RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 H3BPC8 53 aa9.8□□□□□ -0.84
IFT140-201ENST00000361339 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
IFT140-201ENST00000361339 KRTAP13-1Q8IUC0 172 aa9.79□□□□□ -0.84
IFT140-201ENST00000361339 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
IFT140-201ENST00000361339 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.85
IFT140-201ENST00000361339 SPRR1BP22528 89 aa9.76□□□□□ -0.85
IFT140-201ENST00000361339 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
IFT140-201ENST00000361339 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
IFT140-201ENST00000361339 RTL8CO15255 209 aa9.75□□□□□ -0.85
IFT140-201ENST00000361339 HRES1P13985 223 aa9.73□□□□□ -0.85
IFT140-201ENST00000361339 C7orf65Q6ZTY9 151 aa9.73□□□□□ -0.85
IFT140-201ENST00000361339 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
IFT140-201ENST00000361339 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
IFT140-201ENST00000361339 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.86
IFT140-201ENST00000361339 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
IFT140-201ENST00000361339 ADM2Q7Z4H4 148 aa9.69□□□□□ -0.86
IFT140-201ENST00000361339 Q6ZR54 194 aa9.68□□□□□ -0.86
IFT140-201ENST00000361339 DNAH5Q8TE73 4624 aa9.68□□□□□ -0.86
IFT140-201ENST00000361339 A0A087X002 238 aa9.67□□□□□ -0.86
IFT140-201ENST00000361339 NOTCH2NLQ7Z3S9 236 aa9.67□□□□□ -0.86
IFT140-201ENST00000361339 ALMS1Q8TCU4 4167 aa9.66□□□□□ -0.86
IFT140-201ENST00000361339 C8orf17Q9NRJ1 99 aa9.66□□□□□ -0.86
IFT140-201ENST00000361339 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.87
IFT140-201ENST00000361339 LY6G6CO95867 125 aa9.64□□□□□ -0.87
IFT140-201ENST00000361339 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
IFT140-201ENST00000361339 LINC00313P59037 77 aa9.63□□□□□ -0.87
IFT140-201ENST00000361339 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
IFT140-201ENST00000361339 Q96NJ1 140 aa9.63□□□□□ -0.87
IFT140-201ENST00000361339 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
IFT140-201ENST00000361339 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
IFT140-201ENST00000361339 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
IFT140-201ENST00000361339 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
IFT140-201ENST00000361339 PLAC8Q9NZF1 115 aa9.59□□□□□ -0.87
IFT140-201ENST00000361339 LRP1BQ9NZR2 4599 aa9.58□□□□□ -0.88
IFT140-201ENST00000361339 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
IFT140-201ENST00000361339 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
IFT140-201ENST00000361339 ZNF861PO60384 105 aa9.56□□□□□ -0.88
IFT140-201ENST00000361339 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
IFT140-201ENST00000361339 MRPL34Q9BQ48 92 aaKnown RBP9.55□□□□□ -0.88
IFT140-201ENST00000361339 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
IFT140-201ENST00000361339 Q5W150 140 aa9.54□□□□□ -0.88
IFT140-201ENST00000361339 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
IFT140-201ENST00000361339 PKD1P98161 4303 aa9.5□□□□□ -0.89
IFT140-201ENST00000361339 CIRBP-AS1Q8TBR5 109 aa9.5□□□□□ -0.89
IFT140-201ENST00000361339 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
IFT140-201ENST00000361339 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
IFT140-201ENST00000361339 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
IFT140-201ENST00000361339 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
IFT140-201ENST00000361339 A0A1B0GU69 56 aa9.43□□□□□ -0.9
IFT140-201ENST00000361339 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
IFT140-201ENST00000361339 ACYP2P14621 99 aa9.42□□□□□ -0.9
IFT140-201ENST00000361339 PKHD1P08F94 4074 aa9.42□□□□□ -0.9
IFT140-201ENST00000361339 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
IFT140-201ENST00000361339 LINC01554Q52M75 96 aa9.37□□□□□ -0.91
IFT140-201ENST00000361339 KRTAP13-2Q52LG2 175 aa9.34□□□□□ -0.91
IFT140-201ENST00000361339 H3BS24 57 aa9.32□□□□□ -0.92
IFT140-201ENST00000361339 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
IFT140-201ENST00000361339 PLA2G1BP04054 148 aaKnown RBP9.31□□□□□ -0.92
IFT140-201ENST00000361339 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
IFT140-201ENST00000361339 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
IFT140-201ENST00000361339 SPINK1P00995 79 aa9.29□□□□□ -0.92
IFT140-201ENST00000361339 Q6ZSA8 131 aa9.26□□□□□ -0.93
IFT140-201ENST00000361339 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
IFT140-201ENST00000361339 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
IFT140-201ENST00000361339 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
IFT140-201ENST00000361339 UQCR11O14957 56 aa9.25□□□□□ -0.93
IFT140-201ENST00000361339 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
IFT140-201ENST00000361339 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
IFT140-201ENST00000361339 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
IFT140-201ENST00000361339 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
IFT140-201ENST00000361339 FLG2Q5D862 2391 aaPredicted RBP9.2□□□□□ -0.94
IFT140-201ENST00000361339 FAT1Q14517 4588 aa9.2□□□□□ -0.94
IFT140-201ENST00000361339 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
IFT140-201ENST00000361339 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
IFT140-201ENST00000361339 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
IFT140-201ENST00000361339 Q8N1X5 172 aa9.1□□□□□ -0.95
IFT140-201ENST00000361339 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
IFT140-201ENST00000361339 KMT2CQ8NEZ4 4911 aaKnown RBP9.06□□□□□ -0.96
IFT140-201ENST00000361339 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
IFT140-201ENST00000361339 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
IFT140-201ENST00000361339 APOBP04114 4563 aaKnown RBP9.04□□□□□ -0.96
IFT140-201ENST00000361339 RYR2Q92736 4967 aa8.99□□□□□ -0.97
IFT140-201ENST00000361339 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
IFT140-201ENST00000361339 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
IFT140-201ENST00000361339 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
IFT140-201ENST00000361339 H0YAA0 97 aa8.88□□□□□ -0.99
IFT140-201ENST00000361339 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
IFT140-201ENST00000361339 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
IFT140-201ENST00000361339 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
IFT140-201ENST00000361339 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
IFT140-201ENST00000361339 KRTAP21-3Q3LHN1 58 aa8.83□□□□□ -1
IFT140-201ENST00000361339 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
IFT140-201ENST00000361339 A8MUU9 505 aa8.81□□□□□ -1
IFT140-201ENST00000361339 ROMO1P60602 79 aa8.78□□□□□ -1
IFT140-201ENST00000361339 A0A1B0GU33 70 aa8.77□□□□□ -1.01
IFT140-201ENST00000361339 RYR3Q15413 4870 aa8.76□□□□□ -1.01
IFT140-201ENST00000361339 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
IFT140-201ENST00000361339 HSPG2P98160 4391 aa8.7□□□□□ -1.02
IFT140-201ENST00000361339 TNXBP22105 4242 aa8.68□□□□□ -1.02
IFT140-201ENST00000361339 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms