RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 KRTAP21-3Q3LHN1 58 aa4.35□□□□□ -1.71
VANGL1-202ENST00000355485 H0YAA0 97 aa4.34□□□□□ -1.71
VANGL1-202ENST00000355485 NSD1Q96L73 2696 aaPredicted RBP4.34□□□□□ -1.71
VANGL1-202ENST00000355485 TEX15Q9BXT5 2789 aa4.34□□□□□ -1.71
VANGL1-202ENST00000355485 ZFHX4Q86UP3 3567 aa4.34□□□□□ -1.71
VANGL1-202ENST00000355485 KALRNO60229 2985 aa4.33□□□□□ -1.72
VANGL1-202ENST00000355485 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
VANGL1-202ENST00000355485 TEP1Q99973 2627 aaKnown RBP4.32□□□□□ -1.72
VANGL1-202ENST00000355485 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
VANGL1-202ENST00000355485 WDFY4Q6ZS81 3184 aa4.32□□□□□ -1.72
VANGL1-202ENST00000355485 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
VANGL1-202ENST00000355485 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
VANGL1-202ENST00000355485 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
VANGL1-202ENST00000355485 TNRC18O15417 2968 aaPredicted RBP4.29□□□□□ -1.72
VANGL1-202ENST00000355485 ZZEF1O43149 2961 aa4.29□□□□□ -1.72
VANGL1-202ENST00000355485 BOD1L1Q8NFC6 3051 aa4.29□□□□□ -1.72
VANGL1-202ENST00000355485 LOC400499M0QZD8 3231 aa4.28□□□□□ -1.72
VANGL1-202ENST00000355485 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
VANGL1-202ENST00000355485 DMXL2Q8TDJ6 3036 aa4.28□□□□□ -1.72
VANGL1-202ENST00000355485 COL6A3P12111 3177 aa4.27□□□□□ -1.73
VANGL1-202ENST00000355485 TACC2O95359 2948 aa4.27□□□□□ -1.73
VANGL1-202ENST00000355485 ADGRG4Q8IZF6 3080 aa4.27□□□□□ -1.73
VANGL1-202ENST00000355485 HRNRQ86YZ3 2850 aaPredicted RBP4.27□□□□□ -1.73
VANGL1-202ENST00000355485 MGAQ8IWI9 3026 aa4.26□□□□□ -1.73
VANGL1-202ENST00000355485 DCHS2Q6V1P9 2916 aa4.26□□□□□ -1.73
VANGL1-202ENST00000355485 MAP1AP78559 2803 aaPredicted RBP4.25□□□□□ -1.73
VANGL1-202ENST00000355485 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
VANGL1-202ENST00000355485 NIPBLQ6KC79 2804 aaeCLIP4.23□□□□□ -1.73
VANGL1-202ENST00000355485 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
VANGL1-202ENST00000355485 UBR5O95071 2799 aaPredicted RBP4.23□□□□□ -1.73
VANGL1-202ENST00000355485 NBEAL2Q6ZNJ1 2754 aa4.23□□□□□ -1.73
VANGL1-202ENST00000355485 Q6ZRN7 208 aaPredicted RBP4.22□□□□□ -1.73
VANGL1-202ENST00000355485 DCHS1Q96JQ0 3298 aa4.2□□□□□ -1.74
VANGL1-202ENST00000355485 ITPR1Q14643 2758 aa4.19□□□□□ -1.74
VANGL1-202ENST00000355485 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
VANGL1-202ENST00000355485 FLNCQ14315 2725 aa4.18□□□□□ -1.74
VANGL1-202ENST00000355485 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
VANGL1-202ENST00000355485 ATMQ13315 3056 aa4.16□□□□□ -1.74
VANGL1-202ENST00000355485 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
VANGL1-202ENST00000355485 APCP25054 2843 aa4.16□□□□□ -1.74
VANGL1-202ENST00000355485 LAMA5O15230 3695 aa4.16□□□□□ -1.74
VANGL1-202ENST00000355485 TPRXLQ17RH7 258 aa4.15□□□□□ -1.74
VANGL1-202ENST00000355485 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.75
VANGL1-202ENST00000355485 LRBAP50851 2863 aa4.15□□□□□ -1.75
VANGL1-202ENST00000355485 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.75
VANGL1-202ENST00000355485 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.76
VANGL1-202ENST00000355485 HIVEP1P15822 2718 aa4.08□□□□□ -1.76
VANGL1-202ENST00000355485 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
VANGL1-202ENST00000355485 RELNP78509 3460 aa4.06□□□□□ -1.76
VANGL1-202ENST00000355485 XP32Q5T750 250 aa4.06□□□□□ -1.76
VANGL1-202ENST00000355485 CELSR1Q9NYQ6 3014 aa4.06□□□□□ -1.76
VANGL1-202ENST00000355485 BSNQ9UPA5 3926 aa4.04□□□□□ -1.76
VANGL1-202ENST00000355485 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
VANGL1-202ENST00000355485 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
VANGL1-202ENST00000355485 ZANQ9Y493 2812 aa4.01□□□□□ -1.77
VANGL1-202ENST00000355485 MXRA5Q9NR99 2828 aa4□□□□□ -1.77
VANGL1-202ENST00000355485 COL12A1Q99715 3063 aa3.99□□□□□ -1.77
VANGL1-202ENST00000355485 CELSR2Q9HCU4 2923 aa3.99□□□□□ -1.77
VANGL1-202ENST00000355485 FBN2P35556 2912 aa3.98□□□□□ -1.77
VANGL1-202ENST00000355485 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
VANGL1-202ENST00000355485 TENM3Q9P273 2699 aa3.94□□□□□ -1.78
VANGL1-202ENST00000355485 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
VANGL1-202ENST00000355485 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
VANGL1-202ENST00000355485 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.78
VANGL1-202ENST00000355485 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
VANGL1-202ENST00000355485 CRYBG3Q68DQ2 2970 aa3.89□□□□□ -1.79
VANGL1-202ENST00000355485 NF1P21359 2839 aa3.87□□□□□ -1.79
VANGL1-202ENST00000355485 TGP01266 2768 aa3.85□□□□□ -1.79
VANGL1-202ENST00000355485 CUBNO60494 3623 aa3.83□□□□□ -1.8
VANGL1-202ENST00000355485 VWFP04275 2813 aa3.83□□□□□ -1.8
VANGL1-202ENST00000355485 VPS13CQ709C8 3753 aa3.83□□□□□ -1.8
VANGL1-202ENST00000355485 TENM1Q9UKZ4 2725 aa3.83□□□□□ -1.8
VANGL1-202ENST00000355485 INE1O15225 51 aa3.82□□□□□ -1.8
VANGL1-202ENST00000355485 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
VANGL1-202ENST00000355485 ZFHX3Q15911 3703 aa3.8□□□□□ -1.8
VANGL1-202ENST00000355485 CSMD2Q7Z408 3487 aa3.79□□□□□ -1.8
VANGL1-202ENST00000355485 PDZD2O15018 2839 aa3.79□□□□□ -1.8
VANGL1-202ENST00000355485 NBPF19A0A087WUL8 3843 aa3.76□□□□□ -1.81
VANGL1-202ENST00000355485 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
VANGL1-202ENST00000355485 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
VANGL1-202ENST00000355485 AKAP9Q99996 3911 aa3.73□□□□□ -1.81
VANGL1-202ENST00000355485 ANK3Q12955 4377 aaKnown RBP3.7□□□□□ -1.82
VANGL1-202ENST00000355485 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
VANGL1-202ENST00000355485 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
VANGL1-202ENST00000355485 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
VANGL1-202ENST00000355485 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
VANGL1-202ENST00000355485 KRTAP3-3Q9BYR6 98 aa3.61□□□□□ -1.83
VANGL1-202ENST00000355485 PKD1L1Q8TDX9 2849 aa3.61□□□□□ -1.83
VANGL1-202ENST00000355485 FBN1P35555 2871 aaKnown RBP3.6□□□□□ -1.83
VANGL1-202ENST00000355485 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
VANGL1-202ENST00000355485 ZNF469Q96JG9 3925 aaPredicted RBP3.59□□□□□ -1.83
VANGL1-202ENST00000355485 FBN3Q75N90 2809 aa3.58□□□□□ -1.84
VANGL1-202ENST00000355485 DNHD1Q96M86 4753 aa3.57□□□□□ -1.84
VANGL1-202ENST00000355485 DNAH1Q9P2D7 4330 aa3.56□□□□□ -1.84
VANGL1-202ENST00000355485 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
VANGL1-202ENST00000355485 LORP23490 312 aaPredicted RBP3.49□□□□□ -1.85
VANGL1-202ENST00000355485 HUWE1Q7Z6Z7 4374 aaKnown RBP3.49□□□□□ -1.85
VANGL1-202ENST00000355485 TRRAPQ9Y4A5 3859 aa3.47□□□□□ -1.85
VANGL1-202ENST00000355485 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
VANGL1-202ENST00000355485 MEGF8Q7Z7M0 2845 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms