RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 C14orf177Q52M58 125 aa11.85□□□□□ -0.51
TRIM58-201ENST00000366481 MRPL34Q9BQ48 92 aaKnown RBP11.84□□□□□ -0.51
TRIM58-201ENST00000366481 KMT2AQ03164 3969 aa11.84□□□□□ -0.51
TRIM58-201ENST00000366481 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
TRIM58-201ENST00000366481 LINC00313P59037 77 aa11.82□□□□□ -0.52
TRIM58-201ENST00000366481 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
TRIM58-201ENST00000366481 Q6ZR54 194 aa11.8□□□□□ -0.52
TRIM58-201ENST00000366481 A0A087X002 238 aa11.8□□□□□ -0.52
TRIM58-201ENST00000366481 NOTCH2NLQ7Z3S9 236 aa11.8□□□□□ -0.52
TRIM58-201ENST00000366481 LY6G6CO95867 125 aa11.78□□□□□ -0.52
TRIM58-201ENST00000366481 Q96NJ1 140 aa11.77□□□□□ -0.52
TRIM58-201ENST00000366481 RETNLBQ9BQ08 111 aa11.77□□□□□ -0.52
TRIM58-201ENST00000366481 Q6ZRN7 208 aaPredicted RBP11.77□□□□□ -0.53
TRIM58-201ENST00000366481 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
TRIM58-201ENST00000366481 ADM2Q7Z4H4 148 aa11.76□□□□□ -0.53
TRIM58-201ENST00000366481 ACYP2P14621 99 aa11.73□□□□□ -0.53
TRIM58-201ENST00000366481 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
TRIM58-201ENST00000366481 C8orf87E5RJ46 101 aa11.71□□□□□ -0.53
TRIM58-201ENST00000366481 A0A1B0GU69 56 aa11.71□□□□□ -0.54
TRIM58-201ENST00000366481 DNAH8Q96JB1 4490 aa11.7□□□□□ -0.54
TRIM58-201ENST00000366481 KRTAP13-1Q8IUC0 172 aa11.7□□□□□ -0.54
TRIM58-201ENST00000366481 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
TRIM58-201ENST00000366481 SPACA4Q8TDM5 124 aa11.69□□□□□ -0.54
TRIM58-201ENST00000366481 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
TRIM58-201ENST00000366481 Q5W150 140 aa11.69□□□□□ -0.54
TRIM58-201ENST00000366481 A0A087WTM6 91 aa11.68□□□□□ -0.54
TRIM58-201ENST00000366481 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
TRIM58-201ENST00000366481 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
TRIM58-201ENST00000366481 RTL8CO15255 209 aa11.66□□□□□ -0.54
TRIM58-201ENST00000366481 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
TRIM58-201ENST00000366481 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
TRIM58-201ENST00000366481 DNAH17Q9UFH2 4485 aa11.64□□□□□ -0.55
TRIM58-201ENST00000366481 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
TRIM58-201ENST00000366481 C4orf48Q5BLP8 95 aa11.6□□□□□ -0.55
TRIM58-201ENST00000366481 ZNF706Q9Y5V0 76 aaPredicted RBP11.59□□□□□ -0.55
TRIM58-201ENST00000366481 WWC2-AS2Q96NR7 200 aa11.58□□□□□ -0.56
TRIM58-201ENST00000366481 DNAH6Q9C0G6 4158 aa11.57□□□□□ -0.56
TRIM58-201ENST00000366481 LINC01554Q52M75 96 aa11.56□□□□□ -0.56
TRIM58-201ENST00000366481 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
TRIM58-201ENST00000366481 MIR22HGQ0VDD5 57 aa11.54□□□□□ -0.56
TRIM58-201ENST00000366481 ZNF861PO60384 105 aa11.5□□□□□ -0.57
TRIM58-201ENST00000366481 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
TRIM58-201ENST00000366481 UQCR11O14957 56 aa11.5□□□□□ -0.57
TRIM58-201ENST00000366481 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
TRIM58-201ENST00000366481 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
TRIM58-201ENST00000366481 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
TRIM58-201ENST00000366481 IGKV2D-30A0A075B6S6 120 aa11.45□□□□□ -0.58
TRIM58-201ENST00000366481 IGKV2-30P06310 120 aa11.45□□□□□ -0.58
TRIM58-201ENST00000366481 SPINK1P00995 79 aa11.45□□□□□ -0.58
TRIM58-201ENST00000366481 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
TRIM58-201ENST00000366481 CSAG1Q6PB30 78 aa11.42□□□□□ -0.58
TRIM58-201ENST00000366481 H3BS24 57 aa11.41□□□□□ -0.58
TRIM58-201ENST00000366481 SPATA8Q6RVD6 105 aa11.41□□□□□ -0.58
TRIM58-201ENST00000366481 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
TRIM58-201ENST00000366481 FAM229AH3BQW9 127 aa11.39□□□□□ -0.59
TRIM58-201ENST00000366481 IGLV7-43P04211 117 aa11.38□□□□□ -0.59
TRIM58-201ENST00000366481 LRP1BQ9NZR2 4599 aa11.36□□□□□ -0.59
TRIM58-201ENST00000366481 KRTAP13-3Q3SY46 172 aa11.35□□□□□ -0.59
TRIM58-201ENST00000366481 ALMS1Q8TCU4 4167 aa11.34□□□□□ -0.59
TRIM58-201ENST00000366481 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
TRIM58-201ENST00000366481 HYDINQ4G0P3 5121 aa11.27□□□□□ -0.6
TRIM58-201ENST00000366481 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
TRIM58-201ENST00000366481 Q8N1X5 172 aa11.19□□□□□ -0.62
TRIM58-201ENST00000366481 KRTAP13-2Q52LG2 175 aa11.18□□□□□ -0.62
TRIM58-201ENST00000366481 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
TRIM58-201ENST00000366481 SSBP3-AS1Q7Z2R9 100 aa11.16□□□□□ -0.62
TRIM58-201ENST00000366481 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
TRIM58-201ENST00000366481 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
TRIM58-201ENST00000366481 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
TRIM58-201ENST00000366481 PKHD1P08F94 4074 aa11.06□□□□□ -0.64
TRIM58-201ENST00000366481 PKD1P98161 4303 aa11.02□□□□□ -0.64
TRIM58-201ENST00000366481 CRIPTQ9P021 101 aa11□□□□□ -0.65
TRIM58-201ENST00000366481 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
TRIM58-201ENST00000366481 KRTAP16-1A8MUX0 517 aa10.94□□□□□ -0.66
TRIM58-201ENST00000366481 FAT1Q14517 4588 aa10.94□□□□□ -0.66
TRIM58-201ENST00000366481 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
TRIM58-201ENST00000366481 DMBT1Q9UGM3 2413 aaPredicted RBP10.91□□□□□ -0.66
TRIM58-201ENST00000366481 Q6ZSA8 131 aa10.91□□□□□ -0.66
TRIM58-201ENST00000366481 A0A1B0GU33 70 aa10.88□□□□□ -0.67
TRIM58-201ENST00000366481 H0YAA0 97 aa10.88□□□□□ -0.67
TRIM58-201ENST00000366481 KRTAP25-1Q3LHN0 102 aa10.88□□□□□ -0.67
TRIM58-201ENST00000366481 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
TRIM58-201ENST00000366481 A8MUU9 505 aa10.84□□□□□ -0.67
TRIM58-201ENST00000366481 K7ERS5 55 aa10.82□□□□□ -0.68
TRIM58-201ENST00000366481 C9orf92A6NGG3 77 aa10.81□□□□□ -0.68
TRIM58-201ENST00000366481 ROMO1P60602 79 aa10.8□□□□□ -0.68
TRIM58-201ENST00000366481 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.69
TRIM58-201ENST00000366481 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.69
TRIM58-201ENST00000366481 DYNC1H1Q14204 4646 aaKnown RBP10.76□□□□□ -0.69
TRIM58-201ENST00000366481 H1FX-AS1Q4G0G2 97 aa10.71□□□□□ -0.69
TRIM58-201ENST00000366481 SPINT4Q6UDR6 99 aa10.59□□□□□ -0.71
TRIM58-201ENST00000366481 A0A0D9SG42 100 aa10.56□□□□□ -0.72
TRIM58-201ENST00000366481 COX6B2Q6YFQ2 88 aa10.52□□□□□ -0.73
TRIM58-201ENST00000366481 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
TRIM58-201ENST00000366481 LRP1Q07954 4544 aaKnown RBP10.51□□□□□ -0.73
TRIM58-201ENST00000366481 MYCBP2O75592 4640 aa10.51□□□□□ -0.73
TRIM58-201ENST00000366481 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
TRIM58-201ENST00000366481 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
TRIM58-201ENST00000366481 P0C880 135 aa10.46□□□□□ -0.74
TRIM58-201ENST00000366481 RYR2Q92736 4967 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms