RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
CNOT3-202ENST00000358389 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
CNOT3-202ENST00000358389 A0A1B0GU69 56 aa7.02□□□□□ -1.29
CNOT3-202ENST00000358389 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
CNOT3-202ENST00000358389 ACYP2P14621 99 aa6.99□□□□□ -1.29
CNOT3-202ENST00000358389 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
CNOT3-202ENST00000358389 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
CNOT3-202ENST00000358389 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
CNOT3-202ENST00000358389 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
CNOT3-202ENST00000358389 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
CNOT3-202ENST00000358389 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
CNOT3-202ENST00000358389 Q6ZR54 194 aa6.94□□□□□ -1.3
CNOT3-202ENST00000358389 A0A087X002 238 aa6.93□□□□□ -1.3
CNOT3-202ENST00000358389 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
CNOT3-202ENST00000358389 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
CNOT3-202ENST00000358389 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
CNOT3-202ENST00000358389 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
CNOT3-202ENST00000358389 A0A087WTM6 91 aa6.91□□□□□ -1.3
CNOT3-202ENST00000358389 Q96NJ1 140 aa6.91□□□□□ -1.3
CNOT3-202ENST00000358389 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
CNOT3-202ENST00000358389 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
CNOT3-202ENST00000358389 ZNF861PO60384 105 aa6.91□□□□□ -1.3
CNOT3-202ENST00000358389 SPRR1BP22528 89 aa6.91□□□□□ -1.3
CNOT3-202ENST00000358389 UQCR11O14957 56 aa6.9□□□□□ -1.31
CNOT3-202ENST00000358389 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
CNOT3-202ENST00000358389 COL7A1Q02388 2944 aa6.89□□□□□ -1.31
CNOT3-202ENST00000358389 Q5W150 140 aa6.88□□□□□ -1.31
CNOT3-202ENST00000358389 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
CNOT3-202ENST00000358389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
CNOT3-202ENST00000358389 KRTAP1-5Q9BYS1 174 aa6.84□□□□□ -1.31
CNOT3-202ENST00000358389 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
CNOT3-202ENST00000358389 DYNC2H1Q8NCM8 4307 aaKnown RBP6.81□□□□□ -1.32
CNOT3-202ENST00000358389 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
CNOT3-202ENST00000358389 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
CNOT3-202ENST00000358389 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
CNOT3-202ENST00000358389 PANO1I0J062 215 aa6.79□□□□□ -1.32
CNOT3-202ENST00000358389 J3QL48 77 aa6.79□□□□□ -1.32
CNOT3-202ENST00000358389 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
CNOT3-202ENST00000358389 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
CNOT3-202ENST00000358389 Q8N1X5 172 aa6.76□□□□□ -1.33
CNOT3-202ENST00000358389 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
CNOT3-202ENST00000358389 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
CNOT3-202ENST00000358389 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
CNOT3-202ENST00000358389 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
CNOT3-202ENST00000358389 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
CNOT3-202ENST00000358389 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.34
CNOT3-202ENST00000358389 LINC00483Q53H64 154 aa6.65□□□□□ -1.35
CNOT3-202ENST00000358389 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
CNOT3-202ENST00000358389 TGP01266 2768 aa6.61□□□□□ -1.35
CNOT3-202ENST00000358389 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
CNOT3-202ENST00000358389 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
CNOT3-202ENST00000358389 A0A0D9SG42 100 aa6.6□□□□□ -1.35
CNOT3-202ENST00000358389 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
CNOT3-202ENST00000358389 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CNOT3-202ENST00000358389 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
CNOT3-202ENST00000358389 ROMO1P60602 79 aa6.54□□□□□ -1.36
CNOT3-202ENST00000358389 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
CNOT3-202ENST00000358389 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
CNOT3-202ENST00000358389 A0A1B0GU33 70 aa6.49□□□□□ -1.37
CNOT3-202ENST00000358389 HECTD4Q9Y4D8 3996 aa6.49□□□□□ -1.37
CNOT3-202ENST00000358389 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
CNOT3-202ENST00000358389 Q6ZSA8 131 aa6.46□□□□□ -1.38
CNOT3-202ENST00000358389 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
CNOT3-202ENST00000358389 A8MUU9 505 aa6.45□□□□□ -1.38
CNOT3-202ENST00000358389 H0YAA0 97 aa6.45□□□□□ -1.38
CNOT3-202ENST00000358389 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
CNOT3-202ENST00000358389 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
CNOT3-202ENST00000358389 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
CNOT3-202ENST00000358389 ALMS1Q8TCU4 4167 aa6.4□□□□□ -1.38
CNOT3-202ENST00000358389 H1FX-AS1Q4G0G2 97 aa6.37□□□□□ -1.39
CNOT3-202ENST00000358389 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
CNOT3-202ENST00000358389 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
CNOT3-202ENST00000358389 HUWE1Q7Z6Z7 4374 aaKnown RBP6.35□□□□□ -1.39
CNOT3-202ENST00000358389 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
CNOT3-202ENST00000358389 KRTAP21-3Q3LHN1 58 aa6.35□□□□□ -1.39
CNOT3-202ENST00000358389 Q5VSD8 79 aa6.35□□□□□ -1.39
CNOT3-202ENST00000358389 DNAH17Q9UFH2 4485 aa6.32□□□□□ -1.4
CNOT3-202ENST00000358389 P0C880 135 aa6.31□□□□□ -1.4
CNOT3-202ENST00000358389 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
CNOT3-202ENST00000358389 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
CNOT3-202ENST00000358389 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
CNOT3-202ENST00000358389 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
CNOT3-202ENST00000358389 PKD1P98161 4303 aa6.22□□□□□ -1.41
CNOT3-202ENST00000358389 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.41
CNOT3-202ENST00000358389 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
CNOT3-202ENST00000358389 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
CNOT3-202ENST00000358389 M0R2T5 61 aa6.18□□□□□ -1.42
CNOT3-202ENST00000358389 S4R3F8 94 aa6.18□□□□□ -1.42
CNOT3-202ENST00000358389 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
CNOT3-202ENST00000358389 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
CNOT3-202ENST00000358389 PKHD1P08F94 4074 aa6.15□□□□□ -1.43
CNOT3-202ENST00000358389 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
CNOT3-202ENST00000358389 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
CNOT3-202ENST00000358389 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
CNOT3-202ENST00000358389 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
CNOT3-202ENST00000358389 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
CNOT3-202ENST00000358389 DNAH11Q96DT5 4516 aa6.12□□□□□ -1.43
CNOT3-202ENST00000358389 R4GN34 69 aa6.11□□□□□ -1.43
CNOT3-202ENST00000358389 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
CNOT3-202ENST00000358389 FAT2Q9NYQ8 4349 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms