RNA–Protein interactions for RNA: ENST00000359540.7

BCR-202, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 1 (best) BASIC

Gene BCR, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-202ENST00000359540 LINC01558Q9Y6Z2 57 aa11.84□□□□□ -0.51
BCR-202ENST00000359540 ZCCHC13Q8WW36 166 aaKnown RBP11.82□□□□□ -0.52
BCR-202ENST00000359540 LCE6AA0A183 80 aa11.81□□□□□ -0.52
BCR-202ENST00000359540 LINC01554Q52M75 96 aa11.79□□□□□ -0.52
BCR-202ENST00000359540 Q5W150 140 aa11.79□□□□□ -0.52
BCR-202ENST00000359540 SPENQ96T58 3664 aaKnown RBP11.79□□□□□ -0.52
BCR-202ENST00000359540 TENM1Q9UKZ4 2725 aa11.74□□□□□ -0.53
BCR-202ENST00000359540 SPINK7P58062 85 aa11.74□□□□□ -0.53
BCR-202ENST00000359540 TENM3Q9P273 2699 aa11.74□□□□□ -0.53
BCR-202ENST00000359540 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
BCR-202ENST00000359540 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
BCR-202ENST00000359540 A0A087X002 238 aa11.71□□□□□ -0.54
BCR-202ENST00000359540 KRTAP21-3Q3LHN1 58 aa11.71□□□□□ -0.54
BCR-202ENST00000359540 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.54
BCR-202ENST00000359540 KRTAP10-1P60331 282 aa11.67□□□□□ -0.54
BCR-202ENST00000359540 RBM12B-AS1Q9P1G2 102 aa11.66□□□□□ -0.54
BCR-202ENST00000359540 Q6ZR54 194 aa11.65□□□□□ -0.54
BCR-202ENST00000359540 VWFP04275 2813 aa11.65□□□□□ -0.54
BCR-202ENST00000359540 Q6ZRN7 208 aaPredicted RBP11.62□□□□□ -0.55
BCR-202ENST00000359540 NBPF19A0A087WUL8 3843 aa11.61□□□□□ -0.55
BCR-202ENST00000359540 PDZD2O15018 2839 aa11.6□□□□□ -0.55
BCR-202ENST00000359540 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
BCR-202ENST00000359540 CSMD2Q7Z408 3487 aa11.58□□□□□ -0.55
BCR-202ENST00000359540 PRAC1Q96KF2 57 aa11.58□□□□□ -0.55
BCR-202ENST00000359540 FBN1P35555 2871 aaKnown RBP11.58□□□□□ -0.56
BCR-202ENST00000359540 A0A1B0GU33 70 aa11.58□□□□□ -0.56
BCR-202ENST00000359540 BSNQ9UPA5 3926 aa11.55□□□□□ -0.56
BCR-202ENST00000359540 LUZP6Q538Z0 58 aa11.54□□□□□ -0.56
BCR-202ENST00000359540 DMAC1Q96GE9 116 aa11.52□□□□□ -0.56
BCR-202ENST00000359540 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
BCR-202ENST00000359540 Q5VSD8 79 aa11.47□□□□□ -0.57
BCR-202ENST00000359540 ZFHX3Q15911 3703 aa11.46□□□□□ -0.58
BCR-202ENST00000359540 A8MU10 97 aa11.39□□□□□ -0.59
BCR-202ENST00000359540 CAMK2N1Q7Z7J9 78 aa11.38□□□□□ -0.59
BCR-202ENST00000359540 Q6ZSA8 131 aa11.38□□□□□ -0.59
BCR-202ENST00000359540 H3BS24 57 aa11.37□□□□□ -0.59
BCR-202ENST00000359540 CSAG1Q6PB30 78 aa11.36□□□□□ -0.59
BCR-202ENST00000359540 PKD1L1Q8TDX9 2849 aa11.33□□□□□ -0.6
BCR-202ENST00000359540 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
BCR-202ENST00000359540 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
BCR-202ENST00000359540 TGP01266 2768 aa11.22□□□□□ -0.61
BCR-202ENST00000359540 M0R2T5 61 aa11.18□□□□□ -0.62
BCR-202ENST00000359540 S4R3F8 94 aa11.17□□□□□ -0.62
BCR-202ENST00000359540 SPATA8Q6RVD6 105 aa11.14□□□□□ -0.63
BCR-202ENST00000359540 A6NN06 94 aa11.13□□□□□ -0.63
BCR-202ENST00000359540 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
BCR-202ENST00000359540 H1FX-AS1Q4G0G2 97 aa11.11□□□□□ -0.63
BCR-202ENST00000359540 SEC61BP60468 96 aaKnown RBP11.11□□□□□ -0.63
BCR-202ENST00000359540 R4GN34 69 aa11.07□□□□□ -0.64
BCR-202ENST00000359540 RPL37P61927 97 aaKnown RBP11.07□□□□□ -0.64
BCR-202ENST00000359540 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
BCR-202ENST00000359540 VPS13CQ709C8 3753 aa11.04□□□□□ -0.64
BCR-202ENST00000359540 A0A0A0MQY5 61 aa11.03□□□□□ -0.64
BCR-202ENST00000359540 ADM2Q7Z4H4 148 aa11.01□□□□□ -0.65
BCR-202ENST00000359540 ROMO1P60602 79 aa10.98□□□□□ -0.65
BCR-202ENST00000359540 ANK3Q12955 4377 aaKnown RBP10.96□□□□□ -0.66
BCR-202ENST00000359540 RPS29P62273 56 aaKnown RBP10.95□□□□□ -0.66
BCR-202ENST00000359540 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
BCR-202ENST00000359540 M0QZ58 72 aa10.84□□□□□ -0.67
BCR-202ENST00000359540 SRRM2Q9UQ35 2752 aaKnown RBP10.77□□□□□ -0.69
BCR-202ENST00000359540 A8MUU9 505 aa10.76□□□□□ -0.69
BCR-202ENST00000359540 FBN3Q75N90 2809 aa10.76□□□□□ -0.69
BCR-202ENST00000359540 ZNF469Q96JG9 3925 aaPredicted RBP10.74□□□□□ -0.69
BCR-202ENST00000359540 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
BCR-202ENST00000359540 KRTAP16-1A8MUX0 517 aa10.68□□□□□ -0.7
BCR-202ENST00000359540 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
BCR-202ENST00000359540 KRTAP13-3Q3SY46 172 aa10.57□□□□□ -0.72
BCR-202ENST00000359540 NDUFAF8A1L188 74 aa10.49□□□□□ -0.73
BCR-202ENST00000359540 H0YAA0 97 aa10.48□□□□□ -0.73
BCR-202ENST00000359540 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
BCR-202ENST00000359540 PLAC4Q8WY50 150 aa10.43□□□□□ -0.74
BCR-202ENST00000359540 COL7A1Q02388 2944 aa10.41□□□□□ -0.74
BCR-202ENST00000359540 XP32Q5T750 250 aa10.4□□□□□ -0.74
BCR-202ENST00000359540 AKAP9Q99996 3911 aa10.27□□□□□ -0.77
BCR-202ENST00000359540 C10orf95Q9H7T3 257 aa10.26□□□□□ -0.77
BCR-202ENST00000359540 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.77
BCR-202ENST00000359540 P0C880 135 aa10.18□□□□□ -0.78
BCR-202ENST00000359540 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
BCR-202ENST00000359540 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
BCR-202ENST00000359540 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
BCR-202ENST00000359540 TNP1P09430 55 aa10.05□□□□□ -0.8
BCR-202ENST00000359540 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
BCR-202ENST00000359540 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
BCR-202ENST00000359540 KRTAP12-2P59991 146 aa9.79□□□□□ -0.84
BCR-202ENST00000359540 PP632Q6XCG6 107 aa9.78□□□□□ -0.84
BCR-202ENST00000359540 DNAH9Q9NYC9 4486 aa9.76□□□□□ -0.85
BCR-202ENST00000359540 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
BCR-202ENST00000359540 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
BCR-202ENST00000359540 PLECQ15149 4684 aaKnown RBP9.65□□□□□ -0.87
BCR-202ENST00000359540 KRTAP12-1P59990 96 aa9.64□□□□□ -0.87
BCR-202ENST00000359540 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
BCR-202ENST00000359540 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
BCR-202ENST00000359540 DNHD1Q96M86 4753 aa9.57□□□□□ -0.88
BCR-202ENST00000359540 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
BCR-202ENST00000359540 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
BCR-202ENST00000359540 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.9
BCR-202ENST00000359540 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
BCR-202ENST00000359540 MT1HL1P0DM35 61 aa9.41□□□□□ -0.9
BCR-202ENST00000359540 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
BCR-202ENST00000359540 STARD9Q9P2P6 4700 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms