RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
CTNND1-204ENST00000361796 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
CTNND1-204ENST00000361796 LRBAP50851 2863 aa4.4□□□□□ -1.7
CTNND1-204ENST00000361796 BOD1L1Q8NFC6 3051 aa4.38□□□□□ -1.71
CTNND1-204ENST00000361796 COL6A5A8TX70 2615 aa4.38□□□□□ -1.71
CTNND1-204ENST00000361796 SETXQ7Z333 2677 aaKnown RBP4.37□□□□□ -1.71
CTNND1-204ENST00000361796 TNP1P09430 55 aa4.37□□□□□ -1.71
CTNND1-204ENST00000361796 ZFHX4Q86UP3 3567 aa4.36□□□□□ -1.71
CTNND1-204ENST00000361796 ZNF292O60281 2723 aa4.35□□□□□ -1.71
CTNND1-204ENST00000361796 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
CTNND1-204ENST00000361796 DMXL2Q8TDJ6 3036 aa4.35□□□□□ -1.71
CTNND1-204ENST00000361796 FRYLO94915 3013 aa4.33□□□□□ -1.72
CTNND1-204ENST00000361796 ATMQ13315 3056 aa4.33□□□□□ -1.72
CTNND1-204ENST00000361796 CRYBG3Q68DQ2 2970 aa4.33□□□□□ -1.72
CTNND1-204ENST00000361796 IGSF10Q6WRI0 2623 aa4.32□□□□□ -1.72
CTNND1-204ENST00000361796 ASH1LQ9NR48 2969 aaKnown RBP4.31□□□□□ -1.72
CTNND1-204ENST00000361796 TACC2O95359 2948 aa4.31□□□□□ -1.72
CTNND1-204ENST00000361796 STAB2Q8WWQ8 2551 aa4.3□□□□□ -1.72
CTNND1-204ENST00000361796 ADGRG4Q8IZF6 3080 aa4.3□□□□□ -1.72
CTNND1-204ENST00000361796 BAHCC1Q9P281 2608 aa4.3□□□□□ -1.72
CTNND1-204ENST00000361796 NBEAQ8NFP9 2946 aa4.3□□□□□ -1.72
CTNND1-204ENST00000361796 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
CTNND1-204ENST00000361796 ITPR2Q14571 2701 aa4.29□□□□□ -1.72
CTNND1-204ENST00000361796 UBR5O95071 2799 aaPredicted RBP4.29□□□□□ -1.72
CTNND1-204ENST00000361796 LAMA5O15230 3695 aa4.29□□□□□ -1.72
CTNND1-204ENST00000361796 KRTAP21-3Q3LHN1 58 aa4.29□□□□□ -1.72
CTNND1-204ENST00000361796 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
CTNND1-204ENST00000361796 XP32Q5T750 250 aa4.28□□□□□ -1.72
CTNND1-204ENST00000361796 APCP25054 2843 aa4.28□□□□□ -1.72
CTNND1-204ENST00000361796 H0YAA0 97 aa4.27□□□□□ -1.73
CTNND1-204ENST00000361796 UTP20O75691 2785 aaKnown RBP4.26□□□□□ -1.73
CTNND1-204ENST00000361796 HIVEP1P15822 2718 aa4.26□□□□□ -1.73
CTNND1-204ENST00000361796 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
CTNND1-204ENST00000361796 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
CTNND1-204ENST00000361796 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
CTNND1-204ENST00000361796 MUC3AQ02505 3323 aa4.25□□□□□ -1.73
CTNND1-204ENST00000361796 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
CTNND1-204ENST00000361796 ZZEF1O43149 2961 aa4.22□□□□□ -1.73
CTNND1-204ENST00000361796 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
CTNND1-204ENST00000361796 SPENQ96T58 3664 aaKnown RBP4.14□□□□□ -1.75
CTNND1-204ENST00000361796 LOC400499M0QZD8 3231 aa4.12□□□□□ -1.75
CTNND1-204ENST00000361796 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
CTNND1-204ENST00000361796 CELSR2Q9HCU4 2923 aa4.11□□□□□ -1.75
CTNND1-204ENST00000361796 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
CTNND1-204ENST00000361796 DMXL1Q9Y485 3027 aa4.1□□□□□ -1.75
CTNND1-204ENST00000361796 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
CTNND1-204ENST00000361796 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.76
CTNND1-204ENST00000361796 RELNP78509 3460 aa4.08□□□□□ -1.76
CTNND1-204ENST00000361796 FLNCQ14315 2725 aa4.08□□□□□ -1.76
CTNND1-204ENST00000361796 NBPF19A0A087WUL8 3843 aa4.06□□□□□ -1.76
CTNND1-204ENST00000361796 SMG1Q96Q15 3661 aaKnown RBP4.06□□□□□ -1.76
CTNND1-204ENST00000361796 DCHS2Q6V1P9 2916 aa4.06□□□□□ -1.76
CTNND1-204ENST00000361796 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
CTNND1-204ENST00000361796 ZFHX3Q15911 3703 aa4.05□□□□□ -1.76
CTNND1-204ENST00000361796 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
CTNND1-204ENST00000361796 HRNRQ86YZ3 2850 aaPredicted RBP4.03□□□□□ -1.76
CTNND1-204ENST00000361796 SVEP1Q4LDE5 3571 aa4.02□□□□□ -1.77
CTNND1-204ENST00000361796 TENM4Q6N022 2769 aa4.01□□□□□ -1.77
CTNND1-204ENST00000361796 CSMD2Q7Z408 3487 aa4□□□□□ -1.77
CTNND1-204ENST00000361796 ZANQ9Y493 2812 aa3.99□□□□□ -1.77
CTNND1-204ENST00000361796 FBN2P35556 2912 aa3.98□□□□□ -1.77
CTNND1-204ENST00000361796 CELSR1Q9NYQ6 3014 aa3.97□□□□□ -1.77
CTNND1-204ENST00000361796 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
CTNND1-204ENST00000361796 BSNQ9UPA5 3926 aa3.96□□□□□ -1.78
CTNND1-204ENST00000361796 NIPBLQ6KC79 2804 aaeCLIP3.95□□□□□ -1.781e-6■□□□□ 9
CTNND1-204ENST00000361796 TENM2Q9NT68 2774 aa3.94□□□□□ -1.78
CTNND1-204ENST00000361796 NF1P21359 2839 aa3.93□□□□□ -1.78
CTNND1-204ENST00000361796 TGP01266 2768 aa3.93□□□□□ -1.78
CTNND1-204ENST00000361796 KRTAP12-1P59990 96 aa3.9□□□□□ -1.78
CTNND1-204ENST00000361796 TENM1Q9UKZ4 2725 aa3.89□□□□□ -1.79
CTNND1-204ENST00000361796 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
CTNND1-204ENST00000361796 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
CTNND1-204ENST00000361796 CUBNO60494 3623 aa3.84□□□□□ -1.79
CTNND1-204ENST00000361796 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
CTNND1-204ENST00000361796 MXRA5Q9NR99 2828 aa3.82□□□□□ -1.8
CTNND1-204ENST00000361796 ANK3Q12955 4377 aaKnown RBP3.8□□□□□ -1.8
CTNND1-204ENST00000361796 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
CTNND1-204ENST00000361796 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
CTNND1-204ENST00000361796 VWFP04275 2813 aa3.78□□□□□ -1.8
CTNND1-204ENST00000361796 PKD1L1Q8TDX9 2849 aa3.77□□□□□ -1.81
CTNND1-204ENST00000361796 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
CTNND1-204ENST00000361796 INE1O15225 51 aa3.71□□□□□ -1.82
CTNND1-204ENST00000361796 PDZD2O15018 2839 aa3.69□□□□□ -1.82
CTNND1-204ENST00000361796 TRRAPQ9Y4A5 3859 aa3.66□□□□□ -1.82
CTNND1-204ENST00000361796 HUWE1Q7Z6Z7 4374 aaKnown RBP3.65□□□□□ -1.82
CTNND1-204ENST00000361796 AKAP9Q99996 3911 aa3.65□□□□□ -1.83
CTNND1-204ENST00000361796 ZNF469Q96JG9 3925 aaPredicted RBP3.63□□□□□ -1.83
CTNND1-204ENST00000361796 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
CTNND1-204ENST00000361796 KRTAP3-3Q9BYR6 98 aa3.6□□□□□ -1.83
CTNND1-204ENST00000361796 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
CTNND1-204ENST00000361796 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
CTNND1-204ENST00000361796 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
CTNND1-204ENST00000361796 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
CTNND1-204ENST00000361796 CSMD3Q7Z407 3707 aa3.58□□□□□ -1.84
CTNND1-204ENST00000361796 FBN3Q75N90 2809 aa3.56□□□□□ -1.84
CTNND1-204ENST00000361796 MEGF8Q7Z7M0 2845 aa3.55□□□□□ -1.84
CTNND1-204ENST00000361796 OTOGQ6ZRI0 2925 aa3.55□□□□□ -1.84
CTNND1-204ENST00000361796 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
CTNND1-204ENST00000361796 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
CTNND1-204ENST00000361796 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms