RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 A0A087X002 238 aa8.28□□□□□ -1.08
SGMS1-202ENST00000361781 NOTCH2NLQ7Z3S9 236 aa8.28□□□□□ -1.08
SGMS1-202ENST00000361781 LCE6AA0A183 80 aa8.26□□□□□ -1.09
SGMS1-202ENST00000361781 Q75L30 129 aa8.25□□□□□ -1.09
SGMS1-202ENST00000361781 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
SGMS1-202ENST00000361781 SPRR1BP22528 89 aa8.25□□□□□ -1.09
SGMS1-202ENST00000361781 LCA10Q71F78 164 aa8.25□□□□□ -1.09
SGMS1-202ENST00000361781 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
SGMS1-202ENST00000361781 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
SGMS1-202ENST00000361781 Q96NJ1 140 aa8.24□□□□□ -1.09
SGMS1-202ENST00000361781 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
SGMS1-202ENST00000361781 ANK2Q01484 3957 aa8.23□□□□□ -1.09
SGMS1-202ENST00000361781 IGLV7-43P04211 117 aa8.21□□□□□ -1.09
SGMS1-202ENST00000361781 Q8N1X5 172 aa8.19□□□□□ -1.1
SGMS1-202ENST00000361781 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
SGMS1-202ENST00000361781 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
SGMS1-202ENST00000361781 MIR22HGQ0VDD5 57 aa8.18□□□□□ -1.1
SGMS1-202ENST00000361781 UQCR11O14957 56 aa8.17□□□□□ -1.1
SGMS1-202ENST00000361781 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
SGMS1-202ENST00000361781 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
SGMS1-202ENST00000361781 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
SGMS1-202ENST00000361781 Q5W150 140 aa8.16□□□□□ -1.1
SGMS1-202ENST00000361781 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
SGMS1-202ENST00000361781 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
SGMS1-202ENST00000361781 K7ERS5 55 aa8.1□□□□□ -1.11
SGMS1-202ENST00000361781 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
SGMS1-202ENST00000361781 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
SGMS1-202ENST00000361781 Q6ZR54 194 aa8.07□□□□□ -1.12
SGMS1-202ENST00000361781 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
SGMS1-202ENST00000361781 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
SGMS1-202ENST00000361781 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
SGMS1-202ENST00000361781 LYSTQ99698 3801 aa7.99□□□□□ -1.13
SGMS1-202ENST00000361781 LINC00483Q53H64 154 aa7.99□□□□□ -1.13
SGMS1-202ENST00000361781 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
SGMS1-202ENST00000361781 A6NN06 94 aa7.97□□□□□ -1.13
SGMS1-202ENST00000361781 KRTAP10-2P60368 255 aa7.96□□□□□ -1.13
SGMS1-202ENST00000361781 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
SGMS1-202ENST00000361781 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
SGMS1-202ENST00000361781 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
SGMS1-202ENST00000361781 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
SGMS1-202ENST00000361781 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
SGMS1-202ENST00000361781 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
SGMS1-202ENST00000361781 A0A0D9SG42 100 aa7.86□□□□□ -1.15
SGMS1-202ENST00000361781 KRTAP10-1P60331 282 aa7.86□□□□□ -1.15
SGMS1-202ENST00000361781 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
SGMS1-202ENST00000361781 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
SGMS1-202ENST00000361781 A0A1B0GU33 70 aa7.8□□□□□ -1.16
SGMS1-202ENST00000361781 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
SGMS1-202ENST00000361781 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
SGMS1-202ENST00000361781 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
SGMS1-202ENST00000361781 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
SGMS1-202ENST00000361781 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
SGMS1-202ENST00000361781 H3BS24 57 aa7.72□□□□□ -1.17
SGMS1-202ENST00000361781 DNAH7Q8WXX0 4024 aa7.65□□□□□ -1.18
SGMS1-202ENST00000361781 PRKDCP78527 4128 aaKnown RBP7.64□□□□□ -1.19
SGMS1-202ENST00000361781 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
SGMS1-202ENST00000361781 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
SGMS1-202ENST00000361781 KRTAP13-3Q3SY46 172 aa7.56□□□□□ -1.2
SGMS1-202ENST00000361781 FRAS1Q86XX4 4008 aa7.56□□□□□ -1.2
SGMS1-202ENST00000361781 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SGMS1-202ENST00000361781 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
SGMS1-202ENST00000361781 Q6ZSA8 131 aa7.5□□□□□ -1.21
SGMS1-202ENST00000361781 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
SGMS1-202ENST00000361781 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
SGMS1-202ENST00000361781 KRTAP16-1A8MUX0 517 aa7.49□□□□□ -1.21
SGMS1-202ENST00000361781 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
SGMS1-202ENST00000361781 H0YAA0 97 aa7.43□□□□□ -1.22
SGMS1-202ENST00000361781 COX6B2Q6YFQ2 88 aa7.43□□□□□ -1.22
SGMS1-202ENST00000361781 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SGMS1-202ENST00000361781 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SGMS1-202ENST00000361781 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
SGMS1-202ENST00000361781 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
SGMS1-202ENST00000361781 ROMO1P60602 79 aa7.38□□□□□ -1.23
SGMS1-202ENST00000361781 S4R3F8 94 aa7.38□□□□□ -1.23
SGMS1-202ENST00000361781 DNAH8Q96JB1 4490 aa7.34□□□□□ -1.23
SGMS1-202ENST00000361781 A8MUU9 505 aa7.32□□□□□ -1.24
SGMS1-202ENST00000361781 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
SGMS1-202ENST00000361781 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
SGMS1-202ENST00000361781 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
SGMS1-202ENST00000361781 DNAH11Q96DT5 4516 aa7.26□□□□□ -1.25
SGMS1-202ENST00000361781 HYDINQ4G0P3 5121 aa7.24□□□□□ -1.25
SGMS1-202ENST00000361781 Q5VSD8 79 aa7.24□□□□□ -1.25
SGMS1-202ENST00000361781 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
SGMS1-202ENST00000361781 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
SGMS1-202ENST00000361781 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.25
SGMS1-202ENST00000361781 DNAH2Q9P225 4427 aa7.19□□□□□ -1.26
SGMS1-202ENST00000361781 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
SGMS1-202ENST00000361781 R4GN34 69 aa7.16□□□□□ -1.26
SGMS1-202ENST00000361781 NDUFAF8A1L188 74 aa7.15□□□□□ -1.26
SGMS1-202ENST00000361781 LRP1BQ9NZR2 4599 aa7.14□□□□□ -1.27
SGMS1-202ENST00000361781 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
SGMS1-202ENST00000361781 M0QZ58 72 aa7.14□□□□□ -1.27
SGMS1-202ENST00000361781 P0C880 135 aa7.12□□□□□ -1.27
SGMS1-202ENST00000361781 PKHD1P08F94 4074 aa7.11□□□□□ -1.27
SGMS1-202ENST00000361781 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
SGMS1-202ENST00000361781 J3QL48 77 aa7.07□□□□□ -1.28
SGMS1-202ENST00000361781 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
SGMS1-202ENST00000361781 XP32Q5T750 250 aa7.02□□□□□ -1.29
SGMS1-202ENST00000361781 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
SGMS1-202ENST00000361781 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms