RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 IGLV5-48A0A075B6I7 105 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 IGKV3D-7A0A0C4DH55 119 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 H3BQ85 93 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 LST1O00453 97 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
LIG4-201ENST00000356922 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
LIG4-201ENST00000356922 PRR4Q16378 134 aa2.34□□□□□ -2.03
LIG4-201ENST00000356922 Q8NBF4 154 aa2.34□□□□□ -2.03
LIG4-201ENST00000356922 SPRR1BP22528 89 aa2.34□□□□□ -2.04
LIG4-201ENST00000356922 Q6JHZ5 121 aa2.33□□□□□ -2.04
LIG4-201ENST00000356922 MPLKIPQ8TAP9 179 aa2.33□□□□□ -2.04
LIG4-201ENST00000356922 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
LIG4-201ENST00000356922 FAM229BQ4G0N7 80 aa2.33□□□□□ -2.04
LIG4-201ENST00000356922 SSBP3-AS1Q7Z2R9 100 aa2.33□□□□□ -2.04
LIG4-201ENST00000356922 A0A087WVE0 104 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 JMJD7-PLA2G4BH0Y9G9 81 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 CCKP06307 115 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 SPAG11AQ6PDA7 123 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 C14orf132Q9NPU4 83 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 NDUFC1O43677 76 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 FP248Q71RG6 208 aaPredicted RBP2.32□□□□□ -2.04
LIG4-201ENST00000356922 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
LIG4-201ENST00000356922 A0A087WSZ3 146 aa2.31□□□□□ -2.04
LIG4-201ENST00000356922 SPINK1P00995 79 aa2.31□□□□□ -2.04
LIG4-201ENST00000356922 ATP5EP2Q5VTU8 51 aa2.31□□□□□ -2.04
LIG4-201ENST00000356922 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
LIG4-201ENST00000356922 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
LIG4-201ENST00000356922 H7BZZ5 65 aa2.3□□□□□ -2.04
LIG4-201ENST00000356922 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
LIG4-201ENST00000356922 PDE6GP18545 87 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 SNURFQ9Y675 71 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 A0A1W2PNM2 257 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 NREPQ16612 68 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 LINC00846Q9NV44 126 aa2.29□□□□□ -2.04
LIG4-201ENST00000356922 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
LIG4-201ENST00000356922 DEFB116Q30KQ4 102 aa2.28□□□□□ -2.04
LIG4-201ENST00000356922 NDUFB1O75438 58 aa2.28□□□□□ -2.04
LIG4-201ENST00000356922 IGLV7-46A0A075B6I9 117 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 TRBV7-4A0A0J9YYF1 115 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 OBSCN-AS1Q96MR7 158 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 RBM12B-AS1Q9P1G2 102 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 IGKV4-1P06312 121 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 FAT4Q6V0I7 4981 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
LIG4-201ENST00000356922 C9orf92A6NGG3 77 aa2.26□□□□□ -2.05
LIG4-201ENST00000356922 NDUFS5O43920 106 aa2.26□□□□□ -2.05
LIG4-201ENST00000356922 Q6ZQT0 140 aa2.26□□□□□ -2.05
LIG4-201ENST00000356922 IGHV6-1A0A0B4J1U7 121 aa2.25□□□□□ -2.05
LIG4-201ENST00000356922 BPY2O14599 106 aa2.25□□□□□ -2.05
LIG4-201ENST00000356922 Q96NJ1 140 aa2.25□□□□□ -2.05
LIG4-201ENST00000356922 SPTSSBQ8NFR3 76 aa2.25□□□□□ -2.05
LIG4-201ENST00000356922 PSPHP1O15172 72 aa2.24□□□□□ -2.05
LIG4-201ENST00000356922 TMEM254Q8TBM7 123 aa2.24□□□□□ -2.05
LIG4-201ENST00000356922 LOC110117498A0A087WWA1 95 aa2.23□□□□□ -2.05
LIG4-201ENST00000356922 Q6ZVQ6 151 aa2.23□□□□□ -2.05
LIG4-201ENST00000356922 NOTCH2NLQ7Z3S9 236 aa2.23□□□□□ -2.05
LIG4-201ENST00000356922 LINC00472Q9H8W2 130 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 MUC17Q685J3 4493 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 LINC00313P59037 77 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 RPS29P62273 56 aaKnown RBP2.22□□□□□ -2.05
LIG4-201ENST00000356922 Q1T7F1 81 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 A0A1B0GW54 56 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 C8orf87E5RJ46 101 aa2.22□□□□□ -2.05
LIG4-201ENST00000356922 CHKB-CPT1BH3BT56 60 aa2.21□□□□□ -2.06
LIG4-201ENST00000356922 DSCR10P59022 87 aa2.21□□□□□ -2.06
LIG4-201ENST00000356922 KRTAP13-3Q3SY46 172 aa2.21□□□□□ -2.06
LIG4-201ENST00000356922 WFDC13Q8IUB5 93 aa2.21□□□□□ -2.06
LIG4-201ENST00000356922 ATP11AUNQ6ZP68 121 aa2.21□□□□□ -2.06
LIG4-201ENST00000356922 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 LCA10Q71F78 164 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 Q8N9L7 120 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 CXCL6P80162 114 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 C7orf65Q6ZTY9 151 aa2.2□□□□□ -2.06
LIG4-201ENST00000356922 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
LIG4-201ENST00000356922 A8MUN3 132 aa2.19□□□□□ -2.06
LIG4-201ENST00000356922 A6NED7 52 aa2.19□□□□□ -2.06
LIG4-201ENST00000356922 A8MWP4 228 aa2.19□□□□□ -2.06
LIG4-201ENST00000356922 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
LIG4-201ENST00000356922 A0A1B0GVX0 72 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 XP32Q5T750 250 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 KRTAP4-1Q9BYQ7 146 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 K7EQZ3 153 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 CASC2Q6XLA1 102 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
LIG4-201ENST00000356922 SEC61BP60468 96 aaKnown RBP2.17□□□□□ -2.06
LIG4-201ENST00000356922 KRTAP16-1A8MUX0 517 aa2.17□□□□□ -2.06
LIG4-201ENST00000356922 PRR15LQ9BU68 103 aa2.17□□□□□ -2.06
LIG4-201ENST00000356922 C8orf17Q9NRJ1 99 aa2.17□□□□□ -2.06
LIG4-201ENST00000356922 CYP4F30PQ9H0H9 118 aa2.16□□□□□ -2.06
LIG4-201ENST00000356922 PCOTHQ58A44 107 aa2.15□□□□□ -2.06
LIG4-201ENST00000356922 Q5VV11 94 aa2.15□□□□□ -2.07
LIG4-201ENST00000356922 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.07
LIG4-201ENST00000356922 MRPL34Q9BQ48 92 aaKnown RBP2.15□□□□□ -2.07
LIG4-201ENST00000356922 LINC01554Q52M75 96 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms