RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 NSD1Q96L73 2696 aaPredicted RBP4.13□□□□□ -1.75
SPTA1-201ENST00000368147 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
SPTA1-201ENST00000368147 A6NN06 94 aa4.12□□□□□ -1.75
SPTA1-201ENST00000368147 ASH1LQ9NR48 2969 aaKnown RBP4.12□□□□□ -1.75
SPTA1-201ENST00000368147 KALRNO60229 2985 aa4.12□□□□□ -1.75
SPTA1-201ENST00000368147 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
SPTA1-201ENST00000368147 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
SPTA1-201ENST00000368147 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
SPTA1-201ENST00000368147 SPRR1BP22528 89 aa4.09□□□□□ -1.75
SPTA1-201ENST00000368147 TNRC18O15417 2968 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-201ENST00000368147 NBEAL2Q6ZNJ1 2754 aa4.09□□□□□ -1.76
SPTA1-201ENST00000368147 A0A1B0GVY2 172 aa4.09□□□□□ -1.76
SPTA1-201ENST00000368147 A8MUU9 505 aa4.08□□□□□ -1.76
SPTA1-201ENST00000368147 DMXL2Q8TDJ6 3036 aa4.07□□□□□ -1.76
SPTA1-201ENST00000368147 SPRR1AP35321 89 aa4.06□□□□□ -1.76
SPTA1-201ENST00000368147 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
SPTA1-201ENST00000368147 CSMD1Q96PZ7 3565 aa4.05□□□□□ -1.76
SPTA1-201ENST00000368147 DMDP11532 3685 aa4.05□□□□□ -1.76
SPTA1-201ENST00000368147 ZFHX4Q86UP3 3567 aa4.05□□□□□ -1.76
SPTA1-201ENST00000368147 TENM1Q9UKZ4 2725 aa4.05□□□□□ -1.76
SPTA1-201ENST00000368147 ADGRG4Q8IZF6 3080 aa4.05□□□□□ -1.76
SPTA1-201ENST00000368147 KRTAP11-1Q8IUC1 163 aa4.04□□□□□ -1.76
SPTA1-201ENST00000368147 NOTCH2NLQ7Z3S9 236 aa4.03□□□□□ -1.76
SPTA1-201ENST00000368147 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
SPTA1-201ENST00000368147 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.77
SPTA1-201ENST00000368147 RELNP78509 3460 aa4.01□□□□□ -1.77
SPTA1-201ENST00000368147 DMXL1Q9Y485 3027 aa4□□□□□ -1.77
SPTA1-201ENST00000368147 COL12A1Q99715 3063 aa3.99□□□□□ -1.77
SPTA1-201ENST00000368147 ITPR1Q14643 2758 aa3.99□□□□□ -1.77
SPTA1-201ENST00000368147 ZZEF1O43149 2961 aa3.98□□□□□ -1.77
SPTA1-201ENST00000368147 HIVEP1P15822 2718 aa3.97□□□□□ -1.77
SPTA1-201ENST00000368147 A8MU10 97 aa3.96□□□□□ -1.78
SPTA1-201ENST00000368147 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
SPTA1-201ENST00000368147 TACC2O95359 2948 aa3.95□□□□□ -1.78
SPTA1-201ENST00000368147 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
SPTA1-201ENST00000368147 NF1P21359 2839 aa3.94□□□□□ -1.78
SPTA1-201ENST00000368147 TENM4Q6N022 2769 aa3.94□□□□□ -1.78
SPTA1-201ENST00000368147 KRTAP13-2Q52LG2 175 aa3.94□□□□□ -1.78
SPTA1-201ENST00000368147 NBEAQ8NFP9 2946 aa3.93□□□□□ -1.78
SPTA1-201ENST00000368147 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
SPTA1-201ENST00000368147 KRTAP10-8P60410 259 aa3.92□□□□□ -1.78
SPTA1-201ENST00000368147 KRTAP4-16G5E9R7 235 aaPredicted RBP3.92□□□□□ -1.78
SPTA1-201ENST00000368147 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
SPTA1-201ENST00000368147 SMG1Q96Q15 3661 aaKnown RBP3.9□□□□□ -1.79
SPTA1-201ENST00000368147 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
SPTA1-201ENST00000368147 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
SPTA1-201ENST00000368147 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
SPTA1-201ENST00000368147 ZFHX3Q15911 3703 aa3.86□□□□□ -1.79
SPTA1-201ENST00000368147 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.791e-6■□□□□ 9
SPTA1-201ENST00000368147 CELSR1Q9NYQ6 3014 aa3.83□□□□□ -1.8
SPTA1-201ENST00000368147 PKD1L1Q8TDX9 2849 aa3.83□□□□□ -1.8
SPTA1-201ENST00000368147 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
SPTA1-201ENST00000368147 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
SPTA1-201ENST00000368147 DCHS2Q6V1P9 2916 aa3.82□□□□□ -1.8
SPTA1-201ENST00000368147 XP32Q5T750 250 aa3.79□□□□□ -1.8
SPTA1-201ENST00000368147 VWFP04275 2813 aa3.78□□□□□ -1.8
SPTA1-201ENST00000368147 BSNQ9UPA5 3926 aa3.77□□□□□ -1.81
SPTA1-201ENST00000368147 INE1O15225 51 aa3.76□□□□□ -1.81
SPTA1-201ENST00000368147 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
SPTA1-201ENST00000368147 PDZD2O15018 2839 aa3.75□□□□□ -1.81
SPTA1-201ENST00000368147 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
SPTA1-201ENST00000368147 CUBNO60494 3623 aa3.73□□□□□ -1.81
SPTA1-201ENST00000368147 CSMD2Q7Z408 3487 aa3.71□□□□□ -1.81
SPTA1-201ENST00000368147 ZANQ9Y493 2812 aa3.7□□□□□ -1.82
SPTA1-201ENST00000368147 FBN2P35556 2912 aa3.69□□□□□ -1.82
SPTA1-201ENST00000368147 TENM2Q9NT68 2774 aa3.68□□□□□ -1.82
SPTA1-201ENST00000368147 KRTAP1-4P0C5Y4 121 aa3.68□□□□□ -1.82
SPTA1-201ENST00000368147 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
SPTA1-201ENST00000368147 H0YAA0 97 aa3.67□□□□□ -1.82
SPTA1-201ENST00000368147 MUC3AQ02505 3323 aa3.66□□□□□ -1.82
SPTA1-201ENST00000368147 AKAP9Q99996 3911 aa3.65□□□□□ -1.82
SPTA1-201ENST00000368147 HRNRQ86YZ3 2850 aaPredicted RBP3.64□□□□□ -1.83
SPTA1-201ENST00000368147 TGP01266 2768 aa3.62□□□□□ -1.83
SPTA1-201ENST00000368147 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
SPTA1-201ENST00000368147 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
SPTA1-201ENST00000368147 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
SPTA1-201ENST00000368147 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
SPTA1-201ENST00000368147 TRRAPQ9Y4A5 3859 aa3.58□□□□□ -1.84
SPTA1-201ENST00000368147 MXRA5Q9NR99 2828 aa3.57□□□□□ -1.84
SPTA1-201ENST00000368147 CSMD3Q7Z407 3707 aa3.56□□□□□ -1.84
SPTA1-201ENST00000368147 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
SPTA1-201ENST00000368147 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
SPTA1-201ENST00000368147 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
SPTA1-201ENST00000368147 MEGF8Q7Z7M0 2845 aa3.52□□□□□ -1.85
SPTA1-201ENST00000368147 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
SPTA1-201ENST00000368147 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
SPTA1-201ENST00000368147 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
SPTA1-201ENST00000368147 HUWE1Q7Z6Z7 4374 aaKnown RBP3.43□□□□□ -1.86
SPTA1-201ENST00000368147 FBN1P35555 2871 aaKnown RBP3.39□□□□□ -1.87
SPTA1-201ENST00000368147 FBN3Q75N90 2809 aa3.39□□□□□ -1.87
SPTA1-201ENST00000368147 KRTAP4-5Q9BYR2 181 aa3.38□□□□□ -1.87
SPTA1-201ENST00000368147 ALMS1Q8TCU4 4167 aa3.36□□□□□ -1.87
SPTA1-201ENST00000368147 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
SPTA1-201ENST00000368147 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
SPTA1-201ENST00000368147 FRAS1Q86XX4 4008 aa3.27□□□□□ -1.89
SPTA1-201ENST00000368147 CMYA5Q8N3K9 4069 aa3.26□□□□□ -1.89
SPTA1-201ENST00000368147 LORP23490 312 aaPredicted RBP3.26□□□□□ -1.89
SPTA1-201ENST00000368147 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
SPTA1-201ENST00000368147 OTOGQ6ZRI0 2925 aa3.24□□□□□ -1.89
SPTA1-201ENST00000368147 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms