RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
GABPA-201ENST00000354828 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
GABPA-201ENST00000354828 KRTAP4-16G5E9R7 235 aaPredicted RBP5.67□□□□□ -1.5
GABPA-201ENST00000354828 KRTAP11-1Q8IUC1 163 aa5.67□□□□□ -1.5
GABPA-201ENST00000354828 TENM3Q9P273 2699 aa5.67□□□□□ -1.5
GABPA-201ENST00000354828 FBN1P35555 2871 aaKnown RBP5.67□□□□□ -1.5
GABPA-201ENST00000354828 Q5W150 140 aa5.66□□□□□ -1.5
GABPA-201ENST00000354828 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
GABPA-201ENST00000354828 PKD1L1Q8TDX9 2849 aa5.66□□□□□ -1.5
GABPA-201ENST00000354828 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
GABPA-201ENST00000354828 TENM2Q9NT68 2774 aa5.65□□□□□ -1.5
GABPA-201ENST00000354828 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.5
GABPA-201ENST00000354828 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
GABPA-201ENST00000354828 H7BZZ5 65 aa5.63□□□□□ -1.51
GABPA-201ENST00000354828 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
GABPA-201ENST00000354828 R4GN34 69 aa5.61□□□□□ -1.51
GABPA-201ENST00000354828 VWFP04275 2813 aa5.59□□□□□ -1.51
GABPA-201ENST00000354828 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.51
GABPA-201ENST00000354828 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
GABPA-201ENST00000354828 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
GABPA-201ENST00000354828 A0A1B0GU33 70 aa5.58□□□□□ -1.52
GABPA-201ENST00000354828 CSMD1Q96PZ7 3565 aa5.56□□□□□ -1.52
GABPA-201ENST00000354828 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
GABPA-201ENST00000354828 CSMD2Q7Z408 3487 aa5.54□□□□□ -1.52
GABPA-201ENST00000354828 TGP01266 2768 aa5.53□□□□□ -1.52
GABPA-201ENST00000354828 KRTAP13-1Q8IUC0 172 aa5.52□□□□□ -1.53
GABPA-201ENST00000354828 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
GABPA-201ENST00000354828 LCA10Q71F78 164 aa5.5□□□□□ -1.53
GABPA-201ENST00000354828 SPENQ96T58 3664 aaKnown RBP5.5□□□□□ -1.53
GABPA-201ENST00000354828 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
GABPA-201ENST00000354828 M0QZ58 72 aa5.49□□□□□ -1.53
GABPA-201ENST00000354828 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
GABPA-201ENST00000354828 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
GABPA-201ENST00000354828 Q75L30 129 aa5.47□□□□□ -1.53
GABPA-201ENST00000354828 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
GABPA-201ENST00000354828 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
GABPA-201ENST00000354828 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
GABPA-201ENST00000354828 BSNQ9UPA5 3926 aa5.45□□□□□ -1.54
GABPA-201ENST00000354828 Q5XG85 94 aa5.44□□□□□ -1.54
GABPA-201ENST00000354828 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
GABPA-201ENST00000354828 ADM2Q7Z4H4 148 aa5.44□□□□□ -1.54
GABPA-201ENST00000354828 SVEP1Q4LDE5 3571 aa5.41□□□□□ -1.54
GABPA-201ENST00000354828 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
GABPA-201ENST00000354828 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
GABPA-201ENST00000354828 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
GABPA-201ENST00000354828 Q1T7F1 81 aa5.38□□□□□ -1.55
GABPA-201ENST00000354828 A0A1B0GVY2 172 aa5.35□□□□□ -1.55
GABPA-201ENST00000354828 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
GABPA-201ENST00000354828 FBN3Q75N90 2809 aa5.35□□□□□ -1.55
GABPA-201ENST00000354828 XP32Q5T750 250 aa5.32□□□□□ -1.56
GABPA-201ENST00000354828 A8MUU9 505 aa5.31□□□□□ -1.56
GABPA-201ENST00000354828 TRRAPQ9Y4A5 3859 aa5.31□□□□□ -1.56
GABPA-201ENST00000354828 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
GABPA-201ENST00000354828 CUBNO60494 3623 aa5.28□□□□□ -1.56
GABPA-201ENST00000354828 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
GABPA-201ENST00000354828 SRRM2Q9UQ35 2752 aaKnown RBP5.26□□□□□ -1.57
GABPA-201ENST00000354828 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
GABPA-201ENST00000354828 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
GABPA-201ENST00000354828 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
GABPA-201ENST00000354828 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
GABPA-201ENST00000354828 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
GABPA-201ENST00000354828 Q5VV11 94 aa5.17□□□□□ -1.58
GABPA-201ENST00000354828 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
GABPA-201ENST00000354828 ROMO1P60602 79 aa5.15□□□□□ -1.59
GABPA-201ENST00000354828 COL7A1Q02388 2944 aa5.14□□□□□ -1.59
GABPA-201ENST00000354828 ZNF469Q96JG9 3925 aaPredicted RBP5.1□□□□□ -1.59
GABPA-201ENST00000354828 MEGF8Q7Z7M0 2845 aa5.09□□□□□ -1.59
GABPA-201ENST00000354828 A8MU10 97 aa5.08□□□□□ -1.6
GABPA-201ENST00000354828 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
GABPA-201ENST00000354828 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
GABPA-201ENST00000354828 AKAP9Q99996 3911 aa5.02□□□□□ -1.61
GABPA-201ENST00000354828 TNP1P09430 55 aa5.02□□□□□ -1.61
GABPA-201ENST00000354828 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
GABPA-201ENST00000354828 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
GABPA-201ENST00000354828 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
GABPA-201ENST00000354828 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
GABPA-201ENST00000354828 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
GABPA-201ENST00000354828 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
GABPA-201ENST00000354828 DNAH9Q9NYC9 4486 aa4.83□□□□□ -1.64
GABPA-201ENST00000354828 P0C880 135 aa4.82□□□□□ -1.64
GABPA-201ENST00000354828 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
GABPA-201ENST00000354828 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
GABPA-201ENST00000354828 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
GABPA-201ENST00000354828 PP632Q6XCG6 107 aa4.71□□□□□ -1.65
GABPA-201ENST00000354828 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.65
GABPA-201ENST00000354828 H0YAA0 97 aa4.7□□□□□ -1.66
GABPA-201ENST00000354828 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
GABPA-201ENST00000354828 A6NN06 94 aa4.67□□□□□ -1.66
GABPA-201ENST00000354828 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
GABPA-201ENST00000354828 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
GABPA-201ENST00000354828 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
GABPA-201ENST00000354828 PRKDCP78527 4128 aaKnown RBP4.63□□□□□ -1.67
GABPA-201ENST00000354828 ANK2Q01484 3957 aa4.6□□□□□ -1.67
GABPA-201ENST00000354828 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
GABPA-201ENST00000354828 STARD9Q9P2P6 4700 aa4.57□□□□□ -1.68
GABPA-201ENST00000354828 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
GABPA-201ENST00000354828 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
GABPA-201ENST00000354828 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
GABPA-201ENST00000354828 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
GABPA-201ENST00000354828 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms