RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
TRIM4-203ENST00000355947 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
TRIM4-203ENST00000355947 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
TRIM4-203ENST00000355947 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
TRIM4-203ENST00000355947 A0A1B0GU69 56 aa8.09□□□□□ -1.11
TRIM4-203ENST00000355947 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
TRIM4-203ENST00000355947 ZNF706Q9Y5V0 76 aaPredicted RBP8.08□□□□□ -1.12
TRIM4-203ENST00000355947 RTL8CO15255 209 aa8.08□□□□□ -1.12
TRIM4-203ENST00000355947 ACYP2P14621 99 aa8.07□□□□□ -1.12
TRIM4-203ENST00000355947 LINC00313P59037 77 aa8.07□□□□□ -1.12
TRIM4-203ENST00000355947 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
TRIM4-203ENST00000355947 Q6ZR54 194 aa8.07□□□□□ -1.12
TRIM4-203ENST00000355947 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
TRIM4-203ENST00000355947 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
TRIM4-203ENST00000355947 ZNF861PO60384 105 aa8.04□□□□□ -1.12
TRIM4-203ENST00000355947 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
TRIM4-203ENST00000355947 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
TRIM4-203ENST00000355947 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
TRIM4-203ENST00000355947 A0A087WTM6 91 aa8.02□□□□□ -1.12
TRIM4-203ENST00000355947 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
TRIM4-203ENST00000355947 MEGF8Q7Z7M0 2845 aa8□□□□□ -1.13
TRIM4-203ENST00000355947 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
TRIM4-203ENST00000355947 LY6G6CO95867 125 aa7.96□□□□□ -1.14
TRIM4-203ENST00000355947 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
TRIM4-203ENST00000355947 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
TRIM4-203ENST00000355947 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
TRIM4-203ENST00000355947 Q8N1X5 172 aa7.94□□□□□ -1.14
TRIM4-203ENST00000355947 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
TRIM4-203ENST00000355947 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
TRIM4-203ENST00000355947 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
TRIM4-203ENST00000355947 PLAC8Q9NZF1 115 aa7.92□□□□□ -1.14
TRIM4-203ENST00000355947 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
TRIM4-203ENST00000355947 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
TRIM4-203ENST00000355947 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
TRIM4-203ENST00000355947 UQCR11O14957 56 aa7.88□□□□□ -1.15
TRIM4-203ENST00000355947 FRAS1Q86XX4 4008 aa7.88□□□□□ -1.15
TRIM4-203ENST00000355947 DNAH1Q9P2D7 4330 aa7.86□□□□□ -1.15
TRIM4-203ENST00000355947 C1orf134Q5TEV5 83 aa7.86□□□□□ -1.15
TRIM4-203ENST00000355947 PLECQ15149 4684 aaKnown RBP7.86□□□□□ -1.15
TRIM4-203ENST00000355947 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
TRIM4-203ENST00000355947 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
TRIM4-203ENST00000355947 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
TRIM4-203ENST00000355947 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
TRIM4-203ENST00000355947 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
TRIM4-203ENST00000355947 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
TRIM4-203ENST00000355947 DNHD1Q96M86 4753 aa7.78□□□□□ -1.16
TRIM4-203ENST00000355947 KRTAP10-2P60368 255 aa7.77□□□□□ -1.16
TRIM4-203ENST00000355947 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.16
TRIM4-203ENST00000355947 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
TRIM4-203ENST00000355947 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
TRIM4-203ENST00000355947 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
TRIM4-203ENST00000355947 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
TRIM4-203ENST00000355947 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
TRIM4-203ENST00000355947 PLA2G1BP04054 148 aaKnown RBP7.73□□□□□ -1.17
TRIM4-203ENST00000355947 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.17
TRIM4-203ENST00000355947 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
TRIM4-203ENST00000355947 H3BS24 57 aa7.7□□□□□ -1.18
TRIM4-203ENST00000355947 KMT2AQ03164 3969 aa7.68□□□□□ -1.18
TRIM4-203ENST00000355947 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
TRIM4-203ENST00000355947 KRTAP10-1P60331 282 aa7.63□□□□□ -1.19
TRIM4-203ENST00000355947 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
TRIM4-203ENST00000355947 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
TRIM4-203ENST00000355947 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.2
TRIM4-203ENST00000355947 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
TRIM4-203ENST00000355947 DYNC2H1Q8NCM8 4307 aaKnown RBP7.54□□□□□ -1.2
TRIM4-203ENST00000355947 HECTD4Q9Y4D8 3996 aa7.53□□□□□ -1.2
TRIM4-203ENST00000355947 A0A1B0GU33 70 aa7.53□□□□□ -1.2
TRIM4-203ENST00000355947 DNAH2Q9P225 4427 aa7.53□□□□□ -1.2
TRIM4-203ENST00000355947 VPS13DQ5THJ4 4388 aa7.52□□□□□ -1.21
TRIM4-203ENST00000355947 Q6ZSA8 131 aa7.52□□□□□ -1.21
TRIM4-203ENST00000355947 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
TRIM4-203ENST00000355947 A0A0D9SG42 100 aa7.51□□□□□ -1.21
TRIM4-203ENST00000355947 H0YAA0 97 aa7.51□□□□□ -1.21
TRIM4-203ENST00000355947 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
TRIM4-203ENST00000355947 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
TRIM4-203ENST00000355947 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
TRIM4-203ENST00000355947 K7ERS5 55 aa7.46□□□□□ -1.22
TRIM4-203ENST00000355947 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
TRIM4-203ENST00000355947 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
TRIM4-203ENST00000355947 HYDINQ4G0P3 5121 aa7.38□□□□□ -1.23
TRIM4-203ENST00000355947 A8MUU9 505 aa7.37□□□□□ -1.23
TRIM4-203ENST00000355947 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
TRIM4-203ENST00000355947 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
TRIM4-203ENST00000355947 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
TRIM4-203ENST00000355947 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
TRIM4-203ENST00000355947 VPS13BQ7Z7G8 4022 aa7.3□□□□□ -1.24
TRIM4-203ENST00000355947 ROMO1P60602 79 aa7.29□□□□□ -1.24
TRIM4-203ENST00000355947 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
TRIM4-203ENST00000355947 FAT1Q14517 4588 aa7.23□□□□□ -1.25
TRIM4-203ENST00000355947 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
TRIM4-203ENST00000355947 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
TRIM4-203ENST00000355947 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
TRIM4-203ENST00000355947 C20orf166-AS1Q96NR2 134 aa7.15□□□□□ -1.26
TRIM4-203ENST00000355947 PKD1P98161 4303 aa7.14□□□□□ -1.27
TRIM4-203ENST00000355947 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
TRIM4-203ENST00000355947 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
TRIM4-203ENST00000355947 P0C880 135 aa7.09□□□□□ -1.27
TRIM4-203ENST00000355947 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
TRIM4-203ENST00000355947 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
TRIM4-203ENST00000355947 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms