RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 A0A087X002 238 aa8.31□□□□□ -1.08
ATN1-201ENST00000356654 UQCR11O14957 56 aa8.31□□□□□ -1.08
ATN1-201ENST00000356654 LINC00483Q53H64 154 aa8.31□□□□□ -1.08
ATN1-201ENST00000356654 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
ATN1-201ENST00000356654 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
ATN1-201ENST00000356654 TGP01266 2768 aa8.27□□□□□ -1.09
ATN1-201ENST00000356654 Q5VSD8 79 aa8.24□□□□□ -1.09
ATN1-201ENST00000356654 Q5W150 140 aa8.24□□□□□ -1.09
ATN1-201ENST00000356654 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
ATN1-201ENST00000356654 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
ATN1-201ENST00000356654 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
ATN1-201ENST00000356654 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
ATN1-201ENST00000356654 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
ATN1-201ENST00000356654 Q6ZSA8 131 aa8.18□□□□□ -1.1
ATN1-201ENST00000356654 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
ATN1-201ENST00000356654 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
ATN1-201ENST00000356654 SPINK7P58062 85 aa8.16□□□□□ -1.1
ATN1-201ENST00000356654 Q1T7F1 81 aa8.16□□□□□ -1.1
ATN1-201ENST00000356654 OXTP01178 125 aa8.14□□□□□ -1.11
ATN1-201ENST00000356654 A0A0D9SG42 100 aa8.12□□□□□ -1.11
ATN1-201ENST00000356654 Q5XG85 94 aa8.12□□□□□ -1.11
ATN1-201ENST00000356654 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
ATN1-201ENST00000356654 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
ATN1-201ENST00000356654 KRTAP21-3Q3LHN1 58 aa8.08□□□□□ -1.12
ATN1-201ENST00000356654 BSNQ9UPA5 3926 aa8.07□□□□□ -1.12
ATN1-201ENST00000356654 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
ATN1-201ENST00000356654 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
ATN1-201ENST00000356654 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
ATN1-201ENST00000356654 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
ATN1-201ENST00000356654 A0A1B0GU33 70 aa8□□□□□ -1.13
ATN1-201ENST00000356654 Q75L30 129 aa7.99□□□□□ -1.13
ATN1-201ENST00000356654 Q5VV11 94 aa7.98□□□□□ -1.13
ATN1-201ENST00000356654 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
ATN1-201ENST00000356654 TRRAPQ9Y4A5 3859 aa7.97□□□□□ -1.13
ATN1-201ENST00000356654 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
ATN1-201ENST00000356654 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
ATN1-201ENST00000356654 S4R3F8 94 aa7.9□□□□□ -1.14
ATN1-201ENST00000356654 KTN1-AS1Q86SY8 53 aa7.89□□□□□ -1.15
ATN1-201ENST00000356654 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
ATN1-201ENST00000356654 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
ATN1-201ENST00000356654 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
ATN1-201ENST00000356654 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
ATN1-201ENST00000356654 M0R2T5 61 aa7.84□□□□□ -1.15
ATN1-201ENST00000356654 KRTAP1-4P0C5Y4 121 aa7.83□□□□□ -1.16
ATN1-201ENST00000356654 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
ATN1-201ENST00000356654 LCA10Q71F78 164 aa7.77□□□□□ -1.17
ATN1-201ENST00000356654 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
ATN1-201ENST00000356654 PRAC1Q96KF2 57 aa7.73□□□□□ -1.17
ATN1-201ENST00000356654 R4GN34 69 aa7.73□□□□□ -1.17
ATN1-201ENST00000356654 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
ATN1-201ENST00000356654 VPS13CQ709C8 3753 aa7.68□□□□□ -1.18
ATN1-201ENST00000356654 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
ATN1-201ENST00000356654 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
ATN1-201ENST00000356654 A8MUU9 505 aa7.64□□□□□ -1.19
ATN1-201ENST00000356654 MEGF8Q7Z7M0 2845 aa7.64□□□□□ -1.19
ATN1-201ENST00000356654 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
ATN1-201ENST00000356654 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
ATN1-201ENST00000356654 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
ATN1-201ENST00000356654 M0QZ58 72 aa7.62□□□□□ -1.19
ATN1-201ENST00000356654 A8MU10 97 aa7.59□□□□□ -1.19
ATN1-201ENST00000356654 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
ATN1-201ENST00000356654 KRTAP16-1A8MUX0 517 aa7.51□□□□□ -1.21
ATN1-201ENST00000356654 XP32Q5T750 250 aa7.5□□□□□ -1.21
ATN1-201ENST00000356654 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
ATN1-201ENST00000356654 ROMO1P60602 79 aa7.44□□□□□ -1.22
ATN1-201ENST00000356654 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
ATN1-201ENST00000356654 A6NN06 94 aa7.36□□□□□ -1.23
ATN1-201ENST00000356654 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
ATN1-201ENST00000356654 TPRXLQ17RH7 258 aa7.31□□□□□ -1.24
ATN1-201ENST00000356654 LUZP6Q538Z0 58 aa7.27□□□□□ -1.25
ATN1-201ENST00000356654 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
ATN1-201ENST00000356654 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
ATN1-201ENST00000356654 AKAP9Q99996 3911 aa7.25□□□□□ -1.25
ATN1-201ENST00000356654 HUWE1Q7Z6Z7 4374 aaKnown RBP7.25□□□□□ -1.25
ATN1-201ENST00000356654 H0YAA0 97 aa7.16□□□□□ -1.26
ATN1-201ENST00000356654 KRTAP25-1Q3LHN0 102 aa7.14□□□□□ -1.27
ATN1-201ENST00000356654 P0C880 135 aa7.14□□□□□ -1.27
ATN1-201ENST00000356654 DNHD1Q96M86 4753 aa7.09□□□□□ -1.27
ATN1-201ENST00000356654 DNAH9Q9NYC9 4486 aa7.03□□□□□ -1.28
ATN1-201ENST00000356654 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
ATN1-201ENST00000356654 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
ATN1-201ENST00000356654 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
ATN1-201ENST00000356654 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
ATN1-201ENST00000356654 TNP1P09430 55 aa6.94□□□□□ -1.3
ATN1-201ENST00000356654 PLECQ15149 4684 aaKnown RBP6.93□□□□□ -1.3
ATN1-201ENST00000356654 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
ATN1-201ENST00000356654 H3BS24 57 aa6.88□□□□□ -1.31
ATN1-201ENST00000356654 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
ATN1-201ENST00000356654 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
ATN1-201ENST00000356654 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
ATN1-201ENST00000356654 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
ATN1-201ENST00000356654 DNAH10Q8IVF4 4471 aa6.77□□□□□ -1.33
ATN1-201ENST00000356654 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
ATN1-201ENST00000356654 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
ATN1-201ENST00000356654 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
ATN1-201ENST00000356654 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.33
ATN1-201ENST00000356654 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.34
ATN1-201ENST00000356654 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
ATN1-201ENST00000356654 FAT1Q14517 4588 aa6.68□□□□□ -1.34
ATN1-201ENST00000356654 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms