RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 NDUFS5O43920 106 aa14.68□□□□□ -0.06
HDGF-201ENST00000357325 FAT2Q9NYQ8 4349 aa14.67□□□□□ -0.06
HDGF-201ENST00000357325 PCOTHQ58A44 107 aa14.65□□□□□ -0.06
HDGF-201ENST00000357325 CDK2AP2O75956 126 aa14.65□□□□□ -0.07
HDGF-201ENST00000357325 SPANXA2-OT1Q8N9U9 137 aa14.61□□□□□ -0.07
HDGF-201ENST00000357325 KRTAP10-1P60331 282 aa14.6□□□□□ -0.07
HDGF-201ENST00000357325 MRPL34Q9BQ48 92 aaKnown RBP14.6□□□□□ -0.07
HDGF-201ENST00000357325 TP53AIP1Q9HCN2 124 aa14.58□□□□□ -0.08
HDGF-201ENST00000357325 CD164Q04900 197 aa14.58□□□□□ -0.08
HDGF-201ENST00000357325 BRK1Q8WUW1 75 aa14.57□□□□□ -0.08
HDGF-201ENST00000357325 Q1T7F1 81 aa14.56□□□□□ -0.08
HDGF-201ENST00000357325 PSPHP1O15172 72 aa14.55□□□□□ -0.08
HDGF-201ENST00000357325 PRO0628Q9UI54 55 aa14.53□□□□□ -0.08
HDGF-201ENST00000357325 KRTAP13-2Q52LG2 175 aa14.52□□□□□ -0.09
HDGF-201ENST00000357325 VPS13BQ7Z7G8 4022 aa14.51□□□□□ -0.09
HDGF-201ENST00000357325 IGLV7-46A0A075B6I9 117 aa14.49□□□□□ -0.09
HDGF-201ENST00000357325 Q5W150 140 aa14.49□□□□□ -0.09
HDGF-201ENST00000357325 Q6ZSA8 131 aa14.49□□□□□ -0.09
HDGF-201ENST00000357325 SSBP3-AS1Q7Z2R9 100 aa14.47□□□□□ -0.09
HDGF-201ENST00000357325 COA5Q86WW8 74 aa14.43□□□□□ -0.1
HDGF-201ENST00000357325 A8MUN3 132 aa14.42□□□□□ -0.1
HDGF-201ENST00000357325 Q8N9P0 234 aaPredicted RBP14.4□□□□□ -0.1
HDGF-201ENST00000357325 KRTAP13-3Q3SY46 172 aa14.38□□□□□ -0.11
HDGF-201ENST00000357325 PKHD1P08F94 4074 aa14.38□□□□□ -0.11
HDGF-201ENST00000357325 KRTAP1-4P0C5Y4 121 aa14.36□□□□□ -0.11
HDGF-201ENST00000357325 C1orf195Q5TG92 126 aa14.34□□□□□ -0.11
HDGF-201ENST00000357325 RETNLBQ9BQ08 111 aa14.32□□□□□ -0.12
HDGF-201ENST00000357325 Q5VV11 94 aa14.3□□□□□ -0.12
HDGF-201ENST00000357325 LINC00313P59037 77 aa14.27□□□□□ -0.12
HDGF-201ENST00000357325 A8MU10 97 aa14.26□□□□□ -0.13
HDGF-201ENST00000357325 HRES1P13985 223 aa14.26□□□□□ -0.13
HDGF-201ENST00000357325 SACSQ9NZJ4 4579 aa14.26□□□□□ -0.13
HDGF-201ENST00000357325 C8orf87E5RJ46 101 aa14.25□□□□□ -0.13
HDGF-201ENST00000357325 LOC101927531A0A1B0GV80 90 aa14.24□□□□□ -0.13
HDGF-201ENST00000357325 V9GYY9 64 aa14.24□□□□□ -0.13
HDGF-201ENST00000357325 PRR15LQ9BU68 103 aa14.23□□□□□ -0.13
HDGF-201ENST00000357325 PLA2G1BP04054 148 aaKnown RBP14.18□□□□□ -0.14
HDGF-201ENST00000357325 SPAG11AQ6PDA7 123 aa14.18□□□□□ -0.14
HDGF-201ENST00000357325 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
HDGF-201ENST00000357325 KRTAP16-1A8MUX0 517 aa14.17□□□□□ -0.14
HDGF-201ENST00000357325 CHKB-CPT1BH3BT56 60 aa14.13□□□□□ -0.15
HDGF-201ENST00000357325 DYNC1H1Q14204 4646 aaKnown RBP14.1□□□□□ -0.15
HDGF-201ENST00000357325 TYMSOSQ8TAI1 123 aa14.1□□□□□ -0.15
HDGF-201ENST00000357325 PRR26Q8N8Z3 221 aa14.09□□□□□ -0.15
HDGF-201ENST00000357325 FAM229AH3BQW9 127 aa14.07□□□□□ -0.16
HDGF-201ENST00000357325 SMR3BP02814 79 aaPredicted RBP14.07□□□□□ -0.16
HDGF-201ENST00000357325 FAT1Q14517 4588 aa14.04□□□□□ -0.16
HDGF-201ENST00000357325 C4orf48Q5BLP8 95 aa14.02□□□□□ -0.16
HDGF-201ENST00000357325 IGKV2-30P06310 120 aa14.02□□□□□ -0.17
HDGF-201ENST00000357325 LINC01558Q9Y6Z2 57 aa14.01□□□□□ -0.17
HDGF-201ENST00000357325 Q75L30 129 aa14□□□□□ -0.17
HDGF-201ENST00000357325 SPINK1P00995 79 aa13.95□□□□□ -0.18
HDGF-201ENST00000357325 LCA10Q71F78 164 aa13.95□□□□□ -0.18
HDGF-201ENST00000357325 IGKV2D-30A0A075B6S6 120 aa13.94□□□□□ -0.18
HDGF-201ENST00000357325 DMAC1Q96GE9 116 aa13.94□□□□□ -0.18
HDGF-201ENST00000357325 A6NED7 52 aa13.93□□□□□ -0.18
HDGF-201ENST00000357325 ACYP2P14621 99 aa13.93□□□□□ -0.18
HDGF-201ENST00000357325 KRTAP21-3Q3LHN1 58 aa13.92□□□□□ -0.18
HDGF-201ENST00000357325 APOBP04114 4563 aaKnown RBP13.92□□□□□ -0.18
HDGF-201ENST00000357325 LINC00304Q8N9R0 145 aa13.89□□□□□ -0.19
HDGF-201ENST00000357325 SPINK7P58062 85 aa13.86□□□□□ -0.19
HDGF-201ENST00000357325 A0A1B0GVY2 172 aa13.82□□□□□ -0.2
HDGF-201ENST00000357325 KRTAP10-4P60372 401 aaPredicted RBP13.79□□□□□ -0.2
HDGF-201ENST00000357325 RYR2Q92736 4967 aa13.79□□□□□ -0.2
HDGF-201ENST00000357325 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
HDGF-201ENST00000357325 SPTSSBQ8NFR3 76 aa13.78□□□□□ -0.2
HDGF-201ENST00000357325 KMT2CQ8NEZ4 4911 aaKnown RBP13.77□□□□□ -0.2
HDGF-201ENST00000357325 C9orf92A6NGG3 77 aa13.72□□□□□ -0.21
HDGF-201ENST00000357325 PMAIP1Q13794 54 aa13.72□□□□□ -0.21
HDGF-201ENST00000357325 CDC42SE1Q9NRR8 79 aa13.72□□□□□ -0.21
HDGF-201ENST00000357325 C7orf65Q6ZTY9 151 aa13.69□□□□□ -0.22
HDGF-201ENST00000357325 RPS29P62273 56 aaKnown RBP13.68□□□□□ -0.22
HDGF-201ENST00000357325 Q8N1X5 172 aa13.65□□□□□ -0.22
HDGF-201ENST00000357325 ATP11AUNQ6ZP68 121 aa13.62□□□□□ -0.23
HDGF-201ENST00000357325 A0A1B0GU69 56 aa13.56□□□□□ -0.24
HDGF-201ENST00000357325 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
HDGF-201ENST00000357325 A6NN06 94 aa13.5□□□□□ -0.25
HDGF-201ENST00000357325 A8MUU9 505 aa13.5□□□□□ -0.25
HDGF-201ENST00000357325 C20orf166-AS1Q96NR2 134 aa13.49□□□□□ -0.25
HDGF-201ENST00000357325 FLG2Q5D862 2391 aaPredicted RBP13.46□□□□□ -0.25
HDGF-201ENST00000357325 TNXBP22105 4242 aa13.41□□□□□ -0.26
HDGF-201ENST00000357325 KRTAP3-1Q9BYR8 98 aa13.38□□□□□ -0.27
HDGF-201ENST00000357325 FAT3Q8TDW7 4589 aa13.38□□□□□ -0.27
HDGF-201ENST00000357325 HSPG2P98160 4391 aa13.37□□□□□ -0.27
HDGF-201ENST00000357325 RYR3Q15413 4870 aa13.34□□□□□ -0.27
HDGF-201ENST00000357325 KTN1-AS1Q86SY8 53 aa13.33□□□□□ -0.28
HDGF-201ENST00000357325 SEC61GP60059 68 aa13.3□□□□□ -0.28
HDGF-201ENST00000357325 SPATA8Q6RVD6 105 aa13.29□□□□□ -0.28
HDGF-201ENST00000357325 KRTAP17-1Q9BYP8 105 aa13.27□□□□□ -0.29
HDGF-201ENST00000357325 MIR22HGQ0VDD5 57 aa13.25□□□□□ -0.29
HDGF-201ENST00000357325 UQCR11O14957 56 aa13.25□□□□□ -0.29
HDGF-201ENST00000357325 MYCBP2O75592 4640 aa13.21□□□□□ -0.29
HDGF-201ENST00000357325 Q5VSD8 79 aa13.21□□□□□ -0.3
HDGF-201ENST00000357325 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
HDGF-201ENST00000357325 RYR1P21817 5038 aa13.17□□□□□ -0.3
HDGF-201ENST00000357325 DMBT1Q9UGM3 2413 aaPredicted RBP13.17□□□□□ -0.3
HDGF-201ENST00000357325 KIAA1109Q2LD37 5005 aa13.09□□□□□ -0.31
HDGF-201ENST00000357325 ADM2Q7Z4H4 148 aa13.06□□□□□ -0.32
HDGF-201ENST00000357325 COX6B2Q6YFQ2 88 aa13.03□□□□□ -0.32
HDGF-201ENST00000357325 RBM12B-AS1Q9P1G2 102 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms