RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
PTPRK-203ENST00000368207 A0A0D9SG42 100 aa7.27□□□□□ -1.25
PTPRK-203ENST00000368207 FBN1P35555 2871 aaKnown RBP7.24□□□□□ -1.25
PTPRK-203ENST00000368207 Q1T7F1 81 aa7.23□□□□□ -1.25
PTPRK-203ENST00000368207 SPINK7P58062 85 aa7.22□□□□□ -1.25
PTPRK-203ENST00000368207 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
PTPRK-203ENST00000368207 FP248Q71RG6 208 aaPredicted RBP7.19□□□□□ -1.26
PTPRK-203ENST00000368207 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
PTPRK-203ENST00000368207 PDZD2O15018 2839 aa7.18□□□□□ -1.26
PTPRK-203ENST00000368207 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
PTPRK-203ENST00000368207 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
PTPRK-203ENST00000368207 OTOGQ6ZRI0 2925 aa7.17□□□□□ -1.26
PTPRK-203ENST00000368207 VWFP04275 2813 aa7.15□□□□□ -1.26
PTPRK-203ENST00000368207 TENM2Q9NT68 2774 aa7.15□□□□□ -1.26
PTPRK-203ENST00000368207 ZFHX3Q15911 3703 aa7.15□□□□□ -1.27
PTPRK-203ENST00000368207 Q5XG85 94 aa7.14□□□□□ -1.27
PTPRK-203ENST00000368207 A0A1B0GU33 70 aa7.14□□□□□ -1.27
PTPRK-203ENST00000368207 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
PTPRK-203ENST00000368207 OXTP01178 125 aa7.12□□□□□ -1.27
PTPRK-203ENST00000368207 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
PTPRK-203ENST00000368207 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
PTPRK-203ENST00000368207 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
PTPRK-203ENST00000368207 Q75L30 129 aa7.1□□□□□ -1.27
PTPRK-203ENST00000368207 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
PTPRK-203ENST00000368207 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
PTPRK-203ENST00000368207 CUBNO60494 3623 aa7.08□□□□□ -1.28
PTPRK-203ENST00000368207 TGP01266 2768 aa7.08□□□□□ -1.28
PTPRK-203ENST00000368207 NBPF19A0A087WUL8 3843 aa7.08□□□□□ -1.28
PTPRK-203ENST00000368207 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
PTPRK-203ENST00000368207 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
PTPRK-203ENST00000368207 S4R3F8 94 aa7.06□□□□□ -1.28
PTPRK-203ENST00000368207 M0R2T5 61 aa7.06□□□□□ -1.28
PTPRK-203ENST00000368207 Q5VV11 94 aa7.05□□□□□ -1.28
PTPRK-203ENST00000368207 CSMD2Q7Z408 3487 aa7.05□□□□□ -1.28
PTPRK-203ENST00000368207 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
PTPRK-203ENST00000368207 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
PTPRK-203ENST00000368207 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
PTPRK-203ENST00000368207 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
PTPRK-203ENST00000368207 LCA10Q71F78 164 aa6.98□□□□□ -1.29
PTPRK-203ENST00000368207 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
PTPRK-203ENST00000368207 R4GN34 69 aa6.92□□□□□ -1.3
PTPRK-203ENST00000368207 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
PTPRK-203ENST00000368207 SRRM2Q9UQ35 2752 aaKnown RBP6.89□□□□□ -1.31
PTPRK-203ENST00000368207 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
PTPRK-203ENST00000368207 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
PTPRK-203ENST00000368207 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
PTPRK-203ENST00000368207 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
PTPRK-203ENST00000368207 M0QZ58 72 aa6.81□□□□□ -1.32
PTPRK-203ENST00000368207 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
PTPRK-203ENST00000368207 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
PTPRK-203ENST00000368207 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
PTPRK-203ENST00000368207 A8MUU9 505 aa6.72□□□□□ -1.33
PTPRK-203ENST00000368207 TRRAPQ9Y4A5 3859 aa6.69□□□□□ -1.34
PTPRK-203ENST00000368207 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
PTPRK-203ENST00000368207 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
PTPRK-203ENST00000368207 A8MU10 97 aa6.68□□□□□ -1.34
PTPRK-203ENST00000368207 ROMO1P60602 79 aa6.66□□□□□ -1.34
PTPRK-203ENST00000368207 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
PTPRK-203ENST00000368207 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
PTPRK-203ENST00000368207 XP32Q5T750 250 aa6.6□□□□□ -1.35
PTPRK-203ENST00000368207 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
PTPRK-203ENST00000368207 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
PTPRK-203ENST00000368207 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
PTPRK-203ENST00000368207 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
PTPRK-203ENST00000368207 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
PTPRK-203ENST00000368207 A6NN06 94 aa6.51□□□□□ -1.37
PTPRK-203ENST00000368207 VPS13CQ709C8 3753 aa6.46□□□□□ -1.38
PTPRK-203ENST00000368207 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
PTPRK-203ENST00000368207 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
PTPRK-203ENST00000368207 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
PTPRK-203ENST00000368207 ZNF469Q96JG9 3925 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-203ENST00000368207 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
PTPRK-203ENST00000368207 H0YAA0 97 aa6.3□□□□□ -1.4
PTPRK-203ENST00000368207 P0C880 135 aa6.27□□□□□ -1.41
PTPRK-203ENST00000368207 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
PTPRK-203ENST00000368207 H3BS24 57 aa6.23□□□□□ -1.41
PTPRK-203ENST00000368207 TNP1P09430 55 aa6.22□□□□□ -1.41
PTPRK-203ENST00000368207 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
PTPRK-203ENST00000368207 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
PTPRK-203ENST00000368207 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
PTPRK-203ENST00000368207 HUWE1Q7Z6Z7 4374 aaKnown RBP6.14□□□□□ -1.43
PTPRK-203ENST00000368207 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
PTPRK-203ENST00000368207 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
PTPRK-203ENST00000368207 DNHD1Q96M86 4753 aa6.09□□□□□ -1.43
PTPRK-203ENST00000368207 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
PTPRK-203ENST00000368207 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
PTPRK-203ENST00000368207 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
PTPRK-203ENST00000368207 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
PTPRK-203ENST00000368207 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
PTPRK-203ENST00000368207 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
PTPRK-203ENST00000368207 DNAH9Q9NYC9 4486 aa5.93□□□□□ -1.46
PTPRK-203ENST00000368207 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
PTPRK-203ENST00000368207 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
PTPRK-203ENST00000368207 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-203ENST00000368207 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
PTPRK-203ENST00000368207 PLECQ15149 4684 aaKnown RBP5.83□□□□□ -1.48
PTPRK-203ENST00000368207 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
PTPRK-203ENST00000368207 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
PTPRK-203ENST00000368207 ANK2Q01484 3957 aa5.8□□□□□ -1.48
PTPRK-203ENST00000368207 DNAH11Q96DT5 4516 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms