RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
LDLRAD4-201ENST00000359446 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
LDLRAD4-201ENST00000359446 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
LDLRAD4-201ENST00000359446 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
LDLRAD4-201ENST00000359446 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
LDLRAD4-201ENST00000359446 ADGRG4Q8IZF6 3080 aa7.28□□□□□ -1.24
LDLRAD4-201ENST00000359446 ZZEF1O43149 2961 aa7.27□□□□□ -1.25
LDLRAD4-201ENST00000359446 FLNCQ14315 2725 aa7.25□□□□□ -1.25
LDLRAD4-201ENST00000359446 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
LDLRAD4-201ENST00000359446 A8MU10 97 aa7.23□□□□□ -1.25
LDLRAD4-201ENST00000359446 ATMQ13315 3056 aa7.23□□□□□ -1.25
LDLRAD4-201ENST00000359446 P0C880 135 aa7.22□□□□□ -1.25
LDLRAD4-201ENST00000359446 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
LDLRAD4-201ENST00000359446 TENM1Q9UKZ4 2725 aa7.19□□□□□ -1.26
LDLRAD4-201ENST00000359446 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
LDLRAD4-201ENST00000359446 EYSQ5T1H1 3165 aa7.17□□□□□ -1.26
LDLRAD4-201ENST00000359446 NF1P21359 2839 aa7.14□□□□□ -1.27
LDLRAD4-201ENST00000359446 SPTBN5Q9NRC6 3674 aaKnown RBP7.13□□□□□ -1.27
LDLRAD4-201ENST00000359446 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
LDLRAD4-201ENST00000359446 TNP1P09430 55 aa7.13□□□□□ -1.27
LDLRAD4-201ENST00000359446 DMXL1Q9Y485 3027 aa7.12□□□□□ -1.27
LDLRAD4-201ENST00000359446 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
LDLRAD4-201ENST00000359446 TNRC18O15417 2968 aaPredicted RBP7.11□□□□□ -1.27
LDLRAD4-201ENST00000359446 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
LDLRAD4-201ENST00000359446 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
LDLRAD4-201ENST00000359446 NDUFAF8A1L188 74 aa7.07□□□□□ -1.28
LDLRAD4-201ENST00000359446 A6NN06 94 aa7.05□□□□□ -1.28
LDLRAD4-201ENST00000359446 WDFY3Q8IZQ1 3526 aa7.04□□□□□ -1.28
LDLRAD4-201ENST00000359446 TENM4Q6N022 2769 aa7.04□□□□□ -1.28
LDLRAD4-201ENST00000359446 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
LDLRAD4-201ENST00000359446 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
LDLRAD4-201ENST00000359446 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
LDLRAD4-201ENST00000359446 CELSR1Q9NYQ6 3014 aa7□□□□□ -1.29
LDLRAD4-201ENST00000359446 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
LDLRAD4-201ENST00000359446 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
LDLRAD4-201ENST00000359446 FBN2P35556 2912 aa6.96□□□□□ -1.29
LDLRAD4-201ENST00000359446 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
LDLRAD4-201ENST00000359446 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
LDLRAD4-201ENST00000359446 ASPMQ8IZT6 3477 aa6.93□□□□□ -1.3
LDLRAD4-201ENST00000359446 LOC400499M0QZD8 3231 aa6.9□□□□□ -1.3
LDLRAD4-201ENST00000359446 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
LDLRAD4-201ENST00000359446 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
LDLRAD4-201ENST00000359446 TGP01266 2768 aa6.85□□□□□ -1.31
LDLRAD4-201ENST00000359446 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
LDLRAD4-201ENST00000359446 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
LDLRAD4-201ENST00000359446 VWFP04275 2813 aa6.82□□□□□ -1.32
LDLRAD4-201ENST00000359446 XP32Q5T750 250 aa6.81□□□□□ -1.32
LDLRAD4-201ENST00000359446 PDZD2O15018 2839 aa6.8□□□□□ -1.32
LDLRAD4-201ENST00000359446 KRTAP21-3Q3LHN1 58 aa6.79□□□□□ -1.32
LDLRAD4-201ENST00000359446 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
LDLRAD4-201ENST00000359446 HRNRQ86YZ3 2850 aaPredicted RBP6.78□□□□□ -1.32
LDLRAD4-201ENST00000359446 LAMA5O15230 3695 aa6.77□□□□□ -1.33
LDLRAD4-201ENST00000359446 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
LDLRAD4-201ENST00000359446 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
LDLRAD4-201ENST00000359446 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
LDLRAD4-201ENST00000359446 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
LDLRAD4-201ENST00000359446 H0YAA0 97 aa6.69□□□□□ -1.34
LDLRAD4-201ENST00000359446 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
LDLRAD4-201ENST00000359446 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
LDLRAD4-201ENST00000359446 RELNP78509 3460 aa6.62□□□□□ -1.35
LDLRAD4-201ENST00000359446 TENM2Q9NT68 2774 aa6.61□□□□□ -1.35
LDLRAD4-201ENST00000359446 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
LDLRAD4-201ENST00000359446 CSMD1Q96PZ7 3565 aa6.6□□□□□ -1.35
LDLRAD4-201ENST00000359446 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
LDLRAD4-201ENST00000359446 SPENQ96T58 3664 aaKnown RBP6.51□□□□□ -1.37
LDLRAD4-201ENST00000359446 SMG1Q96Q15 3661 aaKnown RBP6.49□□□□□ -1.37
LDLRAD4-201ENST00000359446 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.38
LDLRAD4-201ENST00000359446 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
LDLRAD4-201ENST00000359446 DMDP11532 3685 aa6.37□□□□□ -1.39
LDLRAD4-201ENST00000359446 CUBNO60494 3623 aa6.37□□□□□ -1.39
LDLRAD4-201ENST00000359446 FBN1P35555 2871 aaKnown RBP6.32□□□□□ -1.4
LDLRAD4-201ENST00000359446 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
LDLRAD4-201ENST00000359446 SVEP1Q4LDE5 3571 aa6.29□□□□□ -1.4
LDLRAD4-201ENST00000359446 MEGF8Q7Z7M0 2845 aa6.29□□□□□ -1.4
LDLRAD4-201ENST00000359446 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
LDLRAD4-201ENST00000359446 FBN3Q75N90 2809 aa6.22□□□□□ -1.41
LDLRAD4-201ENST00000359446 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
LDLRAD4-201ENST00000359446 KRTAP12-1P59990 96 aa6.15□□□□□ -1.43
LDLRAD4-201ENST00000359446 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
LDLRAD4-201ENST00000359446 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
LDLRAD4-201ENST00000359446 MUC3AQ02505 3323 aa6.11□□□□□ -1.43
LDLRAD4-201ENST00000359446 CSMD2Q7Z408 3487 aa6.06□□□□□ -1.44
LDLRAD4-201ENST00000359446 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
LDLRAD4-201ENST00000359446 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.46
LDLRAD4-201ENST00000359446 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
LDLRAD4-201ENST00000359446 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
LDLRAD4-201ENST00000359446 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
LDLRAD4-201ENST00000359446 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
LDLRAD4-201ENST00000359446 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
LDLRAD4-201ENST00000359446 INE1O15225 51 aa5.74□□□□□ -1.49
LDLRAD4-201ENST00000359446 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
LDLRAD4-201ENST00000359446 ANK3Q12955 4377 aaKnown RBP5.69□□□□□ -1.5
LDLRAD4-201ENST00000359446 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
LDLRAD4-201ENST00000359446 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
LDLRAD4-201ENST00000359446 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
LDLRAD4-201ENST00000359446 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
LDLRAD4-201ENST00000359446 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
LDLRAD4-201ENST00000359446 HUWE1Q7Z6Z7 4374 aaKnown RBP5.53□□□□□ -1.52
LDLRAD4-201ENST00000359446 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
LDLRAD4-201ENST00000359446 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms