RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 MRPL34Q9BQ48 92 aaKnown RBP10.49□□□□□ -0.73
CHTOP-203ENST00000368690 LY6G6CO95867 125 aa10.46□□□□□ -0.74
CHTOP-203ENST00000368690 CDK2AP2O75956 126 aa10.45□□□□□ -0.74
CHTOP-203ENST00000368690 SPINK7P58062 85 aa10.45□□□□□ -0.74
CHTOP-203ENST00000368690 IGHV6-1A0A0B4J1U7 121 aa10.45□□□□□ -0.74
CHTOP-203ENST00000368690 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
CHTOP-203ENST00000368690 DNAH10Q8IVF4 4471 aa10.42□□□□□ -0.74
CHTOP-203ENST00000368690 ZNF706Q9Y5V0 76 aaPredicted RBP10.42□□□□□ -0.74
CHTOP-203ENST00000368690 KMT2AQ03164 3969 aa10.37□□□□□ -0.75
CHTOP-203ENST00000368690 KRTAP13-3Q3SY46 172 aa10.36□□□□□ -0.75
CHTOP-203ENST00000368690 SRRM2Q9UQ35 2752 aaKnown RBP10.36□□□□□ -0.75
CHTOP-203ENST00000368690 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
CHTOP-203ENST00000368690 PANO1I0J062 215 aa10.35□□□□□ -0.75
CHTOP-203ENST00000368690 ACYP2P14621 99 aa10.34□□□□□ -0.75
CHTOP-203ENST00000368690 SPACA4Q8TDM5 124 aa10.34□□□□□ -0.75
CHTOP-203ENST00000368690 Q6ZRN7 208 aaPredicted RBP10.33□□□□□ -0.76
CHTOP-203ENST00000368690 A0A087X002 238 aa10.32□□□□□ -0.76
CHTOP-203ENST00000368690 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
CHTOP-203ENST00000368690 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
CHTOP-203ENST00000368690 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
CHTOP-203ENST00000368690 Q5W150 140 aa10.28□□□□□ -0.76
CHTOP-203ENST00000368690 DMAC1Q96GE9 116 aa10.26□□□□□ -0.77
CHTOP-203ENST00000368690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
CHTOP-203ENST00000368690 A0A087WTM6 91 aa10.24□□□□□ -0.77
CHTOP-203ENST00000368690 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
CHTOP-203ENST00000368690 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
CHTOP-203ENST00000368690 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
CHTOP-203ENST00000368690 ZNF861PO60384 105 aa10.22□□□□□ -0.77
CHTOP-203ENST00000368690 DNAH2Q9P225 4427 aa10.21□□□□□ -0.78
CHTOP-203ENST00000368690 LINC00313P59037 77 aa10.21□□□□□ -0.78
CHTOP-203ENST00000368690 PSORS1C2Q9UIG4 136 aa10.21□□□□□ -0.78
CHTOP-203ENST00000368690 PLA2G1BP04054 148 aaKnown RBP10.2□□□□□ -0.78
CHTOP-203ENST00000368690 SPATA8Q6RVD6 105 aa10.18□□□□□ -0.78
CHTOP-203ENST00000368690 A0A1B0GU69 56 aa10.15□□□□□ -0.78
CHTOP-203ENST00000368690 RTL8CO15255 209 aa10.15□□□□□ -0.79
CHTOP-203ENST00000368690 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.79
CHTOP-203ENST00000368690 FAM229AH3BQW9 127 aa10.14□□□□□ -0.79
CHTOP-203ENST00000368690 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
CHTOP-203ENST00000368690 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
CHTOP-203ENST00000368690 IGKV2-30P06310 120 aa10.09□□□□□ -0.79
CHTOP-203ENST00000368690 DNAH6Q9C0G6 4158 aa10.09□□□□□ -0.79
CHTOP-203ENST00000368690 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
CHTOP-203ENST00000368690 SSBP3-AS1Q7Z2R9 100 aa10.09□□□□□ -0.79
CHTOP-203ENST00000368690 FRAS1Q86XX4 4008 aa10.07□□□□□ -0.8
CHTOP-203ENST00000368690 PRAC1Q96KF2 57 aa10.07□□□□□ -0.8
CHTOP-203ENST00000368690 UQCR11O14957 56 aa10.06□□□□□ -0.8
CHTOP-203ENST00000368690 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
CHTOP-203ENST00000368690 MIR22HGQ0VDD5 57 aa10.04□□□□□ -0.8
CHTOP-203ENST00000368690 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
CHTOP-203ENST00000368690 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
CHTOP-203ENST00000368690 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
CHTOP-203ENST00000368690 LINC01554Q52M75 96 aa10□□□□□ -0.81
CHTOP-203ENST00000368690 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
CHTOP-203ENST00000368690 SACSQ9NZJ4 4579 aa9.99□□□□□ -0.81
CHTOP-203ENST00000368690 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
CHTOP-203ENST00000368690 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
CHTOP-203ENST00000368690 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
CHTOP-203ENST00000368690 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
CHTOP-203ENST00000368690 PKD1P98161 4303 aa9.9□□□□□ -0.82
CHTOP-203ENST00000368690 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.83
CHTOP-203ENST00000368690 KRTAP10-1P60331 282 aa9.9□□□□□ -0.83
CHTOP-203ENST00000368690 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.83
CHTOP-203ENST00000368690 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
CHTOP-203ENST00000368690 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
CHTOP-203ENST00000368690 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
CHTOP-203ENST00000368690 RYR2Q92736 4967 aa9.81□□□□□ -0.84
CHTOP-203ENST00000368690 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
CHTOP-203ENST00000368690 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
CHTOP-203ENST00000368690 Q6ZSA8 131 aa9.8□□□□□ -0.84
CHTOP-203ENST00000368690 CSAG1Q6PB30 78 aa9.77□□□□□ -0.85
CHTOP-203ENST00000368690 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
CHTOP-203ENST00000368690 RYR3Q15413 4870 aa9.66□□□□□ -0.86
CHTOP-203ENST00000368690 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
CHTOP-203ENST00000368690 SMR3BP02814 79 aaPredicted RBP9.64□□□□□ -0.87
CHTOP-203ENST00000368690 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
CHTOP-203ENST00000368690 A8MUU9 505 aa9.62□□□□□ -0.87
CHTOP-203ENST00000368690 SPINK1P00995 79 aa9.62□□□□□ -0.87
CHTOP-203ENST00000368690 DYNC1H1Q14204 4646 aaKnown RBP9.59□□□□□ -0.87
CHTOP-203ENST00000368690 H0YAA0 97 aa9.59□□□□□ -0.87
CHTOP-203ENST00000368690 Q8N1X5 172 aa9.59□□□□□ -0.87
CHTOP-203ENST00000368690 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
CHTOP-203ENST00000368690 H3BS24 57 aa9.54□□□□□ -0.88
CHTOP-203ENST00000368690 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
CHTOP-203ENST00000368690 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
CHTOP-203ENST00000368690 LINC00304Q8N9R0 145 aa9.51□□□□□ -0.89
CHTOP-203ENST00000368690 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
CHTOP-203ENST00000368690 A0A1B0GU33 70 aa9.5□□□□□ -0.89
CHTOP-203ENST00000368690 APOBP04114 4563 aaKnown RBP9.49□□□□□ -0.89
CHTOP-203ENST00000368690 H1FX-AS1Q4G0G2 97 aa9.47□□□□□ -0.89
CHTOP-203ENST00000368690 FAT1Q14517 4588 aa9.41□□□□□ -0.9
CHTOP-203ENST00000368690 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
CHTOP-203ENST00000368690 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
CHTOP-203ENST00000368690 ROMO1P60602 79 aa9.37□□□□□ -0.91
CHTOP-203ENST00000368690 KRTAP10-4P60372 401 aaPredicted RBP9.36□□□□□ -0.91
CHTOP-203ENST00000368690 K7ERS5 55 aa9.35□□□□□ -0.91
CHTOP-203ENST00000368690 Q5VSD8 79 aa9.35□□□□□ -0.91
CHTOP-203ENST00000368690 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
CHTOP-203ENST00000368690 HSPG2P98160 4391 aa9.31□□□□□ -0.92
CHTOP-203ENST00000368690 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
CHTOP-203ENST00000368690 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms