RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 Q5W150 140 aa11.37□□□□□ -0.59
RNF38-202ENST00000350199 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
RNF38-202ENST00000350199 VWFP04275 2813 aa11.34□□□□□ -0.59
RNF38-202ENST00000350199 Q1T7F1 81 aa11.32□□□□□ -0.6
RNF38-202ENST00000350199 COX6B2Q6YFQ2 88 aa11.31□□□□□ -0.6
RNF38-202ENST00000350199 RBM12B-AS1Q9P1G2 102 aa11.3□□□□□ -0.6
RNF38-202ENST00000350199 MIR22HGQ0VDD5 57 aa11.3□□□□□ -0.6
RNF38-202ENST00000350199 CSMD2Q7Z408 3487 aa11.25□□□□□ -0.61
RNF38-202ENST00000350199 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
RNF38-202ENST00000350199 Q6ZSA8 131 aa11.24□□□□□ -0.61
RNF38-202ENST00000350199 FP248Q71RG6 208 aaPredicted RBP11.23□□□□□ -0.61
RNF38-202ENST00000350199 FBN1P35555 2871 aaKnown RBP11.22□□□□□ -0.61
RNF38-202ENST00000350199 Q5XG85 94 aa11.21□□□□□ -0.62
RNF38-202ENST00000350199 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
RNF38-202ENST00000350199 ANK3Q12955 4377 aaKnown RBP11.2□□□□□ -0.62
RNF38-202ENST00000350199 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
RNF38-202ENST00000350199 ASB16-AS1Q495Z4 193 aa11.19□□□□□ -0.62
RNF38-202ENST00000350199 SPINK7P58062 85 aa11.18□□□□□ -0.62
RNF38-202ENST00000350199 OXTP01178 125 aa11.18□□□□□ -0.62
RNF38-202ENST00000350199 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.62
RNF38-202ENST00000350199 CDC42SE1Q9NRR8 79 aa11.13□□□□□ -0.63
RNF38-202ENST00000350199 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
RNF38-202ENST00000350199 Q75L30 129 aa11.08□□□□□ -0.64
RNF38-202ENST00000350199 RPS29P62273 56 aaKnown RBP11.05□□□□□ -0.64
RNF38-202ENST00000350199 CUBNO60494 3623 aa11.05□□□□□ -0.64
RNF38-202ENST00000350199 DMAC1Q96GE9 116 aa11.04□□□□□ -0.64
RNF38-202ENST00000350199 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
RNF38-202ENST00000350199 A0A0D9SG42 100 aa11□□□□□ -0.65
RNF38-202ENST00000350199 Q5VV11 94 aa10.99□□□□□ -0.65
RNF38-202ENST00000350199 A0A1B0GU33 70 aa10.98□□□□□ -0.65
RNF38-202ENST00000350199 S4R3F8 94 aa10.93□□□□□ -0.66
RNF38-202ENST00000350199 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
RNF38-202ENST00000350199 PKD1L1Q8TDX9 2849 aa10.93□□□□□ -0.66
RNF38-202ENST00000350199 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
RNF38-202ENST00000350199 FLG2Q5D862 2391 aaPredicted RBP10.9□□□□□ -0.67
RNF38-202ENST00000350199 TGP01266 2768 aa10.89□□□□□ -0.67
RNF38-202ENST00000350199 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
RNF38-202ENST00000350199 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
RNF38-202ENST00000350199 SPINT4Q6UDR6 99 aa10.88□□□□□ -0.67
RNF38-202ENST00000350199 CSAG1Q6PB30 78 aa10.87□□□□□ -0.67
RNF38-202ENST00000350199 KRTAP1-4P0C5Y4 121 aa10.87□□□□□ -0.67
RNF38-202ENST00000350199 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
RNF38-202ENST00000350199 CRIPTQ9P021 101 aa10.77□□□□□ -0.69
RNF38-202ENST00000350199 LCA10Q71F78 164 aa10.68□□□□□ -0.7
RNF38-202ENST00000350199 M0R2T5 61 aa10.66□□□□□ -0.7
RNF38-202ENST00000350199 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
RNF38-202ENST00000350199 A8MUU9 505 aa10.63□□□□□ -0.71
RNF38-202ENST00000350199 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
RNF38-202ENST00000350199 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
RNF38-202ENST00000350199 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
RNF38-202ENST00000350199 R4GN34 69 aa10.57□□□□□ -0.72
RNF38-202ENST00000350199 CAMK2N1Q7Z7J9 78 aa10.53□□□□□ -0.72
RNF38-202ENST00000350199 A0A1B0GVY2 172 aa10.52□□□□□ -0.73
RNF38-202ENST00000350199 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
RNF38-202ENST00000350199 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
RNF38-202ENST00000350199 PRAC1Q96KF2 57 aa10.47□□□□□ -0.73
RNF38-202ENST00000350199 KRTAP16-1A8MUX0 517 aa10.47□□□□□ -0.73
RNF38-202ENST00000350199 AKAP9Q99996 3911 aa10.43□□□□□ -0.74
RNF38-202ENST00000350199 M0QZ58 72 aa10.42□□□□□ -0.74
RNF38-202ENST00000350199 XP32Q5T750 250 aa10.4□□□□□ -0.75
RNF38-202ENST00000350199 FBN3Q75N90 2809 aa10.35□□□□□ -0.75
RNF38-202ENST00000350199 HUWE1Q7Z6Z7 4374 aaKnown RBP10.33□□□□□ -0.76
RNF38-202ENST00000350199 MEGF8Q7Z7M0 2845 aa10.31□□□□□ -0.76
RNF38-202ENST00000350199 A8MU10 97 aa10.29□□□□□ -0.76
RNF38-202ENST00000350199 ROMO1P60602 79 aa10.26□□□□□ -0.77
RNF38-202ENST00000350199 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
RNF38-202ENST00000350199 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
RNF38-202ENST00000350199 TPRXLQ17RH7 258 aa10.21□□□□□ -0.78
RNF38-202ENST00000350199 A6NN06 94 aa10.18□□□□□ -0.78
RNF38-202ENST00000350199 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
RNF38-202ENST00000350199 COL7A1Q02388 2944 aa10.05□□□□□ -0.8
RNF38-202ENST00000350199 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
RNF38-202ENST00000350199 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
RNF38-202ENST00000350199 LUZP6Q538Z0 58 aa9.89□□□□□ -0.83
RNF38-202ENST00000350199 H0YAA0 97 aa9.87□□□□□ -0.83
RNF38-202ENST00000350199 KRTAP25-1Q3LHN0 102 aa9.84□□□□□ -0.83
RNF38-202ENST00000350199 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
RNF38-202ENST00000350199 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
RNF38-202ENST00000350199 P0C880 135 aa9.76□□□□□ -0.85
RNF38-202ENST00000350199 KRTAP10-4P60372 401 aaPredicted RBP9.73□□□□□ -0.85
RNF38-202ENST00000350199 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
RNF38-202ENST00000350199 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
RNF38-202ENST00000350199 MT1HL1P0DM35 61 aa9.65□□□□□ -0.86
RNF38-202ENST00000350199 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
RNF38-202ENST00000350199 DNHD1Q96M86 4753 aa9.63□□□□□ -0.87
RNF38-202ENST00000350199 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
RNF38-202ENST00000350199 DNAH10Q8IVF4 4471 aa9.54□□□□□ -0.88
RNF38-202ENST00000350199 TNP1P09430 55 aa9.54□□□□□ -0.88
RNF38-202ENST00000350199 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
RNF38-202ENST00000350199 STARD9Q9P2P6 4700 aa9.5□□□□□ -0.89
RNF38-202ENST00000350199 ANK2Q01484 3957 aa9.48□□□□□ -0.89
RNF38-202ENST00000350199 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
RNF38-202ENST00000350199 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
RNF38-202ENST00000350199 KRTAP10-10P60014 251 aa9.46□□□□□ -0.9
RNF38-202ENST00000350199 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
RNF38-202ENST00000350199 DNAH17Q9UFH2 4485 aa9.4□□□□□ -0.9
RNF38-202ENST00000350199 PRKDCP78527 4128 aaKnown RBP9.4□□□□□ -0.9
RNF38-202ENST00000350199 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
RNF38-202ENST00000350199 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
RNF38-202ENST00000350199 H3BS24 57 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms