RNA–Protein interactions for RNA: ENST00000355272.10

AP3D1-202, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3D1, Length 5,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-202ENST00000355272 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
AP3D1-202ENST00000355272 PKD1L1Q8TDX9 2849 aa9.95□□□□□ -0.82
AP3D1-202ENST00000355272 ZCCHC13Q8WW36 166 aaKnown RBP9.94□□□□□ -0.82
AP3D1-202ENST00000355272 KRTAP11-1Q8IUC1 163 aa9.92□□□□□ -0.82
AP3D1-202ENST00000355272 LCE6AA0A183 80 aa9.92□□□□□ -0.82
AP3D1-202ENST00000355272 ZFHX4Q86UP3 3567 aa9.92□□□□□ -0.82
AP3D1-202ENST00000355272 Q6ZR54 194 aa9.91□□□□□ -0.82
AP3D1-202ENST00000355272 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
AP3D1-202ENST00000355272 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
AP3D1-202ENST00000355272 CSAG1Q6PB30 78 aa9.9□□□□□ -0.82
AP3D1-202ENST00000355272 Q5VSD8 79 aa9.9□□□□□ -0.82
AP3D1-202ENST00000355272 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
AP3D1-202ENST00000355272 A0A087X002 238 aa9.88□□□□□ -0.83
AP3D1-202ENST00000355272 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
AP3D1-202ENST00000355272 LINC00483Q53H64 154 aa9.79□□□□□ -0.84
AP3D1-202ENST00000355272 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
AP3D1-202ENST00000355272 H3BS24 57 aa9.79□□□□□ -0.84
AP3D1-202ENST00000355272 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
AP3D1-202ENST00000355272 M0R2T5 61 aa9.78□□□□□ -0.84
AP3D1-202ENST00000355272 DMDP11532 3685 aa9.78□□□□□ -0.84
AP3D1-202ENST00000355272 DMAC1Q96GE9 116 aa9.77□□□□□ -0.84
AP3D1-202ENST00000355272 FBN1P35555 2871 aaKnown RBP9.74□□□□□ -0.85
AP3D1-202ENST00000355272 VWFP04275 2813 aa9.74□□□□□ -0.85
AP3D1-202ENST00000355272 A8MU10 97 aa9.71□□□□□ -0.85
AP3D1-202ENST00000355272 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
AP3D1-202ENST00000355272 S4R3F8 94 aa9.67□□□□□ -0.86
AP3D1-202ENST00000355272 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
AP3D1-202ENST00000355272 LUZP6Q538Z0 58 aa9.64□□□□□ -0.87
AP3D1-202ENST00000355272 PDZD2O15018 2839 aa9.63□□□□□ -0.87
AP3D1-202ENST00000355272 CUBNO60494 3623 aa9.61□□□□□ -0.87
AP3D1-202ENST00000355272 SPATA8Q6RVD6 105 aa9.59□□□□□ -0.87
AP3D1-202ENST00000355272 A6NN06 94 aa9.57□□□□□ -0.88
AP3D1-202ENST00000355272 CSMD1Q96PZ7 3565 aa9.56□□□□□ -0.88
AP3D1-202ENST00000355272 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
AP3D1-202ENST00000355272 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
AP3D1-202ENST00000355272 R4GN34 69 aa9.56□□□□□ -0.88
AP3D1-202ENST00000355272 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
AP3D1-202ENST00000355272 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
AP3D1-202ENST00000355272 TGP01266 2768 aa9.55□□□□□ -0.88
AP3D1-202ENST00000355272 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
AP3D1-202ENST00000355272 ZFHX3Q15911 3703 aa9.54□□□□□ -0.88
AP3D1-202ENST00000355272 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
AP3D1-202ENST00000355272 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
AP3D1-202ENST00000355272 ROMO1P60602 79 aa9.5□□□□□ -0.89
AP3D1-202ENST00000355272 SMG1Q96Q15 3661 aaKnown RBP9.5□□□□□ -0.89
AP3D1-202ENST00000355272 OTOGQ6ZRI0 2925 aa9.47□□□□□ -0.89
AP3D1-202ENST00000355272 SVEP1Q4LDE5 3571 aa9.44□□□□□ -0.9
AP3D1-202ENST00000355272 NBPF19A0A087WUL8 3843 aa9.43□□□□□ -0.9
AP3D1-202ENST00000355272 ASB16-AS1Q495Z4 193 aa9.42□□□□□ -0.9
AP3D1-202ENST00000355272 M0QZ58 72 aa9.4□□□□□ -0.9
AP3D1-202ENST00000355272 CSMD2Q7Z408 3487 aa9.35□□□□□ -0.91
AP3D1-202ENST00000355272 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
AP3D1-202ENST00000355272 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
AP3D1-202ENST00000355272 A0A0A0MQY5 61 aa9.21□□□□□ -0.94
AP3D1-202ENST00000355272 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
AP3D1-202ENST00000355272 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
AP3D1-202ENST00000355272 A8MUU9 505 aa9.08□□□□□ -0.96
AP3D1-202ENST00000355272 SPENQ96T58 3664 aaKnown RBP9.07□□□□□ -0.96
AP3D1-202ENST00000355272 NDUFAF8A1L188 74 aa9.05□□□□□ -0.96
AP3D1-202ENST00000355272 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
AP3D1-202ENST00000355272 FBN3Q75N90 2809 aa9.02□□□□□ -0.97
AP3D1-202ENST00000355272 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
AP3D1-202ENST00000355272 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
AP3D1-202ENST00000355272 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
AP3D1-202ENST00000355272 XP32Q5T750 250 aa8.92□□□□□ -0.98
AP3D1-202ENST00000355272 TRRAPQ9Y4A5 3859 aa8.91□□□□□ -0.98
AP3D1-202ENST00000355272 H0YAA0 97 aa8.88□□□□□ -0.99
AP3D1-202ENST00000355272 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
AP3D1-202ENST00000355272 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
AP3D1-202ENST00000355272 A0A1B0GVY2 172 aa8.77□□□□□ -1
AP3D1-202ENST00000355272 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
AP3D1-202ENST00000355272 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
AP3D1-202ENST00000355272 BSNQ9UPA5 3926 aa8.63□□□□□ -1.03
AP3D1-202ENST00000355272 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
AP3D1-202ENST00000355272 P0C880 135 aa8.59□□□□□ -1.03
AP3D1-202ENST00000355272 TNP1P09430 55 aa8.58□□□□□ -1.04
AP3D1-202ENST00000355272 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
AP3D1-202ENST00000355272 VPS13CQ709C8 3753 aa8.45□□□□□ -1.06
AP3D1-202ENST00000355272 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
AP3D1-202ENST00000355272 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
AP3D1-202ENST00000355272 CSMD3Q7Z407 3707 aa8.29□□□□□ -1.08
AP3D1-202ENST00000355272 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
AP3D1-202ENST00000355272 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
AP3D1-202ENST00000355272 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
AP3D1-202ENST00000355272 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
AP3D1-202ENST00000355272 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
AP3D1-202ENST00000355272 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
AP3D1-202ENST00000355272 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
AP3D1-202ENST00000355272 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
AP3D1-202ENST00000355272 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
AP3D1-202ENST00000355272 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
AP3D1-202ENST00000355272 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
AP3D1-202ENST00000355272 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
AP3D1-202ENST00000355272 AKAP9Q99996 3911 aa7.75□□□□□ -1.17
AP3D1-202ENST00000355272 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
AP3D1-202ENST00000355272 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
AP3D1-202ENST00000355272 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.18
AP3D1-202ENST00000355272 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
AP3D1-202ENST00000355272 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
AP3D1-202ENST00000355272 DNAH11Q96DT5 4516 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms