RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
CSDE1-203ENST00000358528 TGP01266 2768 aa3.95□□□□□ -1.78
CSDE1-203ENST00000358528 C4orf48Q5BLP8 95 aa3.95□□□□□ -1.78
CSDE1-203ENST00000358528 Q75L30 129 aa3.95□□□□□ -1.78
CSDE1-203ENST00000358528 A0A1B0GU69 56 aa3.94□□□□□ -1.78
CSDE1-203ENST00000358528 LINC00313P59037 77 aa3.94□□□□□ -1.78
CSDE1-203ENST00000358528 C1orf134Q5TEV5 83 aa3.94□□□□□ -1.78
CSDE1-203ENST00000358528 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
CSDE1-203ENST00000358528 WWC2-AS2Q96NR7 200 aa3.93□□□□□ -1.78
CSDE1-203ENST00000358528 Q5W150 140 aa3.92□□□□□ -1.78
CSDE1-203ENST00000358528 Q96NJ1 140 aa3.92□□□□□ -1.78
CSDE1-203ENST00000358528 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
CSDE1-203ENST00000358528 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
CSDE1-203ENST00000358528 IGLV7-43P04211 117 aa3.9□□□□□ -1.78
CSDE1-203ENST00000358528 C7orf65Q6ZTY9 151 aa3.9□□□□□ -1.78
CSDE1-203ENST00000358528 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
CSDE1-203ENST00000358528 Q6ZR54 194 aa3.89□□□□□ -1.79
CSDE1-203ENST00000358528 KRTAP13-1Q8IUC0 172 aa3.89□□□□□ -1.79
CSDE1-203ENST00000358528 FAM229AH3BQW9 127 aa3.88□□□□□ -1.79
CSDE1-203ENST00000358528 Q6ZRN7 208 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-203ENST00000358528 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
CSDE1-203ENST00000358528 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
CSDE1-203ENST00000358528 LINC00483Q53H64 154 aa3.86□□□□□ -1.79
CSDE1-203ENST00000358528 ANK2Q01484 3957 aa3.86□□□□□ -1.79
CSDE1-203ENST00000358528 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
CSDE1-203ENST00000358528 Q8N1X5 172 aa3.85□□□□□ -1.79
CSDE1-203ENST00000358528 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
CSDE1-203ENST00000358528 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
CSDE1-203ENST00000358528 A6NN06 94 aa3.84□□□□□ -1.79
CSDE1-203ENST00000358528 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
CSDE1-203ENST00000358528 UQCR11O14957 56 aa3.84□□□□□ -1.8
CSDE1-203ENST00000358528 PLA2G1BP04054 148 aaKnown RBP3.83□□□□□ -1.8
CSDE1-203ENST00000358528 TYMSOSQ8TAI1 123 aa3.83□□□□□ -1.8
CSDE1-203ENST00000358528 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
CSDE1-203ENST00000358528 KRTAP10-2P60368 255 aa3.81□□□□□ -1.8
CSDE1-203ENST00000358528 DMBT1Q9UGM3 2413 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-203ENST00000358528 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
CSDE1-203ENST00000358528 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
CSDE1-203ENST00000358528 MEGF8Q7Z7M0 2845 aa3.8□□□□□ -1.8
CSDE1-203ENST00000358528 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-203ENST00000358528 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-203ENST00000358528 DMAC1Q96GE9 116 aa3.79□□□□□ -1.8
CSDE1-203ENST00000358528 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-203ENST00000358528 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
CSDE1-203ENST00000358528 LYSTQ99698 3801 aa3.78□□□□□ -1.8
CSDE1-203ENST00000358528 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CSDE1-203ENST00000358528 KRTAP10-1P60331 282 aa3.75□□□□□ -1.81
CSDE1-203ENST00000358528 DNHD1Q96M86 4753 aa3.75□□□□□ -1.81
CSDE1-203ENST00000358528 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
CSDE1-203ENST00000358528 CMYA5Q8N3K9 4069 aa3.74□□□□□ -1.81
CSDE1-203ENST00000358528 LINC00304Q8N9R0 145 aa3.73□□□□□ -1.81
CSDE1-203ENST00000358528 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
CSDE1-203ENST00000358528 K7ERS5 55 aa3.71□□□□□ -1.81
CSDE1-203ENST00000358528 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 DNAH9Q9NYC9 4486 aa3.71□□□□□ -1.82
CSDE1-203ENST00000358528 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CSDE1-203ENST00000358528 PLECQ15149 4684 aaKnown RBP3.66□□□□□ -1.82
CSDE1-203ENST00000358528 A0A0D9SG42 100 aa3.65□□□□□ -1.82
CSDE1-203ENST00000358528 KRTAP21-3Q3LHN1 58 aa3.65□□□□□ -1.82
CSDE1-203ENST00000358528 DNAH7Q8WXX0 4024 aa3.65□□□□□ -1.82
CSDE1-203ENST00000358528 KRTAP16-1A8MUX0 517 aa3.65□□□□□ -1.82
CSDE1-203ENST00000358528 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.83
CSDE1-203ENST00000358528 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
CSDE1-203ENST00000358528 DNAH3Q8TD57 4116 aa3.64□□□□□ -1.83
CSDE1-203ENST00000358528 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
CSDE1-203ENST00000358528 H3BS24 57 aa3.61□□□□□ -1.83
CSDE1-203ENST00000358528 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
CSDE1-203ENST00000358528 Q6ZSA8 131 aa3.6□□□□□ -1.83
CSDE1-203ENST00000358528 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.84
CSDE1-203ENST00000358528 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.84
CSDE1-203ENST00000358528 KMT2AQ03164 3969 aa3.58□□□□□ -1.84
CSDE1-203ENST00000358528 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
CSDE1-203ENST00000358528 H0YAA0 97 aa3.58□□□□□ -1.84
CSDE1-203ENST00000358528 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
CSDE1-203ENST00000358528 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-203ENST00000358528 DNAH11Q96DT5 4516 aa3.55□□□□□ -1.84
CSDE1-203ENST00000358528 DYNC2H1Q8NCM8 4307 aaKnown RBP3.54□□□□□ -1.84
CSDE1-203ENST00000358528 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CSDE1-203ENST00000358528 DNAH17Q9UFH2 4485 aa3.53□□□□□ -1.84
CSDE1-203ENST00000358528 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
CSDE1-203ENST00000358528 PRKDCP78527 4128 aaKnown RBP3.53□□□□□ -1.84
CSDE1-203ENST00000358528 A8MUU9 505 aa3.52□□□□□ -1.85
CSDE1-203ENST00000358528 VPS13DQ5THJ4 4388 aa3.51□□□□□ -1.85
CSDE1-203ENST00000358528 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
CSDE1-203ENST00000358528 DNAH6Q9C0G6 4158 aa3.5□□□□□ -1.85
CSDE1-203ENST00000358528 C20orf166-AS1Q96NR2 134 aa3.49□□□□□ -1.85
CSDE1-203ENST00000358528 KRTAP3-1Q9BYR8 98 aa3.49□□□□□ -1.85
CSDE1-203ENST00000358528 RPL37P61927 97 aaKnown RBP3.49□□□□□ -1.85
CSDE1-203ENST00000358528 J3QL48 77 aa3.49□□□□□ -1.85
CSDE1-203ENST00000358528 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
CSDE1-203ENST00000358528 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
CSDE1-203ENST00000358528 ROMO1P60602 79 aa3.48□□□□□ -1.85
CSDE1-203ENST00000358528 S4R3F8 94 aa3.48□□□□□ -1.85
CSDE1-203ENST00000358528 RPS29P62273 56 aaKnown RBP3.47□□□□□ -1.85
CSDE1-203ENST00000358528 RYR3Q15413 4870 aa3.47□□□□□ -1.85
CSDE1-203ENST00000358528 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms