RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ASH1LQ9NR48 2969 aaKnown RBP6.39□□□□□ -1.39
GTF3C1-201ENST00000356183 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
GTF3C1-201ENST00000356183 LOC400499M0QZD8 3231 aa6.38□□□□□ -1.39
GTF3C1-201ENST00000356183 ITPR1Q14643 2758 aa6.38□□□□□ -1.39
GTF3C1-201ENST00000356183 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
GTF3C1-201ENST00000356183 A8MUU9 505 aa6.35□□□□□ -1.39
GTF3C1-201ENST00000356183 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.39
GTF3C1-201ENST00000356183 ZZEF1O43149 2961 aa6.34□□□□□ -1.39
GTF3C1-201ENST00000356183 FLNCQ14315 2725 aa6.33□□□□□ -1.4
GTF3C1-201ENST00000356183 UTP20O75691 2785 aaKnown RBP6.32□□□□□ -1.4
GTF3C1-201ENST00000356183 BAHCC1Q9P281 2608 aa6.31□□□□□ -1.4
GTF3C1-201ENST00000356183 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
GTF3C1-201ENST00000356183 CRYBG3Q68DQ2 2970 aa6.29□□□□□ -1.4
GTF3C1-201ENST00000356183 WDFY3Q8IZQ1 3526 aa6.28□□□□□ -1.4
GTF3C1-201ENST00000356183 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
GTF3C1-201ENST00000356183 APCP25054 2843 aa6.26□□□□□ -1.41
GTF3C1-201ENST00000356183 NSD1Q96L73 2696 aaPredicted RBP6.24□□□□□ -1.41
GTF3C1-201ENST00000356183 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
GTF3C1-201ENST00000356183 CELSR2Q9HCU4 2923 aa6.22□□□□□ -1.41
GTF3C1-201ENST00000356183 KMT2BQ9UMN6 2715 aaPredicted RBP6.22□□□□□ -1.41
GTF3C1-201ENST00000356183 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
GTF3C1-201ENST00000356183 TNP1P09430 55 aa6.2□□□□□ -1.42
GTF3C1-201ENST00000356183 HIVEP1P15822 2718 aa6.16□□□□□ -1.42
GTF3C1-201ENST00000356183 ASPMQ8IZT6 3477 aa6.16□□□□□ -1.42
GTF3C1-201ENST00000356183 ZANQ9Y493 2812 aa6.16□□□□□ -1.42
GTF3C1-201ENST00000356183 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.42
GTF3C1-201ENST00000356183 DCHS2Q6V1P9 2916 aa6.1□□□□□ -1.43
GTF3C1-201ENST00000356183 FBN2P35556 2912 aa6.09□□□□□ -1.44
GTF3C1-201ENST00000356183 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
GTF3C1-201ENST00000356183 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
GTF3C1-201ENST00000356183 DCHS1Q96JQ0 3298 aa6.07□□□□□ -1.44
GTF3C1-201ENST00000356183 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
GTF3C1-201ENST00000356183 RELNP78509 3460 aa6.05□□□□□ -1.44
GTF3C1-201ENST00000356183 HRNRQ86YZ3 2850 aaPredicted RBP6.04□□□□□ -1.44
GTF3C1-201ENST00000356183 NF1P21359 2839 aa6.04□□□□□ -1.44
GTF3C1-201ENST00000356183 LAMA5O15230 3695 aa6□□□□□ -1.45
GTF3C1-201ENST00000356183 KRTAP10-8P60410 259 aa6□□□□□ -1.45
GTF3C1-201ENST00000356183 NIPBLQ6KC79 2804 aaeCLIP5.99□□□□□ -1.45
GTF3C1-201ENST00000356183 H0YAA0 97 aa5.98□□□□□ -1.45
GTF3C1-201ENST00000356183 Q6ZRN7 208 aaPredicted RBP5.98□□□□□ -1.45
GTF3C1-201ENST00000356183 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
GTF3C1-201ENST00000356183 ZFHX4Q86UP3 3567 aa5.96□□□□□ -1.45
GTF3C1-201ENST00000356183 P0C880 135 aa5.96□□□□□ -1.46
GTF3C1-201ENST00000356183 A0A1B0GVY2 172 aa5.96□□□□□ -1.46
GTF3C1-201ENST00000356183 CELSR1Q9NYQ6 3014 aa5.95□□□□□ -1.46
GTF3C1-201ENST00000356183 TENM4Q6N022 2769 aa5.93□□□□□ -1.46
GTF3C1-201ENST00000356183 CSMD1Q96PZ7 3565 aa5.91□□□□□ -1.46
GTF3C1-201ENST00000356183 MUC3AQ02505 3323 aa5.9□□□□□ -1.46
GTF3C1-201ENST00000356183 DMDP11532 3685 aa5.89□□□□□ -1.47
GTF3C1-201ENST00000356183 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
GTF3C1-201ENST00000356183 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
GTF3C1-201ENST00000356183 TENM1Q9UKZ4 2725 aa5.8□□□□□ -1.48
GTF3C1-201ENST00000356183 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
GTF3C1-201ENST00000356183 XP32Q5T750 250 aa5.76□□□□□ -1.49
GTF3C1-201ENST00000356183 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
GTF3C1-201ENST00000356183 CUBNO60494 3623 aa5.69□□□□□ -1.5
GTF3C1-201ENST00000356183 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
GTF3C1-201ENST00000356183 SVEP1Q4LDE5 3571 aa5.69□□□□□ -1.5
GTF3C1-201ENST00000356183 PKD1L1Q8TDX9 2849 aa5.68□□□□□ -1.5
GTF3C1-201ENST00000356183 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
GTF3C1-201ENST00000356183 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
GTF3C1-201ENST00000356183 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
GTF3C1-201ENST00000356183 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
GTF3C1-201ENST00000356183 ZFHX3Q15911 3703 aa5.63□□□□□ -1.51
GTF3C1-201ENST00000356183 SPENQ96T58 3664 aaKnown RBP5.6□□□□□ -1.51
GTF3C1-201ENST00000356183 VWFP04275 2813 aa5.58□□□□□ -1.52
GTF3C1-201ENST00000356183 PDZD2O15018 2839 aa5.58□□□□□ -1.52
GTF3C1-201ENST00000356183 TENM2Q9NT68 2774 aa5.57□□□□□ -1.52
GTF3C1-201ENST00000356183 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
GTF3C1-201ENST00000356183 FBN1P35555 2871 aaKnown RBP5.54□□□□□ -1.52
GTF3C1-201ENST00000356183 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
GTF3C1-201ENST00000356183 TGP01266 2768 aa5.52□□□□□ -1.53
GTF3C1-201ENST00000356183 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
GTF3C1-201ENST00000356183 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
GTF3C1-201ENST00000356183 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
GTF3C1-201ENST00000356183 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
GTF3C1-201ENST00000356183 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
GTF3C1-201ENST00000356183 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
GTF3C1-201ENST00000356183 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
GTF3C1-201ENST00000356183 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
GTF3C1-201ENST00000356183 SRRM2Q9UQ35 2752 aaKnown RBP5.3□□□□□ -1.56
GTF3C1-201ENST00000356183 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
GTF3C1-201ENST00000356183 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
GTF3C1-201ENST00000356183 COL7A1Q02388 2944 aa5.27□□□□□ -1.57
GTF3C1-201ENST00000356183 INE1O15225 51 aa5.24□□□□□ -1.57
GTF3C1-201ENST00000356183 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
GTF3C1-201ENST00000356183 MEGF8Q7Z7M0 2845 aa5.22□□□□□ -1.57
GTF3C1-201ENST00000356183 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
GTF3C1-201ENST00000356183 ANK3Q12955 4377 aaKnown RBP5.18□□□□□ -1.58
GTF3C1-201ENST00000356183 ZNF469Q96JG9 3925 aaPredicted RBP5.07□□□□□ -1.6
GTF3C1-201ENST00000356183 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
GTF3C1-201ENST00000356183 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
GTF3C1-201ENST00000356183 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
GTF3C1-201ENST00000356183 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
GTF3C1-201ENST00000356183 AKAP9Q99996 3911 aa4.91□□□□□ -1.62
GTF3C1-201ENST00000356183 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
GTF3C1-201ENST00000356183 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
GTF3C1-201ENST00000356183 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
GTF3C1-201ENST00000356183 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
GTF3C1-201ENST00000356183 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms