RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
CTR9-201ENST00000361367 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
CTR9-201ENST00000361367 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
CTR9-201ENST00000361367 ZFHX4Q86UP3 3567 aa8.06□□□□□ -1.12
CTR9-201ENST00000361367 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
CTR9-201ENST00000361367 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
CTR9-201ENST00000361367 M0R2T5 61 aa8.05□□□□□ -1.12
CTR9-201ENST00000361367 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
CTR9-201ENST00000361367 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
CTR9-201ENST00000361367 OXTP01178 125 aa8□□□□□ -1.13
CTR9-201ENST00000361367 A0A0D9SG42 100 aa7.99□□□□□ -1.13
CTR9-201ENST00000361367 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
CTR9-201ENST00000361367 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
CTR9-201ENST00000361367 KRTAP29-1A8MX34 341 aaPredicted RBP7.97□□□□□ -1.13
CTR9-201ENST00000361367 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
CTR9-201ENST00000361367 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
CTR9-201ENST00000361367 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.13
CTR9-201ENST00000361367 VWFP04275 2813 aa7.96□□□□□ -1.14
CTR9-201ENST00000361367 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.14
CTR9-201ENST00000361367 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.14
CTR9-201ENST00000361367 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
CTR9-201ENST00000361367 ZFHX3Q15911 3703 aa7.95□□□□□ -1.14
CTR9-201ENST00000361367 S4R3F8 94 aa7.94□□□□□ -1.14
CTR9-201ENST00000361367 TGP01266 2768 aa7.91□□□□□ -1.14
CTR9-201ENST00000361367 A0A1B0GU33 70 aa7.9□□□□□ -1.15
CTR9-201ENST00000361367 Q1T7F1 81 aa7.89□□□□□ -1.15
CTR9-201ENST00000361367 Q5XG85 94 aa7.89□□□□□ -1.15
CTR9-201ENST00000361367 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
CTR9-201ENST00000361367 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
CTR9-201ENST00000361367 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
CTR9-201ENST00000361367 DMAC1Q96GE9 116 aa7.82□□□□□ -1.16
CTR9-201ENST00000361367 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
CTR9-201ENST00000361367 Q75L30 129 aa7.76□□□□□ -1.17
CTR9-201ENST00000361367 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
CTR9-201ENST00000361367 R4GN34 69 aa7.76□□□□□ -1.17
CTR9-201ENST00000361367 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
CTR9-201ENST00000361367 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
CTR9-201ENST00000361367 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
CTR9-201ENST00000361367 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
CTR9-201ENST00000361367 SPENQ96T58 3664 aaKnown RBP7.66□□□□□ -1.18
CTR9-201ENST00000361367 Q5VV11 94 aa7.65□□□□□ -1.18
CTR9-201ENST00000361367 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
CTR9-201ENST00000361367 SVEP1Q4LDE5 3571 aa7.63□□□□□ -1.19
CTR9-201ENST00000361367 H3BS24 57 aa7.62□□□□□ -1.19
CTR9-201ENST00000361367 M0QZ58 72 aa7.62□□□□□ -1.19
CTR9-201ENST00000361367 LCA10Q71F78 164 aa7.61□□□□□ -1.19
CTR9-201ENST00000361367 A8MUU9 505 aa7.61□□□□□ -1.19
CTR9-201ENST00000361367 ANK3Q12955 4377 aaKnown RBP7.6□□□□□ -1.19
CTR9-201ENST00000361367 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.19
CTR9-201ENST00000361367 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.19
CTR9-201ENST00000361367 A0A1B0GVY2 172 aa7.59□□□□□ -1.2
CTR9-201ENST00000361367 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
CTR9-201ENST00000361367 BSNQ9UPA5 3926 aa7.54□□□□□ -1.2
CTR9-201ENST00000361367 XP32Q5T750 250 aa7.51□□□□□ -1.21
CTR9-201ENST00000361367 CUBNO60494 3623 aa7.5□□□□□ -1.21
CTR9-201ENST00000361367 TRRAPQ9Y4A5 3859 aa7.5□□□□□ -1.21
CTR9-201ENST00000361367 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
CTR9-201ENST00000361367 FBN3Q75N90 2809 aa7.49□□□□□ -1.21
CTR9-201ENST00000361367 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
CTR9-201ENST00000361367 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
CTR9-201ENST00000361367 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
CTR9-201ENST00000361367 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
CTR9-201ENST00000361367 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
CTR9-201ENST00000361367 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
CTR9-201ENST00000361367 ROMO1P60602 79 aa7.33□□□□□ -1.24
CTR9-201ENST00000361367 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
CTR9-201ENST00000361367 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
CTR9-201ENST00000361367 A8MU10 97 aa7.29□□□□□ -1.24
CTR9-201ENST00000361367 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
CTR9-201ENST00000361367 A6NN06 94 aa7.08□□□□□ -1.28
CTR9-201ENST00000361367 ZNF469Q96JG9 3925 aaPredicted RBP7.05□□□□□ -1.28
CTR9-201ENST00000361367 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
CTR9-201ENST00000361367 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
CTR9-201ENST00000361367 HUWE1Q7Z6Z7 4374 aaKnown RBP7.01□□□□□ -1.29
CTR9-201ENST00000361367 TNP1P09430 55 aa6.97□□□□□ -1.29
CTR9-201ENST00000361367 P0C880 135 aa6.95□□□□□ -1.3
CTR9-201ENST00000361367 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
CTR9-201ENST00000361367 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
CTR9-201ENST00000361367 H0YAA0 97 aa6.91□□□□□ -1.3
CTR9-201ENST00000361367 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
CTR9-201ENST00000361367 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
CTR9-201ENST00000361367 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
CTR9-201ENST00000361367 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
CTR9-201ENST00000361367 DNAH9Q9NYC9 4486 aa6.81□□□□□ -1.32
CTR9-201ENST00000361367 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
CTR9-201ENST00000361367 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
CTR9-201ENST00000361367 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
CTR9-201ENST00000361367 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
CTR9-201ENST00000361367 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
CTR9-201ENST00000361367 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
CTR9-201ENST00000361367 ALMS1Q8TCU4 4167 aa6.66□□□□□ -1.34
CTR9-201ENST00000361367 CSMD3Q7Z407 3707 aa6.64□□□□□ -1.35
CTR9-201ENST00000361367 DNAH5Q8TE73 4624 aa6.62□□□□□ -1.35
CTR9-201ENST00000361367 PLECQ15149 4684 aaKnown RBP6.6□□□□□ -1.35
CTR9-201ENST00000361367 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
CTR9-201ENST00000361367 DNAH1Q9P2D7 4330 aa6.51□□□□□ -1.37
CTR9-201ENST00000361367 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
CTR9-201ENST00000361367 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
CTR9-201ENST00000361367 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
CTR9-201ENST00000361367 VPS13DQ5THJ4 4388 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms