RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 ZNF706Q9Y5V0 76 aaPredicted RBP4.59□□□□□ -1.67
CD46-204ENST00000357714 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.59□□□□□ -1.67
CD46-204ENST00000357714 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
CD46-204ENST00000357714 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
CD46-204ENST00000357714 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
CD46-204ENST00000357714 Q5W150 140 aa4.57□□□□□ -1.68
CD46-204ENST00000357714 ACYP2P14621 99 aa4.57□□□□□ -1.68
CD46-204ENST00000357714 NBDYA0A0U1RRE5 68 aa4.56□□□□□ -1.68
CD46-204ENST00000357714 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
CD46-204ENST00000357714 H3BS24 57 aa4.55□□□□□ -1.68
CD46-204ENST00000357714 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
CD46-204ENST00000357714 HUWE1Q7Z6Z7 4374 aaKnown RBP4.54□□□□□ -1.68
CD46-204ENST00000357714 CIRBP-AS1Q8TBR5 109 aa4.54□□□□□ -1.68
CD46-204ENST00000357714 LYSTQ99698 3801 aa4.54□□□□□ -1.68
CD46-204ENST00000357714 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
CD46-204ENST00000357714 A0A1B0GU69 56 aa4.53□□□□□ -1.68
CD46-204ENST00000357714 ZNF861PO60384 105 aa4.53□□□□□ -1.68
CD46-204ENST00000357714 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
CD46-204ENST00000357714 IGLV5-52A0A0A0MRZ9 124 aa4.53□□□□□ -1.68
CD46-204ENST00000357714 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
CD46-204ENST00000357714 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CD46-204ENST00000357714 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
CD46-204ENST00000357714 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
CD46-204ENST00000357714 A0A087WTM6 91 aa4.49□□□□□ -1.69
CD46-204ENST00000357714 RTL8CO15255 209 aa4.49□□□□□ -1.69
CD46-204ENST00000357714 PLA2G1BP04054 148 aaKnown RBP4.49□□□□□ -1.69
CD46-204ENST00000357714 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
CD46-204ENST00000357714 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
CD46-204ENST00000357714 UQCR11O14957 56 aa4.46□□□□□ -1.7
CD46-204ENST00000357714 NUPR2A6NF83 97 aa4.46□□□□□ -1.7
CD46-204ENST00000357714 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
CD46-204ENST00000357714 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
CD46-204ENST00000357714 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
CD46-204ENST00000357714 IGKV2D-30A0A075B6S6 120 aa4.44□□□□□ -1.7
CD46-204ENST00000357714 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
CD46-204ENST00000357714 SSBP3-AS1Q7Z2R9 100 aa4.44□□□□□ -1.7
CD46-204ENST00000357714 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CD46-204ENST00000357714 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
CD46-204ENST00000357714 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
CD46-204ENST00000357714 TGP01266 2768 aa4.41□□□□□ -1.7
CD46-204ENST00000357714 SPINK1P00995 79 aa4.4□□□□□ -1.7
CD46-204ENST00000357714 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.71
CD46-204ENST00000357714 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
CD46-204ENST00000357714 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
CD46-204ENST00000357714 MEGF8Q7Z7M0 2845 aa4.37□□□□□ -1.71
CD46-204ENST00000357714 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
CD46-204ENST00000357714 C1orf134Q5TEV5 83 aa4.36□□□□□ -1.71
CD46-204ENST00000357714 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
CD46-204ENST00000357714 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
CD46-204ENST00000357714 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
CD46-204ENST00000357714 Q8N1X5 172 aa4.34□□□□□ -1.71
CD46-204ENST00000357714 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
CD46-204ENST00000357714 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
CD46-204ENST00000357714 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
CD46-204ENST00000357714 LY6G6CO95867 125 aa4.3□□□□□ -1.72
CD46-204ENST00000357714 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
CD46-204ENST00000357714 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
CD46-204ENST00000357714 DNHD1Q96M86 4753 aa4.29□□□□□ -1.72
CD46-204ENST00000357714 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
CD46-204ENST00000357714 PRKDCP78527 4128 aaKnown RBP4.27□□□□□ -1.73
CD46-204ENST00000357714 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
CD46-204ENST00000357714 KMT2AQ03164 3969 aa4.27□□□□□ -1.73
CD46-204ENST00000357714 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
CD46-204ENST00000357714 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
CD46-204ENST00000357714 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
CD46-204ENST00000357714 Q6ZSA8 131 aa4.25□□□□□ -1.73
CD46-204ENST00000357714 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
CD46-204ENST00000357714 H0YAA0 97 aa4.24□□□□□ -1.73
CD46-204ENST00000357714 ROMO1P60602 79 aa4.24□□□□□ -1.73
CD46-204ENST00000357714 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
CD46-204ENST00000357714 A0A1B0GU33 70 aa4.23□□□□□ -1.73
CD46-204ENST00000357714 KRTAP10-1P60331 282 aa4.23□□□□□ -1.73
CD46-204ENST00000357714 A8MUU9 505 aa4.22□□□□□ -1.73
CD46-204ENST00000357714 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
CD46-204ENST00000357714 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
CD46-204ENST00000357714 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
CD46-204ENST00000357714 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
CD46-204ENST00000357714 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
CD46-204ENST00000357714 K7ERS5 55 aa4.18□□□□□ -1.74
CD46-204ENST00000357714 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
CD46-204ENST00000357714 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
CD46-204ENST00000357714 P0C880 135 aa4.15□□□□□ -1.74
CD46-204ENST00000357714 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
CD46-204ENST00000357714 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
CD46-204ENST00000357714 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
CD46-204ENST00000357714 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
CD46-204ENST00000357714 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
CD46-204ENST00000357714 SMR3BP02814 79 aaPredicted RBP4.08□□□□□ -1.76
CD46-204ENST00000357714 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
CD46-204ENST00000357714 A0A0D9SG42 100 aa4.05□□□□□ -1.76
CD46-204ENST00000357714 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
CD46-204ENST00000357714 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
CD46-204ENST00000357714 PKD1P98161 4303 aa4.04□□□□□ -1.76
CD46-204ENST00000357714 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
CD46-204ENST00000357714 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
CD46-204ENST00000357714 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
CD46-204ENST00000357714 HYDINQ4G0P3 5121 aa4□□□□□ -1.77
CD46-204ENST00000357714 TPRXLQ17RH7 258 aa4□□□□□ -1.77
CD46-204ENST00000357714 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
CD46-204ENST00000357714 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms