RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ITPR1Q14643 2758 aa6.9□□□□□ -1.3
DNMT1-202ENST00000359526 ATMQ13315 3056 aa6.88□□□□□ -1.31
DNMT1-202ENST00000359526 DMXL2Q8TDJ6 3036 aa6.87□□□□□ -1.31
DNMT1-202ENST00000359526 NSD1Q96L73 2696 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-202ENST00000359526 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
DNMT1-202ENST00000359526 FLNCQ14315 2725 aa6.84□□□□□ -1.31
DNMT1-202ENST00000359526 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.32
DNMT1-202ENST00000359526 ADGRG4Q8IZF6 3080 aa6.83□□□□□ -1.32
DNMT1-202ENST00000359526 A8MUU9 505 aa6.83□□□□□ -1.32
DNMT1-202ENST00000359526 KALRNO60229 2985 aa6.83□□□□□ -1.32
DNMT1-202ENST00000359526 NBEAQ8NFP9 2946 aa6.83□□□□□ -1.32
DNMT1-202ENST00000359526 COL12A1Q99715 3063 aa6.83□□□□□ -1.32
DNMT1-202ENST00000359526 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
DNMT1-202ENST00000359526 MUC3AQ02505 3323 aa6.8□□□□□ -1.32
DNMT1-202ENST00000359526 ASH1LQ9NR48 2969 aaKnown RBP6.77□□□□□ -1.33
DNMT1-202ENST00000359526 TACC2O95359 2948 aa6.77□□□□□ -1.33
DNMT1-202ENST00000359526 ZZEF1O43149 2961 aa6.73□□□□□ -1.33
DNMT1-202ENST00000359526 WDFY3Q8IZQ1 3526 aa6.73□□□□□ -1.33
DNMT1-202ENST00000359526 APCP25054 2843 aa6.73□□□□□ -1.33
DNMT1-202ENST00000359526 LRBAP50851 2863 aa6.71□□□□□ -1.34
DNMT1-202ENST00000359526 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
DNMT1-202ENST00000359526 DMDP11532 3685 aa6.68□□□□□ -1.34
DNMT1-202ENST00000359526 CFAP47Q6ZTR5 3102 aa6.67□□□□□ -1.34
DNMT1-202ENST00000359526 LOC400499M0QZD8 3231 aa6.65□□□□□ -1.35
DNMT1-202ENST00000359526 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
DNMT1-202ENST00000359526 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
DNMT1-202ENST00000359526 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
DNMT1-202ENST00000359526 HIVEP1P15822 2718 aa6.6□□□□□ -1.35
DNMT1-202ENST00000359526 DCHS1Q96JQ0 3298 aa6.59□□□□□ -1.35
DNMT1-202ENST00000359526 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
DNMT1-202ENST00000359526 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
DNMT1-202ENST00000359526 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
DNMT1-202ENST00000359526 TNP1P09430 55 aa6.55□□□□□ -1.36
DNMT1-202ENST00000359526 H0YAA0 97 aa6.54□□□□□ -1.36
DNMT1-202ENST00000359526 ZANQ9Y493 2812 aa6.52□□□□□ -1.37
DNMT1-202ENST00000359526 NIPBLQ6KC79 2804 aaeCLIP6.52□□□□□ -1.37
DNMT1-202ENST00000359526 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
DNMT1-202ENST00000359526 CELSR2Q9HCU4 2923 aa6.51□□□□□ -1.37
DNMT1-202ENST00000359526 HRNRQ86YZ3 2850 aaPredicted RBP6.49□□□□□ -1.37
DNMT1-202ENST00000359526 SPENQ96T58 3664 aaKnown RBP6.47□□□□□ -1.37
DNMT1-202ENST00000359526 XP32Q5T750 250 aa6.47□□□□□ -1.37
DNMT1-202ENST00000359526 P0C880 135 aa6.46□□□□□ -1.38
DNMT1-202ENST00000359526 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
DNMT1-202ENST00000359526 LAMA5O15230 3695 aa6.42□□□□□ -1.38
DNMT1-202ENST00000359526 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
DNMT1-202ENST00000359526 CRYBG3Q68DQ2 2970 aa6.41□□□□□ -1.38
DNMT1-202ENST00000359526 ASPMQ8IZT6 3477 aa6.4□□□□□ -1.38
DNMT1-202ENST00000359526 KRTAP10-8P60410 259 aa6.4□□□□□ -1.38
DNMT1-202ENST00000359526 DCHS2Q6V1P9 2916 aa6.38□□□□□ -1.39
DNMT1-202ENST00000359526 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
DNMT1-202ENST00000359526 RELNP78509 3460 aa6.38□□□□□ -1.39
DNMT1-202ENST00000359526 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
DNMT1-202ENST00000359526 NF1P21359 2839 aa6.35□□□□□ -1.39
DNMT1-202ENST00000359526 FBN2P35556 2912 aa6.32□□□□□ -1.4
DNMT1-202ENST00000359526 PDZD2O15018 2839 aa6.28□□□□□ -1.4
DNMT1-202ENST00000359526 TENM3Q9P273 2699 aa6.27□□□□□ -1.41
DNMT1-202ENST00000359526 TGP01266 2768 aa6.26□□□□□ -1.41
DNMT1-202ENST00000359526 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
DNMT1-202ENST00000359526 MXRA5Q9NR99 2828 aa6.19□□□□□ -1.42
DNMT1-202ENST00000359526 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
DNMT1-202ENST00000359526 OTOGQ6ZRI0 2925 aa6.12□□□□□ -1.43
DNMT1-202ENST00000359526 TENM1Q9UKZ4 2725 aa6.12□□□□□ -1.43
DNMT1-202ENST00000359526 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
DNMT1-202ENST00000359526 KRTAP12-2P59991 146 aa6.04□□□□□ -1.44
DNMT1-202ENST00000359526 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
DNMT1-202ENST00000359526 CELSR1Q9NYQ6 3014 aa6.04□□□□□ -1.44
DNMT1-202ENST00000359526 NBPF19A0A087WUL8 3843 aa6□□□□□ -1.45
DNMT1-202ENST00000359526 PKD1L1Q8TDX9 2849 aa5.99□□□□□ -1.45
DNMT1-202ENST00000359526 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
DNMT1-202ENST00000359526 CSMD1Q96PZ7 3565 aa5.97□□□□□ -1.45
DNMT1-202ENST00000359526 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
DNMT1-202ENST00000359526 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
DNMT1-202ENST00000359526 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
DNMT1-202ENST00000359526 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
DNMT1-202ENST00000359526 SVEP1Q4LDE5 3571 aa5.91□□□□□ -1.46
DNMT1-202ENST00000359526 VPS13CQ709C8 3753 aa5.91□□□□□ -1.46
DNMT1-202ENST00000359526 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.46
DNMT1-202ENST00000359526 FBN1P35555 2871 aaKnown RBP5.9□□□□□ -1.46
DNMT1-202ENST00000359526 SRRM2Q9UQ35 2752 aaKnown RBP5.89□□□□□ -1.47
DNMT1-202ENST00000359526 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
DNMT1-202ENST00000359526 CUBNO60494 3623 aa5.89□□□□□ -1.47
DNMT1-202ENST00000359526 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
DNMT1-202ENST00000359526 VWFP04275 2813 aa5.85□□□□□ -1.47
DNMT1-202ENST00000359526 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
DNMT1-202ENST00000359526 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
DNMT1-202ENST00000359526 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
DNMT1-202ENST00000359526 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
DNMT1-202ENST00000359526 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
DNMT1-202ENST00000359526 ZNF469Q96JG9 3925 aaPredicted RBP5.75□□□□□ -1.49
DNMT1-202ENST00000359526 INE1O15225 51 aa5.66□□□□□ -1.5
DNMT1-202ENST00000359526 FBN3Q75N90 2809 aa5.65□□□□□ -1.5
DNMT1-202ENST00000359526 MEGF8Q7Z7M0 2845 aa5.61□□□□□ -1.51
DNMT1-202ENST00000359526 TRRAPQ9Y4A5 3859 aa5.61□□□□□ -1.51
DNMT1-202ENST00000359526 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
DNMT1-202ENST00000359526 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
DNMT1-202ENST00000359526 COL7A1Q02388 2944 aa5.49□□□□□ -1.53
DNMT1-202ENST00000359526 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
DNMT1-202ENST00000359526 CMYA5Q8N3K9 4069 aa5.45□□□□□ -1.54
DNMT1-202ENST00000359526 ANK2Q01484 3957 aa5.43□□□□□ -1.54
DNMT1-202ENST00000359526 DNAH9Q9NYC9 4486 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms