACUL1-201ENST00000369151 ZFHX4Q86UP3 3567 aa6.33□□□□□ -1.4
CACUL1-201ENST00000369151 HRNRQ86YZ3 2850 aaPredicted RBP6.31□□□□□ -1.4
CACUL1-201ENST00000369151 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
CACUL1-201ENST00000369151 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
CACUL1-201ENST00000369151 VWFP04275 2813 aa6.29□□□□□ -1.4
CACUL1-201ENST00000369151 MXRA5Q9NR99 2828 aa6.28□□□□□ -1.4
CACUL1-201ENST00000369151 DCHS1Q96JQ0 3298 aa6.27□□□□□ -1.41
CACUL1-201ENST00000369151 TENM2Q9NT68 2774 aa6.22□□□□□ -1.41
CACUL1-201ENST00000369151 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
CACUL1-201ENST00000369151 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
CACUL1-201ENST00000369151 RELNP78509 3460 aa6.17□□□□□ -1.42
CACUL1-201ENST00000369151 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
CACUL1-201ENST00000369151 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
CACUL1-201ENST00000369151 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
CACUL1-201ENST00000369151 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
CACUL1-201ENST00000369151 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
CACUL1-201ENST00000369151 SMG1Q96Q15 3661 aaKnown RBP6.04□□□□□ -1.44
CACUL1-201ENST00000369151 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
CACUL1-201ENST00000369151 DMDP11532 3685 aa5.98□□□□□ -1.45
CACUL1-201ENST00000369151 INE1O15225 51 aa5.97□□□□□ -1.45
CACUL1-201ENST00000369151 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
CACUL1-201ENST00000369151 MEGF8Q7Z7M0 2845 aa5.97□□□□□ -1.45
CACUL1-201ENST00000369151 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
CACUL1-201ENST00000369151 SVEP1Q4LDE5 3571 aa5.83□□□□□ -1.48
CACUL1-201ENST00000369151 CUBNO60494 3623 aa5.82□□□□□ -1.48
CACUL1-201ENST00000369151 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
CACUL1-201ENST00000369151 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
CACUL1-201ENST00000369151 VPS13CQ709C8 3753 aa5.79□□□□□ -1.48
CACUL1-201ENST00000369151 MUC3AQ02505 3323 aa5.73□□□□□ -1.49
CACUL1-201ENST00000369151 BSNQ9UPA5 3926 aa5.7□□□□□ -1.5
CACUL1-201ENST00000369151 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
CACUL1-201ENST00000369151 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
CACUL1-201ENST00000369151 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CACUL1-201ENST00000369151 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
CACUL1-201ENST00000369151 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
CACUL1-201ENST00000369151 OTOGQ6ZRI0 2925 aa5.63□□□□□ -1.51
CACUL1-201ENST00000369151 CSMD3Q7Z407 3707 aa5.59□□□□□ -1.52
CACUL1-201ENST00000369151 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
CACUL1-201ENST00000369151 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
CACUL1-201ENST00000369151 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
CACUL1-201ENST00000369151 ANK3Q12955 4377 aaKnown RBP5.35□□□□□ -1.55
CACUL1-201ENST00000369151 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CACUL1-201ENST00000369151 ALMS1Q8TCU4 4167 aa5.35□□□□□ -1.55
CACUL1-201ENST00000369151 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
CACUL1-201ENST00000369151 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
CACUL1-201ENST00000369151 HUWE1Q7Z6Z7 4374 aaKnown RBP5.28□□□□□ -1.56
CACUL1-201ENST00000369151 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms